Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g055500.1.1 | Tomato | nucleus | 49.73 | 50.55 |
| HORVU5Hr1G095320.1 | Barley | nucleus | 8.97 | 47.83 |
| HORVU3Hr1G057300.1 | Barley | nucleus | 8.97 | 47.83 |
| HORVU1Hr1G012760.1 | Barley | nucleus | 8.7 | 46.38 |
| HORVU4Hr1G082500.1 | Barley | nucleus | 8.7 | 46.38 |
| PGSC0003DMT400060523 | Potato | mitochondrion | 17.12 | 45.65 |
| PGSC0003DMT400040143 | Potato | nucleus | 18.75 | 41.57 |
| HORVU1Hr1G020710.1 | Barley | nucleus | 8.7 | 41.56 |
| PGSC0003DMT400040144 | Potato | nucleus | 18.48 | 41.21 |
| HORVU2Hr1G122100.1 | Barley | nucleus, plastid | 8.42 | 40.26 |
| HORVU5Hr1G095330.1 | Barley | nucleus | 8.42 | 40.26 |
| HORVU5Hr1G095390.1 | Barley | nucleus | 8.42 | 40.26 |
| PGSC0003DMT400040141 | Potato | nucleus | 18.48 | 40.0 |
| PGSC0003DMT400040142 | Potato | nucleus | 17.93 | 40.0 |
| PGSC0003DMT400040206 | Potato | nucleus | 18.48 | 39.77 |
| PGSC0003DMT400077934 | Potato | cytosol, nucleus, plastid | 17.39 | 39.02 |
| PGSC0003DMT400077933 | Potato | nucleus | 16.58 | 38.85 |
| PGSC0003DMT400040207 | Potato | nucleus | 17.12 | 38.41 |
| PGSC0003DMT400001104 | Potato | nucleus | 30.16 | 38.14 |
| VIT_13s0019g05170.t01 | Wine grape | nucleus | 31.25 | 38.08 |
| Zm00001d036330_P001 | Maize | nucleus | 23.91 | 35.77 |
| PGSC0003DMT400009871 | Potato | nucleus | 28.26 | 34.9 |
| PGSC0003DMT400018457 | Potato | nucleus | 29.35 | 32.83 |
| PGSC0003DMT400090011 | Potato | nucleus | 13.32 | 31.61 |
| Zm00001d051865_P001 | Maize | nucleus | 27.72 | 30.91 |
| KXG20985 | Sorghum | nucleus, plastid | 22.55 | 30.18 |
| PGSC0003DMT400060463 | Potato | nucleus | 16.58 | 29.33 |
| Os02t0823900-00 | Rice | cytosol, nucleus, peroxisome | 26.63 | 28.49 |
| Os04t0162500-01 | Rice | vacuole | 21.74 | 27.68 |
| Zm00001d004439_P001 | Maize | nucleus | 26.36 | 27.02 |
| TraesCS2A01G002400.1 | Wheat | nucleus | 25.0 | 26.9 |
| HORVU6Hr1G092750.1 | Barley | nucleus | 26.36 | 26.87 |
| Zm00001d024866_P001 | Maize | nucleus | 26.63 | 26.78 |
| TraesCS6A01G404600.1 | Wheat | nucleus | 26.63 | 26.7 |
| TraesCS6D01G387900.1 | Wheat | nucleus | 26.36 | 26.5 |
| TraesCS6B01G448900.1 | Wheat | nucleus | 26.09 | 26.3 |
| EES07783 | Sorghum | nucleus | 27.17 | 25.58 |
| TraesCS2B01G020300.1 | Wheat | nucleus | 25.0 | 25.21 |
| PGSC0003DMT400021456 | Potato | nucleus | 13.04 | 25.0 |
| EES10410 | Sorghum | nucleus | 26.63 | 24.44 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400079773 | EnsemblPlantsGene:PGSC0003DMG402031064 | EntrezGene:102581594 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF308 |
| PFAM:PF13912 | PFscan:PS50157 | PGSC:PGSC0003DMG402031064 | RefSeq:XP_006361708.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000294B22E | UniProt:M1D2E8 | MapMan:15.5.15 | : |
Description
PEThy;ZPT2-6 [Source:PGSC_GENE;Acc:PGSC0003DMG402031064]
Coordinates
chr11:-:3959379..3960987
Molecular Weight (calculated)
41620.6 Da
IEP (calculated)
6.558
GRAVY (calculated)
-0.984
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MEALEEVVVC PSKDLFHIVK GKRTKRLRLQ SPNIPFSLTT SHDSLNACDI AIENSSNNNN NNIINNIDND NRDDVACNDE GIACNDNNIS NNNNNNNNNE
101: ALSSAASSEV FINTFTEEEE ETAKCLVLLS KGRNDHPPPR RLINNNNVDF FNEDLRLYPT KFNSKRYIET STNSIDGTKA GIYVYECKTC NRTFSSFQAL
201: GGHRASHKKP KTLNTEFNKK SYFDFSDEDD YHLQHSPSTL YNKNKNTNNI NKNLPNSSNN KYSSSSPRIH ECSYCGAEFT SGQALGGHMR RHRGGANVNS
301: PYHLSNLSPA TSIDQEFGNN NNIMKKQRDH ELSLDLNNLP VHQDDHPVVS LKQQDQEQTQ RQLVDCHY
101: ALSSAASSEV FINTFTEEEE ETAKCLVLLS KGRNDHPPPR RLINNNNVDF FNEDLRLYPT KFNSKRYIET STNSIDGTKA GIYVYECKTC NRTFSSFQAL
201: GGHRASHKKP KTLNTEFNKK SYFDFSDEDD YHLQHSPSTL YNKNKNTNNI NKNLPNSSNN KYSSSSPRIH ECSYCGAEFT SGQALGGHMR RHRGGANVNS
301: PYHLSNLSPA TSIDQEFGNN NNIMKKQRDH ELSLDLNNLP VHQDDHPVVS LKQQDQEQTQ RQLVDCHY
001: MEAFEEATKE QSLILKGKRT KRQRPQSPIP FSISPPIVST PENNMEEEYT DLDSKDNALG NDEGNHKKDG VITSSSSSAS WSSQNNHTLK AAEDEEDQDI
101: ANCLILLAQG HSLPHNNHHL PNSNNNNTYR FTSRRFLETS SSNSGGKAGY YVYQCKTCDR TFPSFQALGG HRASHKKPKA ASFYSNLDLK KNTYANDAVS
201: LVHTTTTVFK NNNSRSLVVY GKASKNKVHE CGICGAEFTS GQALGGHMRR HRGAVVVPAV IAPTVTVATA AANTELSLSS MSFDQISDGH QDHLAMPAKK
301: KARTVVSLDL DLNLPAPEDE NRVNGFSFAS KQNHEQEHQQ KKQREEPKSL VLSAPTLVDC HY
101: ANCLILLAQG HSLPHNNHHL PNSNNNNTYR FTSRRFLETS SSNSGGKAGY YVYQCKTCDR TFPSFQALGG HRASHKKPKA ASFYSNLDLK KNTYANDAVS
201: LVHTTTTVFK NNNSRSLVVY GKASKNKVHE CGICGAEFTS GQALGGHMRR HRGAVVVPAV IAPTVTVATA AANTELSLSS MSFDQISDGH QDHLAMPAKK
301: KARTVVSLDL DLNLPAPEDE NRVNGFSFAS KQNHEQEHQQ KKQREEPKSL VLSAPTLVDC HY
Arabidopsis Description
C2H2-type zinc finger family protein [Source:UniProtKB/TrEMBL;Acc:Q84K31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.