Factsheet for PGSC0003DMT400035898

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
vacuole 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400040141
PGSC0003DMT400040142
PGSC0003DMT400040143
PGSC0003DMT400040144
PGSC0003DMT400040206
PGSC0003DMT400040207
PGSC0003DMT400077934

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60160.1	PGSC0003DMT400040141	AT3G46090.1	17259181
AT1G60160.1	PGSC0003DMT400040142	AT3G46090.1	17259181
AT1G60160.1	PGSC0003DMT400040143	AT3G46090.1	17259181
AT1G60160.1	PGSC0003DMT400040144	AT3G46090.1	17259181
AT1G60160.1	PGSC0003DMT400040206	AT3G46090.1	17259181
AT1G60160.1	PGSC0003DMT400040207	AT3G46090.1	17259181
AT1G60160.1	PGSC0003DMT400077934	AT3G46090.1	17259181

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g025990.2.1	Tomato	cytosol, peroxisome, plasma membrane	98.11	97.88
VIT_01s0026g00260.t01	Wine grape	cytosol, peroxisome, plasma membrane	76.77	78.15
GSMUA_Achr7P20060_001	Banana	unclear	71.82	75.84
AT1G60160.1	Thale cress	cytosol, peroxisome, plasma membrane	73.0	74.85
KRH45699	Soybean	cytosol, nucleus, plasma membrane	73.94	74.55
Zm00001d020325_P001	Maize	cytosol, peroxisome, plasma membrane	69.22	68.9
EER98827	Sorghum	cytosol, peroxisome, plasma membrane	68.87	68.54
CDY54954	Canola	cytosol, peroxisome, plasma membrane	72.29	68.19
TraesCS5A01G198700.1	Wheat	nucleus	64.74	67.44
Os09t0376900-01	Rice	plasma membrane	68.75	66.48
Bra031523.1-P	Field mustard	cytosol, peroxisome, plasma membrane	72.29	64.73
TraesCS5D01G204600.1	Wheat	mitochondrion	68.28	64.48
CDY24518	Canola	cytosol, peroxisome, plasma membrane	72.29	64.19
TraesCS5B01G197300.2	Wheat	nucleus	67.92	62.88
HORVU5Hr1G059200.3	Barley	mitochondrion, peroxisome	67.69	57.0
PGSC0003DMT400042977	Potato	cytosol, golgi, plastid	17.45	55.85
PGSC0003DMT400032781	Potato	cytosol, peroxisome, plasma membrane	54.72	54.65
PGSC0003DMT400035722	Potato	cytosol, peroxisome, plasma membrane	43.99	47.58
PGSC0003DMT400029616	Potato	peroxisome	41.39	47.11
PGSC0003DMT400046034	Potato	plasma membrane	43.16	46.68
PGSC0003DMT400001329	Potato	cytosol, golgi, plasma membrane	41.75	45.85
PGSC0003DMT400010525	Potato	plasma membrane	41.39	45.06
PGSC0003DMT400027038	Potato	peroxisome, plasma membrane, vacuole	41.98	44.95
PGSC0003DMT400062466	Potato	plasma membrane	40.8	43.8
PGSC0003DMT400035889	Potato	plasma membrane	25.24	43.32
PGSC0003DMT400052541	Potato	plasma membrane	40.21	43.06
PGSC0003DMT400075514	Potato	cytosol, peroxisome, plasma membrane	39.39	40.83
PGSC0003DMT400064964	Potato	cytosol, peroxisome, plasma membrane	38.92	40.39
PGSC0003DMT400051127	Potato	plasma membrane	32.08	35.65

Protein Annotations

EntrezGene:102586097	MapMan:24.2.3.11	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813
GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0015079	GO:GO:0016020
GO:GO:0016021	GO:GO:0071805	InterPro:K+_transporter	UniProt:M1B2Z4	PFAM:PF02705	EnsemblPlantsGene:PGSC0003DMG400013821
PGSC:PGSC0003DMG400013821	EnsemblPlants:PGSC0003DMT400035898	PANTHER:PTHR30540	PANTHER:PTHR30540:SF4	TIGRFAMs:TIGR00794	TMHMM:TMhelix
UniParc:UPI000295DF94	RefSeq:XP_006340114.1	SEG:seg	:	:	:

Description

Potassium transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400013821]

Coordinates

chr4:+:22319412..22327197

Molecular Weight (calculated)

93985.3 Da

IEP (calculated)

7.036

GRAVY (calculated)

0.329

Length

848 amino acids

Sequence
(BLAST)

001: MGEEEIEEEN SNRVGLLRRC TTGGSTGSTR WVDGSEVDSE SSPSWSLFGD EEIVKQGYGS VRRRLVKKPK RLDSFDVEAM EISVAHGSHH KKEASLLSTL
101: ALAFQTLGVV YGDMGTSPLY VFSGVFSKVP ITSEVDVLGA LSIVLYTIAL IPLMKYVFIV LKANDSGEGG TFALYSLICR YANVNLLPNR QPADEHISSF
201: KLKLPTPELQ RALNIKEVLE RKSSLKTLVL LLVLMGTSMI IGDGILTPAI SVMSAVSGLQ GRVPGFGTNA LVFTSIIILG VLFSIQRYGS SKVGFTFAPA
301: LALWFFSLGA IGVYNLLKHD VTVLRALNPA YIYLFFKKNS INGWSALGGC VLCITGAEAM FADLGHFSVK SIQIAFTSVV FPCLFLAYFG QAAYLMKFPN
401: SSERIFYDSV PDGLFWPVFG LATVAAIIAS QAMISASFSC VKQAMALGCF PRLKIIHTSK RHMGQIYIPV INWFLMIMCM LVVAAFQSTT DISNAYGIAE
501: VGVMMVSTTL VTVVMLLIWQ TNLFLAILFP LIFGTIELIY MSAVLSKIFE GGWLPLVFAS WFLCVMYIWN YGSVLKYQSE VKQKISMDFM HELGSSLGTV
601: RVPGIGLLYN ELVQGIPSIF AQFLLDLPAI HSVIVFVCIK YVPVPVVPQE ERFLFRRVGP KDYHMFRCVA RYGYKDVRKE DHHAFEQLLV DSLEKFLRKE
701: ALDVALEINL NQPDLDSISV RSRDESEIQD GDGDGMDELK IPLMRDQRME TSGASTSEAS LTLPASVMPV DEDPSLEYEL SALREATESG FTYLLGHGDV
801: RAKKNSWFIK KLSINYFYAF MRKNCRGGAA TMRVPHMNII QVGMTYMV

Best Arabidopsis Sequence Match ( AT1G60160.1 )
(BLAST)

001: MEEIEEGSSN NSIRRVGTGS SDRRWVDGSE VDSETPLFSE IRDRDYSFGN LRRRLMKKPK RADSLDVEAM EIAGSHGHNL KDLSLLTTLG IAFQTLGVVY
101: GDMGTSPLYV FSDVFSKVPI RSEVDVLGAL SLVIYTIAVI PLAKYVFVVL KANDNGEGGT FALYSLICRY AKVNKLPNQQ PADEQISSFR LKLPTPELER
201: ALGIKEALET KGYLKTLLLL LVLMGTSMII GDGILTPAMS VMSAMSGLQG EVKGFGTNAL VMSSIVILVA LFSIQRFGTG KVGFLFAPVL ALWFFSLGAI
301: GIYNLLKYDF TVIRALNPFY IVLFFNKNSK QAWSALGGCV LCITGAEAMF ADLGHFSVRS IQMAFTCVVF PCLLLAYMGQ AAYLTKHPEA SARIFYDSVP
401: KSLFWPVFVI ATLAAMIASQ AMISATFSCV KQAMALGCFP RLKIIHTSKK RIGQIYIPVI NWFLMIMCIL VVSIFRSTTH IANAYGIAEV GVMMVSTVLV
501: TLVMLLIWQT NIFLALCFPL IFGSVETIYL LAVLTKILEG GWVPLVFATF FLTVMYIWNY GSVLKYQSEV RERISMDFMR ELGSTLGTIR IPGIGLLYNE
601: LVQGIPSIFG QFLLTLPAIH STIIFVCIKY VPVPVVPQEE RFLFRRVCPK DYHMFRCIAR YGYKDVRKED SRVFEQLLIE SLEKFLRCEA LEDALESTLN
701: DFDPDRVSVA SDTYTDDLMA PLIHRAKRSE PEQELDSEVL PSSSVGSSME EDPALEYELA ALREATDSGL TYLLAHGDVR AKKNSIFVKK LVINYFYAFL
801: RRNCRAGAAN LTVPHMNILQ AGMTYMV

Arabidopsis Description

POT12Putative potassium transporter 12 [Source:UniProtKB/Swiss-Prot;Acc:O80739]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.