Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400075091 | Potato | nucleus | 54.59 | 40.61 |
| PGSC0003DMT400070939 | Potato | nucleus | 32.57 | 31.84 |
| KRH21928 | Soybean | nucleus | 37.16 | 30.0 |
| KRH21925 | Soybean | nucleus | 38.53 | 28.57 |
| KRH21926 | Soybean | nucleus | 38.53 | 28.38 |
| KRH21927 | Soybean | nucleus | 38.07 | 27.67 |
| PGSC0003DMT400053122 | Potato | nucleus | 32.11 | 25.27 |
| TraesCS7B01G249700.1 | Wheat | nucleus | 27.52 | 21.9 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 28.44 | 20.81 |
| TraesCS4B01G170100.1 | Wheat | nucleus | 28.44 | 20.53 |
| HORVU4Hr1G050320.2 | Barley | nucleus | 27.98 | 20.47 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 27.98 | 20.4 |
| HORVU0Hr1G030830.1 | Barley | nucleus, plastid | 26.15 | 20.36 |
| CDX72140 | Canola | nucleus | 25.69 | 20.29 |
| CDY27218 | Canola | nucleus | 25.23 | 19.93 |
| Bra007243.1-P | Field mustard | nucleus | 25.23 | 19.93 |
| CDX67645 | Canola | nucleus | 25.69 | 19.79 |
| AT3G56400.1 | Thale cress | nucleus | 26.61 | 19.73 |
| PGSC0003DMT400084227 | Potato | nucleus | 26.61 | 19.73 |
| TraesCS4A01G135000.1 | Wheat | nucleus | 22.94 | 19.68 |
| HORVU7Hr1G083270.2 | Barley | nucleus | 27.52 | 19.48 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 26.15 | 19.45 |
| Bra003239.1-P | Field mustard | nucleus | 25.23 | 19.43 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 29.82 | 19.4 |
| TraesCS2A01G489500.1 | Wheat | nucleus | 26.15 | 19.39 |
| PGSC0003DMT400051194 | Potato | nucleus | 25.69 | 19.31 |
| Bra014692.1-P | Field mustard | nucleus | 25.23 | 19.3 |
| CDX75992 | Canola | nucleus | 25.23 | 19.3 |
| CDY32013 | Canola | nucleus | 24.77 | 19.08 |
| PGSC0003DMT400046351 | Potato | nucleus | 26.15 | 18.94 |
| CDY66845 | Canola | nucleus | 24.77 | 18.82 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 26.61 | 18.77 |
| Os05t0322900-01 | Rice | nucleus | 27.98 | 18.71 |
| EES15768 | Sorghum | nucleus | 28.44 | 18.56 |
| TraesCS2B01G517400.1 | Wheat | nucleus | 25.23 | 18.52 |
| EES01669 | Sorghum | nucleus | 23.39 | 18.41 |
| HORVU1Hr1G069620.7 | Barley | nucleus | 25.23 | 18.33 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 28.9 | 18.21 |
| TraesCS1A01G301100.1 | Wheat | plastid | 25.23 | 18.15 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 25.23 | 18.15 |
| TraesCS2A01G104900.1 | Wheat | nucleus | 27.98 | 18.1 |
| TraesCS2A01G043600.1 | Wheat | nucleus | 22.94 | 18.05 |
| Os07t0680400-01 | Rice | nucleus | 27.52 | 18.02 |
| TraesCS3B01G375700.1 | Wheat | nucleus | 22.48 | 18.01 |
| PGSC0003DMT400031695 | Potato | nucleus | 27.98 | 17.99 |
| TraesCS3A01G343900.1 | Wheat | nucleus | 22.48 | 17.95 |
| TraesCS1D01G300500.1 | Wheat | plastid | 25.23 | 17.92 |
| CDY14738 | Canola | nucleus | 27.06 | 17.88 |
| Os01t0821600-01 | Rice | nucleus | 22.94 | 17.86 |
| TraesCS2D01G104600.1 | Wheat | nucleus | 27.52 | 17.86 |
| TraesCS3B01G375800.1 | Wheat | nucleus | 22.02 | 17.84 |
| Zm00001d022437_P001 | Maize | mitochondrion, nucleus | 27.52 | 17.75 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 22.02 | 17.71 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 28.44 | 17.66 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 22.02 | 17.65 |
| CDY22474 | Canola | nucleus | 27.52 | 17.65 |
| HORVU2Hr1G109330.1 | Barley | mitochondrion, nucleus, vacuole | 26.15 | 17.54 |
| PGSC0003DMT400084214 | Potato | nucleus | 26.61 | 17.52 |
| PGSC0003DMT400014949 | Potato | nucleus | 28.9 | 17.5 |
| Os05t0478800-00 | Rice | nucleus | 17.89 | 17.49 |
| Zm00001d043060_P001 | Maize | nucleus | 22.94 | 17.48 |
| TraesCS7A01G338500.1 | Wheat | nucleus, plastid | 29.36 | 17.44 |
| TraesCS2B01G056300.1 | Wheat | nucleus | 22.48 | 17.44 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 21.56 | 17.41 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 23.39 | 17.41 |
| Bra000203.1-P | Field mustard | nucleus | 27.06 | 17.35 |
| CDY35441 | Canola | nucleus | 27.06 | 17.35 |
| AT2G40750.1 | Thale cress | nucleus | 27.52 | 17.34 |
| Bra016974.1-P | Field mustard | nucleus | 26.15 | 17.27 |
| HORVU2Hr1G017740.3 | Barley | nucleus | 27.52 | 17.24 |
| CDX79972 | Canola | nucleus | 26.61 | 17.21 |
| HORVU3Hr1G080980.1 | Barley | nucleus | 19.27 | 17.14 |
| HORVU2Hr1G006600.1 | Barley | nucleus | 25.23 | 17.13 |
| Bra004586.1-P | Field mustard | nucleus | 26.61 | 17.11 |
| CDY23883 | Canola | nucleus | 26.61 | 17.11 |
| EER94905 | Sorghum | nucleus | 25.69 | 17.07 |
| Zm00001d012505_P001 | Maize | nucleus | 20.64 | 17.05 |
| CDY06967 | Canola | nucleus | 25.69 | 16.97 |
| Zm00001d047523_P001 | Maize | nucleus | 25.23 | 16.92 |
| PGSC0003DMT400000599 | Potato | nucleus | 26.61 | 16.76 |
| Zm00001d010617_P001 | Maize | nucleus | 24.31 | 16.72 |
| TraesCS2B01G056400.1 | Wheat | nucleus, plastid | 22.02 | 16.67 |
| TraesCS1D01G300300.1 | Wheat | nucleus | 23.39 | 16.61 |
| PGSC0003DMT400023502 | Potato | nucleus | 27.06 | 16.57 |
| Zm00001d023616_P001 | Maize | plastid | 28.9 | 16.54 |
| Zm00001d023615_P001 | Maize | plastid | 28.9 | 16.54 |
| TraesCS2B01G121800.1 | Wheat | nucleus | 26.15 | 16.43 |
| TraesCS2A01G043800.1 | Wheat | nucleus | 22.02 | 16.22 |
| Os05t0478400-00 | Rice | nucleus | 26.61 | 16.2 |
| TraesCS2B01G121900.1 | Wheat | nucleus | 27.98 | 16.05 |
| HORVU7Hr1G075960.1 | Barley | nucleus, plastid | 21.56 | 16.04 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 25.69 | 16.0 |
| EER99917 | Sorghum | mitochondrion, nucleus | 25.69 | 15.82 |
| TraesCS2A01G043700.1 | Wheat | nucleus | 19.72 | 15.81 |
| Os03t0335200-01 | Rice | nucleus | 22.02 | 15.24 |
| HORVU3Hr1G081030.3 | Barley | nucleus | 22.02 | 15.0 |
| HORVU2Hr1G017720.1 | Barley | nucleus, plastid | 25.23 | 14.95 |
| PGSC0003DMT400022638 | Potato | nucleus | 20.18 | 12.68 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:M1AFF6 | PFAM:PF03106 | EnsemblPlantsGene:PGSC0003DMG400008391 |
| PGSC:PGSC0003DMG400008391 | EnsemblPlants:PGSC0003DMT400021625 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF37 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000294D984 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
DNA-binding protein 4 [Source:PGSC_GENE;Acc:PGSC0003DMG400008391]
Coordinates
chr10:-:53176675..53181319
Molecular Weight (calculated)
25432.1 Da
IEP (calculated)
8.880
GRAVY (calculated)
-0.788
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSSLLKNKT SDLEKIIVEL NRGREFTCRL REILKKHVDH VDDEDAYMLV GKIMSSFCAT LSILSSNEDS SSSSCKISSL KDQRGRYKRR RTLETSIKET
101: STLVYDGHAW RKYGQKKILN DKYPRNYFRC THKFDQGCQA NKQVQRIQEN PPLFRITYYG HHTCKTCPKV SQMICDSPND HEDSNSVLLN FNSTNNNYNN
201: HHHFLGMMVE TVDLSFEF
101: STLVYDGHAW RKYGQKKILN DKYPRNYFRC THKFDQGCQA NKQVQRIQEN PPLFRITYYG HHTCKTCPKV SQMICDSPND HEDSNSVLLN FNSTNNNYNN
201: HHHFLGMMVE TVDLSFEF
001: MDTNKAKKLK VMNQLVEGHD LTTQLQQLLS QPGSGLEDLV AKILVCFNNT ISVLDTFEPI SSSSSLAAVE GSQNASCDND GKFEDSGDSR KRLGPVKGKR
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
Arabidopsis Description
WRKY70Probable WRKY transcription factor 70 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY00]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.