Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400090011 | Potato | nucleus | 46.5 | 47.1 |
PGSC0003DMT400060523 | Potato | mitochondrion | 40.13 | 45.65 |
PGSC0003DMT400040144 | Potato | nucleus | 46.5 | 44.24 |
PGSC0003DMT400040142 | Potato | nucleus | 46.5 | 44.24 |
PGSC0003DMT400040143 | Potato | nucleus | 46.5 | 43.98 |
Bra035678.1-P | Field mustard | nucleus | 39.49 | 41.89 |
CDX77198 | Canola | nucleus | 39.49 | 41.89 |
CDY31725 | Canola | nucleus | 39.49 | 41.89 |
PGSC0003DMT400077934 | Potato | cytosol, nucleus, plastid | 43.31 | 41.46 |
CDY15775 | Canola | nucleus | 39.49 | 41.33 |
PGSC0003DMT400040141 | Potato | nucleus | 44.59 | 41.18 |
PGSC0003DMT400040206 | Potato | nucleus | 44.59 | 40.94 |
PGSC0003DMT400040207 | Potato | nucleus | 42.68 | 40.85 |
Bra011931.1-P | Field mustard | cytosol | 38.85 | 40.67 |
CDY04582 | Canola | nucleus | 38.85 | 40.67 |
AT2G28710.1 | Thale cress | nucleus | 40.13 | 40.38 |
PGSC0003DMT400021456 | Potato | nucleus | 47.77 | 39.06 |
GSMUA_Achr8P02630_001 | Banana | nucleus | 20.38 | 32.0 |
GSMUA_Achr6P34280_001 | Banana | cytosol, mitochondrion, nucleus | 21.66 | 30.91 |
PGSC0003DMT400060463 | Potato | nucleus | 40.13 | 30.29 |
PGSC0003DMT400001104 | Potato | nucleus | 38.85 | 20.96 |
PGSC0003DMT400009871 | Potato | nucleus | 39.49 | 20.81 |
PGSC0003DMT400018457 | Potato | nucleus | 40.76 | 19.45 |
PGSC0003DMT400079773 | Potato | nucleus | 38.85 | 16.58 |
Protein Annotations
EnsemblPlants:PGSC0003DMT400077933 | EnsemblPlantsGene:PGSC0003DMG400030311 | EntrezGene:102583091 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF198 |
PFAM:PF13912 | PFscan:PS50157 | PGSC:PGSC0003DMG400030311 | RefSeq:XP_006350904.1 | ScanProsite:PS00028 | SEG:seg |
SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI00029630F3 | UniProt:M1CZ26 | MapMan:15.5.15 | : |
Description
ZPT2-8 [Source:PGSC_GENE;Acc:PGSC0003DMG400030311]
Coordinates
chr6:+:56379375..56379923
Molecular Weight (calculated)
18013.9 Da
IEP (calculated)
9.704
GRAVY (calculated)
-0.643
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIKRRREEE IVTVETLAMA NCVNILEKNS SLSRRFFECK TCKKQFESFQ ALGGHRASHK KPKLVLPSDS IKSKTKKHEC SYCGEEFVLG QALGGHMRKH
101: RDKLMEKPKE KNTYKSAEKM ETESGKKFCL DLNLTPYEND QLTLGIIPAF TVVHSLF
101: RDKLMEKPKE KNTYKSAEKM ETESGKKFCL DLNLTPYEND QLTLGIIPAF TVVHSLF
001: MERGRSDMEM INNMANCLIL LSKAHQNDTK SRVFACKTCN KEFPSFQALG GHRASHRRSA ALEGHAPPSP KRVKPVKHEC PICGAEFAVG QALGGHMRKH
101: RGGSGGGGGR SLAPATAPVT MKKSGGGNGK RVLCLDLNLT PLENEDLKLE LGRFIF
101: RGGSGGGGGR SLAPATAPVT MKKSGGGNGK RVLCLDLNLT PLENEDLKLE LGRFIF
Arabidopsis Description
At2g28710 [Source:UniProtKB/TrEMBL;Acc:Q9SI97]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.