CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
vacuole 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH10294
KRH23029
KRH24840
KRH29844

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60160.1	KRH10294	AT3G46090.1	17259181
AT1G60160.1	KRH23029	AT3G46090.1	17259181
AT1G60160.1	KRH24840	AT3G46090.1	17259181
AT1G60160.1	KRH29844	AT3G46090.1	17259181

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0026g00260.t01	Wine grape	cytosol, peroxisome, plasma membrane	77.29	78.03
GSMUA_Achr7P20060_001	Banana	unclear	73.13	76.59
AT1G60160.1	Thale cress	cytosol, peroxisome, plasma membrane	74.08	75.33
PGSC0003DMT400035898	Potato	cytosol, peroxisome, plasma membrane	74.55	73.94
Solyc04g025990.2.1	Tomato	cytosol, peroxisome, plasma membrane	74.67	73.88
Solyc05g005720.2.1	Tomato	cytosol, peroxisome, plasma membrane	71.11	71.53
Zm00001d020325_P001	Maize	cytosol, peroxisome, plasma membrane	70.39	69.48
EER98827	Sorghum	cytosol, peroxisome, plasma membrane	69.92	69.01
CDY54954	Canola	cytosol, peroxisome, plasma membrane	73.72	68.97
TraesCS5A01G198700.1	Wheat	nucleus	66.71	68.92
Os09t0376900-01	Rice	plasma membrane	69.8	66.93
TraesCS5D01G204600.1	Wheat	mitochondrion	70.04	65.59
Bra031523.1-P	Field mustard	cytosol, peroxisome, plasma membrane	73.72	65.47
CDY24518	Canola	cytosol, peroxisome, plasma membrane	73.48	64.71
TraesCS5B01G197300.2	Wheat	nucleus	70.04	64.3
HORVU5Hr1G059200.3	Barley	mitochondrion, peroxisome	69.56	58.09
KRH10537	Soybean	nucleus	55.77	55.77
KRH58275	Soybean	cytosol, nucleus, plasma membrane	56.0	55.67
KRH43903	Soybean	nucleus	55.53	55.46
KRH42159	Soybean	cytosol, peroxisome, plasma membrane	55.77	55.37
KRH69024	Soybean	cytosol, peroxisome, plasma membrane	34.6	49.74
KRH12204	Soybean	plasma membrane	42.33	47.53
KRG97298	Soybean	mitochondrion	44.83	47.36
KRH37223	Soybean	plasma membrane	43.4	46.2
KRH58500	Soybean	plasma membrane	43.04	45.76
KRG94740	Soybean	plasma membrane	42.45	45.48
KRH06789	Soybean	mitochondrion	42.45	45.48
KRH47652	Soybean	cytosol, peroxisome, plasma membrane	43.4	45.4
KRG99315	Soybean	plasma membrane	41.26	44.49
KRH08428	Soybean	plasma membrane	41.5	44.46
KRG93348	Soybean	plasma membrane	41.14	44.36
KRH20327	Soybean	plasma membrane	41.02	44.29
KRH42381	Soybean	plasma membrane	43.16	44.27
KRH64195	Soybean	plasma membrane	41.5	44.18
KRH74619	Soybean	plasma membrane	41.38	44.16
KRH45700	Soybean	plasma membrane	41.02	44.01
KRH53743	Soybean	plasma membrane	41.26	43.92
KRH69531	Soybean	plasma membrane	38.88	43.83
KRH30246	Soybean	plasma membrane	38.76	42.84
KRH72710	Soybean	plasma membrane	38.64	42.82
KRG98259	Soybean	plasma membrane	31.99	41.26
KRH41260	Soybean	plasma membrane	37.93	40.33
KRH59991	Soybean	plasma membrane	37.69	40.13

Protein Annotations

EntrezGene:100814419	MapMan:24.2.3.11	EMBL:ACUP02005276	EnsemblPlantsGene:GLYMA_08G288400	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0009987
GO:GO:0015079	GO:GO:0016020	GO:GO:0016021	GO:GO:0071805	UniProt:I1KXH7	InterPro:K+_transporter
EnsemblPlants:KRH45699	ProteinID:KRH45699	ProteinID:KRH45699.1	PFAM:PF02705	PANTHER:PTHR30540	PANTHER:PTHR30540:SF4
TIGRFAMs:TIGR00794	TMHMM:TMhelix	UniParc:UPI00023386F9	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:+:40048746..40056206

Molecular Weight (calculated)

93579.4 Da

IEP (calculated)

6.217

GRAVY (calculated)

0.342

Length

841 amino acids

Sequence
(BLAST)

001: MREDRIEEIS TRLLLGRSSS GGSSESRWVD GSEVDWDEVP MWSKHDDGRE GYGSIRRRLT KKPKRVDSFD VEAMEIAGTH AHHSKDLSLW PTIALAFKTL
101: GVVYGDMGTS PLYVFADVFS KVPIGSDDDI LGALSLVMYT IALIPLAKYV FIVLKANDSG EGGTFALYSL ICRYANVSLL PNRQQADEQI SSFKLKLPTP
201: ELERALRIKD TLERTPFLKN LLLVLVLLGA SMVIGDGILT PAISVMSAIS GLQDQIDEFG TGEVVGISIV VLVALFSIQR FGTSKVGFMF APILALWFFS
301: LGAIGIYNIL KYDITVLRAF NPAYIYYFFK NNGKDAWSAL GGCVLCITGA EAMFADLGHF SVPAIQIAFT CVVFPCLLLA YMGQAAFLTK NPNSYASVFY
401: KSVPESLFWP MFVIATLAAM IASQAMISAT FSCIKQSMAL GCFPRLKIIH TSKRFIGQIY IPIINWFLMI MCIVVVSIFQ STTDIANAYG IAEVGVMMVS
501: TTLVTLVMVL IWQTNLFLAF SFALVFGTVE LIYLSSVLSK IIEGGWLPLA FATFFLSVMY TWNYGSVLKY RSEVREKVSV DSMLELGSNL GTVRVPGIGL
601: LYNELVQGIP SIFLQFLLNL PALHSTIVFV CIKYVPVPVV PQEERFLFRR VCPKDYHIFR CVARYGYKDV RKEDHHAFEQ LLIESLEKFL RREALETALE
701: LEGNLSDEMD SVSVNTRVSD VPVDTTAEEL RIPLVHDQKL EEAGASSASQ EVASALPSSY MSSDEDPALE YELSALREAL ESGFTYLLGH GDVRAKKNSF
801: FFKKLMINYF YAFLRKNCRG GTANMRVPHT NIIQVGMTYM V

Best Arabidopsis Sequence Match ( AT1G60160.1 )
(BLAST)

001: MEEIEEGSSN NSIRRVGTGS SDRRWVDGSE VDSETPLFSE IRDRDYSFGN LRRRLMKKPK RADSLDVEAM EIAGSHGHNL KDLSLLTTLG IAFQTLGVVY
101: GDMGTSPLYV FSDVFSKVPI RSEVDVLGAL SLVIYTIAVI PLAKYVFVVL KANDNGEGGT FALYSLICRY AKVNKLPNQQ PADEQISSFR LKLPTPELER
201: ALGIKEALET KGYLKTLLLL LVLMGTSMII GDGILTPAMS VMSAMSGLQG EVKGFGTNAL VMSSIVILVA LFSIQRFGTG KVGFLFAPVL ALWFFSLGAI
301: GIYNLLKYDF TVIRALNPFY IVLFFNKNSK QAWSALGGCV LCITGAEAMF ADLGHFSVRS IQMAFTCVVF PCLLLAYMGQ AAYLTKHPEA SARIFYDSVP
401: KSLFWPVFVI ATLAAMIASQ AMISATFSCV KQAMALGCFP RLKIIHTSKK RIGQIYIPVI NWFLMIMCIL VVSIFRSTTH IANAYGIAEV GVMMVSTVLV
501: TLVMLLIWQT NIFLALCFPL IFGSVETIYL LAVLTKILEG GWVPLVFATF FLTVMYIWNY GSVLKYQSEV RERISMDFMR ELGSTLGTIR IPGIGLLYNE
601: LVQGIPSIFG QFLLTLPAIH STIIFVCIKY VPVPVVPQEE RFLFRRVCPK DYHMFRCIAR YGYKDVRKED SRVFEQLLIE SLEKFLRCEA LEDALESTLN
701: DFDPDRVSVA SDTYTDDLMA PLIHRAKRSE PEQELDSEVL PSSSVGSSME EDPALEYELA ALREATDSGL TYLLAHGDVR AKKNSIFVKK LVINYFYAFL
801: RRNCRAGAAN LTVPHMNILQ AGMTYMV

Arabidopsis Description

POT12Putative potassium transporter 12 [Source:UniProtKB/Swiss-Prot;Acc:O80739]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.