CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH10294
KRH23029
KRH24840
KRH29844

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07140.1	KRH10294	AT3G46090.1	17259181
AT5G07140.1	KRH23029	AT3G46090.1	17259181
AT5G07140.1	KRH24840	AT3G46090.1	17259181
AT5G07140.1	KRH29844	AT3G46090.1	17259181

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17075	Soybean	cytosol	94.05	93.73
KRG98231	Soybean	cytosol	77.21	78.28
KRH48773	Soybean	cytosol, extracellular, nucleus, plastid	20.24	77.78
KRH30188	Soybean	cytosol	76.19	76.98
VIT_06s0004g07070.t01	Wine grape	cytosol	75.0	74.49
AT5G58520.1	Thale cress	cytosol	67.52	65.73
Solyc06g082190.2.1	Tomato	nucleus	66.67	65.55
PGSC0003DMT400078243	Potato	cytosol	66.5	65.38
Bra006762.1-P	Field mustard	cytosol	63.44	65.21
AT5G07140.1	Thale cress	cytosol	62.41	62.95
GSMUA_Achr8P01900_001	Banana	nucleus	58.16	57.19
Zm00001d028774_P001	Maize	cytosol	56.63	56.25
GSMUA_Achr9P04550_001	Banana	cytosol	55.44	55.92
Zm00001d047719_P001	Maize	cytosol	56.29	55.72
Os03t0295600-01	Rice	cytosol	55.78	55.41
KXG39573	Sorghum	cytosol	56.97	55.37
TraesCS4A01G111900.1	Wheat	cytosol	55.1	54.36
TraesCS4D01G193200.1	Wheat	cytosol	54.93	54.19
TraesCS4B01G192000.1	Wheat	cytosol	54.76	54.03
HORVU4Hr1G055860.2	Barley	cytosol	54.59	53.86
CDX70011	Canola	cytosol, nucleus, plasma membrane	61.9	31.9
CDX99003	Canola	cytosol, nucleus, plasma membrane	60.71	31.4

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100801110	Gene3D:3.30.200.20	MapMan:50.2.7	EMBL:ACUP02001237	EnsemblPlantsGene:GLYMA_02G229900
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	UniProt:I1JHG3	InterPro:IPR000719
EnsemblPlants:KRH72728	ProteinID:KRH72728	ProteinID:KRH72728.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615
PRINTS:PR00109	PFscan:PS50011	PANTHER:PTHR45097	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
UniParc:UPI0002337868	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:41743114..41748263

Molecular Weight (calculated)

65175.0 Da

IEP (calculated)

6.559

GRAVY (calculated)

-0.328

Length

588 amino acids

Sequence
(BLAST)

001: MAAALECWSS RTTTSAAAAT DDDTVEQVLM RTHHRSEGTT TTSTHNNKDN LPSAIPVHKK LQKLTRNVSE AIASFRNSLN LDSPPSSNAD ASSRKLAWGS
101: VVRNLTQLYP GSQLPEKLMS NIRKHYDSLP LSYAQAEFDM KNVFLHIKLM EQASESDQPA ILIQEECDGE IQGSALRLTF ACNSPISWPA MSGALDSSSI
201: CCKRMQIFEK KGFTLGVVLL VVLPGHDKLV RTRVENALKF AMKKPKTGAV KLPFGLCGCQ EENSKGRELV EIEEETGDGY RGKEFENSSQ RIQLQVPLPS
301: SSFVVSVDEW QTIKSGGNEI EKWLLNSDSV EFVEQIGPNS YRGVYMGKRV GIEKLKGCDK GNSYEFELHK DLLELMTCGH RNILQFCGIC VDDNHGLCVV
401: TKFMEGGSVH DLMMKNKKLQ TKDVVRIAVD VAEGIKFMND HGVAYRDLNT RGILLDKHGN ACLGDMGIVT ACKSVGEAME YETDGYRWLA PEIIAGDPEN
501: VTETWMSNVY SFGMVIWEMV TGEAAYSSFS PVQAAVGIAA CGLRPEIPKD CQQTLKHIMT KCWNNTPSKR PHFSEILAIL LRPNNNNR

Best Arabidopsis Sequence Match ( AT5G58520.1 )
(BLAST)

001: MAAALECWSS RAGDGGDPDN DLVDQVLMRT HDRSESVITS LPETSLEVEG STTVFDQSSS AMQKRFQRLS RNVSEAIVSL KNTLNLDSAR DNQSFGGAMT
101: PKAEVSGGGG GRKLVWATVV KNLAKMYPGS QLPEKLVSNL KKHYDSLPFS YSQADFDMKE VFLHVKLIEQ AAGDDNPVFM IQEVSTEEPR GSVLRLTFAC
201: NSFLSWSTMS GVLDSASICC KKIQIFEKKG LTLGVVLLLD QSGQHSLFKT RVENTLKVAT KKPKPTSVKL PFGLCGCQEQ NGGVGELGGV EEESIQHSSR
301: LGIENLNSTI QIQVPLPSSS FAVSVDEWQT IQSGGNEIGK WLLNSDSFEF GDQIGPTSLK GIFRGKRVGI EKLKGCDKGN SYEFELRKDY LELMACGHKS
401: ILQFYGVCID ENHGLCVVTK LMEGGSLHEL MLKNKKLQTK QILRIAIDIA EGLKFVNDHG VAYRDLNTQR ILLDKHGNAC LGNIGIVTAC KSFGEAVEYE
501: TDGYRWLAPE IIAGDPENTT ETWMSNAYSF GMVLWEMVTG EAAYASCSPV QAAVGIAACG LRPEIPKECP QVLRTLMINC WNNSPSKRPN FSHIHNTLLR
601: AVSR

Arabidopsis Description

Protein kinase like protein [Source:UniProtKB/TrEMBL;Acc:Q0WN89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.