CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, nucleus, plastid

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH10294
KRH23029
KRH24840
KRH29844

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07140.1	KRH10294	AT3G46090.1	17259181
AT5G07140.1	KRH23029	AT3G46090.1	17259181
AT5G07140.1	KRH24840	AT3G46090.1	17259181
AT5G07140.1	KRH29844	AT3G46090.1	17259181

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17075	Soybean	cytosol	82.35	21.36
KRH72728	Soybean	cytosol	77.78	20.24
KRG98231	Soybean	cytosol	65.36	17.24
KRH30188	Soybean	cytosol	64.71	17.01
AT5G58520.1	Thale cress	cytosol	56.86	14.4
VIT_06s0004g07070.t01	Wine grape	cytosol	55.56	14.36
Bra006762.1-P	Field mustard	cytosol	53.59	14.34
AT5G07140.1	Thale cress	cytosol	51.63	13.55
Solyc06g082190.2.1	Tomato	nucleus	52.29	13.38
PGSC0003DMT400078243	Potato	cytosol	51.63	13.21
GSMUA_Achr8P01900_001	Banana	nucleus	49.67	12.71
GSMUA_Achr9P04550_001	Banana	cytosol	47.71	12.52
Zm00001d028774_P001	Maize	cytosol	45.75	11.82
TraesCS4B01G192000.1	Wheat	cytosol	45.75	11.74
TraesCS4A01G111900.1	Wheat	cytosol	45.75	11.74
KXG39573	Sorghum	cytosol	46.41	11.74
Os03t0295600-01	Rice	cytosol	45.1	11.66
Zm00001d047719_P001	Maize	cytosol	45.1	11.62
TraesCS4D01G193200.1	Wheat	cytosol	45.1	11.58
HORVU4Hr1G055860.2	Barley	cytosol	43.79	11.24
CDX70011	Canola	cytosol, nucleus, plasma membrane	49.67	6.66
CDX99003	Canola	cytosol, nucleus, plasma membrane	49.02	6.6

Protein Annotations

EMBL:ACUP02004281	EnsemblPlants:KRH48773	EnsemblPlantsGene:GLYMA_07G111700	EntrezGene:100814400	PANTHER:PTHR45097	ProteinID:KRH48773
ProteinID:KRH48773.1	SEG:seg	UniParc:UPI000296068E	UniProt:K7L1A2	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr7:+:11531885..11532346

Molecular Weight (calculated)

16929.6 Da

IEP (calculated)

5.307

GRAVY (calculated)

-0.188

Length

153 amino acids

Sequence
(BLAST)

001: MFGALDSSSI CCKRMQIFEK KGFTLGVVLL VVQSGHDKLV RIRVESTLMF ATKRPKTGAM KLPFGLCGCQ EENSKGGELV EIEEETSDGY RGKEFQDSGQ
101: RIQLQVPLPS SSFVVLVDEW QTIKSGGDEI EKLLLNLRSL INQEQSMPIG SCP

Best Arabidopsis Sequence Match ( AT5G58520.1 )
(BLAST)

001: MAAALECWSS RAGDGGDPDN DLVDQVLMRT HDRSESVITS LPETSLEVEG STTVFDQSSS AMQKRFQRLS RNVSEAIVSL KNTLNLDSAR DNQSFGGAMT
101: PKAEVSGGGG GRKLVWATVV KNLAKMYPGS QLPEKLVSNL KKHYDSLPFS YSQADFDMKE VFLHVKLIEQ AAGDDNPVFM IQEVSTEEPR GSVLRLTFAC
201: NSFLSWSTMS GVLDSASICC KKIQIFEKKG LTLGVVLLLD QSGQHSLFKT RVENTLKVAT KKPKPTSVKL PFGLCGCQEQ NGGVGELGGV EEESIQHSSR
301: LGIENLNSTI QIQVPLPSSS FAVSVDEWQT IQSGGNEIGK WLLNSDSFEF GDQIGPTSLK GIFRGKRVGI EKLKGCDKGN SYEFELRKDY LELMACGHKS
401: ILQFYGVCID ENHGLCVVTK LMEGGSLHEL MLKNKKLQTK QILRIAIDIA EGLKFVNDHG VAYRDLNTQR ILLDKHGNAC LGNIGIVTAC KSFGEAVEYE
501: TDGYRWLAPE IIAGDPENTT ETWMSNAYSF GMVLWEMVTG EAAYASCSPV QAAVGIAACG LRPEIPKECP QVLRTLMINC WNNSPSKRPN FSHIHNTLLR
601: AVSR

Arabidopsis Description

Protein kinase like protein [Source:UniProtKB/TrEMBL;Acc:Q0WN89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.