Factsheet for PGSC0003DMT400078243

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400040141
PGSC0003DMT400040142
PGSC0003DMT400040143
PGSC0003DMT400040144
PGSC0003DMT400040206
PGSC0003DMT400040207
PGSC0003DMT400077934

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07140.1	PGSC0003DMT400040141	AT3G46090.1	17259181
AT5G07140.1	PGSC0003DMT400040142	AT3G46090.1	17259181
AT5G07140.1	PGSC0003DMT400040143	AT3G46090.1	17259181
AT5G07140.1	PGSC0003DMT400040144	AT3G46090.1	17259181
AT5G07140.1	PGSC0003DMT400040206	AT3G46090.1	17259181
AT5G07140.1	PGSC0003DMT400040207	AT3G46090.1	17259181
AT5G07140.1	PGSC0003DMT400077934	AT3G46090.1	17259181

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g082190.2.1	Tomato	nucleus	97.16	97.16
VIT_06s0004g07070.t01	Wine grape	cytosol	77.26	78.04
KRH30188	Soybean	cytosol	64.88	66.67
KRH17075	Soybean	cytosol	65.72	66.61
KRH72728	Soybean	cytosol	65.38	66.5
KRG98231	Soybean	cytosol	63.71	65.69
AT5G07140.1	Thale cress	cytosol	63.55	65.18
AT5G58520.1	Thale cress	cytosol	65.05	64.4
Bra006762.1-P	Field mustard	cytosol	61.54	64.34
GSMUA_Achr8P01900_001	Banana	nucleus	57.36	57.36
Os03t0295600-01	Rice	cytosol	56.02	56.59
GSMUA_Achr9P04550_001	Banana	cytosol	55.02	56.43
Zm00001d028774_P001	Maize	cytosol	55.69	56.25
TraesCS4A01G111900.1	Wheat	cytosol	55.02	55.2
KXG39573	Sorghum	cytosol	55.69	55.04
HORVU4Hr1G055860.2	Barley	cytosol	54.85	55.03
TraesCS4B01G192000.1	Wheat	cytosol	54.85	55.03
TraesCS4D01G193200.1	Wheat	cytosol	54.85	55.03
Zm00001d047719_P001	Maize	cytosol	54.35	54.71
KRH48773	Soybean	cytosol, extracellular, nucleus, plastid	13.21	51.63
CDX99003	Canola	cytosol, nucleus, plasma membrane	61.71	32.45
CDX70011	Canola	cytosol, nucleus, plasma membrane	61.71	32.34

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102595334	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1CZQ2	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400030450	PGSC:PGSC0003DMG400030450
EnsemblPlants:PGSC0003DMT400078243	PIRSF:PIRSF000615	PFscan:PS50011	PANTHER:PTHR45097	InterPro:Prot_kinase_dom	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI000296B333	RefSeq:XP_006350856.1	SEG:seg	:	:

Description

Protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400030450]

Coordinates

chr6:-:57379912..57384899

Molecular Weight (calculated)

66089.2 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.301

Length

598 amino acids

Sequence
(BLAST)

001: MAAALECWSS RASMDEDMVE QILMSNNDRS EEPPANGCSA GGASSTGAGS NGSFKESSAM QKRLQRLSRN VSEAIASLKN SLNLESVRDP PSDRVETCRK
101: HVWGSVVRGL TQLYPGSQLP EKLVSNIRKH YDSFPLSYGQ AGFEMKDVFL HIRLIEQASA EDHPAIMIQE VSDDEVQGSI FKLTFACNSS ISWPAMSGAL
201: DSASICCKKI QIFEKKGFTL GVVMLLVQSG KEKMFKARIE NVLKSSLKKP KSTSMKKLPF GLCGTQEENT KNREYGDIEE DSGQPTYKNG FENSSPKVQL
301: QMPLPTSLFT ASVDEWQTVL SGGEEIGKWL LSSDNLEFID QIGPSTFKGV YKGKKVTIEK LRGCDKGIAY EFVLRKDLLE LMTCGHKSIL QFFGVCINEN
401: HGLCVLTKLM EGGSVYDLLL KKKKVQTKEI MRIATDVAEG IKFMNDHGVA YRDLNTQRIH LDKNGNACLG DMGILAACRS IDEAMEYETD GYRWLAPEII
501: AGDPESVKET WMSNVYSFGM IIWELVAGEV AYSAYSPVQA AVGIAACGLR PEIPKDCPQV LRSLMIKCWD NCPSNRPQFT EIVSTLVRSS SNSNSKSR

Best Arabidopsis Sequence Match ( AT5G58520.1 )
(BLAST)

001: MAAALECWSS RAGDGGDPDN DLVDQVLMRT HDRSESVITS LPETSLEVEG STTVFDQSSS AMQKRFQRLS RNVSEAIVSL KNTLNLDSAR DNQSFGGAMT
101: PKAEVSGGGG GRKLVWATVV KNLAKMYPGS QLPEKLVSNL KKHYDSLPFS YSQADFDMKE VFLHVKLIEQ AAGDDNPVFM IQEVSTEEPR GSVLRLTFAC
201: NSFLSWSTMS GVLDSASICC KKIQIFEKKG LTLGVVLLLD QSGQHSLFKT RVENTLKVAT KKPKPTSVKL PFGLCGCQEQ NGGVGELGGV EEESIQHSSR
301: LGIENLNSTI QIQVPLPSSS FAVSVDEWQT IQSGGNEIGK WLLNSDSFEF GDQIGPTSLK GIFRGKRVGI EKLKGCDKGN SYEFELRKDY LELMACGHKS
401: ILQFYGVCID ENHGLCVVTK LMEGGSLHEL MLKNKKLQTK QILRIAIDIA EGLKFVNDHG VAYRDLNTQR ILLDKHGNAC LGNIGIVTAC KSFGEAVEYE
501: TDGYRWLAPE IIAGDPENTT ETWMSNAYSF GMVLWEMVTG EAAYASCSPV QAAVGIAACG LRPEIPKECP QVLRTLMINC WNNSPSKRPN FSHIHNTLLR
601: AVSR

Arabidopsis Description

Protein kinase like protein [Source:UniProtKB/TrEMBL;Acc:Q0WN89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.