Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G104600.1 | Wheat | nucleus | 88.73 | 91.37 |
| TraesCS2A01G104900.1 | Wheat | nucleus | 88.15 | 90.5 |
| HORVU2Hr1G017740.3 | Barley | nucleus | 86.99 | 86.49 |
| TraesCS2B01G121900.1 | Wheat | nucleus | 87.28 | 79.47 |
| TraesCS2D01G104500.1 | Wheat | nucleus | 71.68 | 70.66 |
| Zm00001d022437_P001 | Maize | mitochondrion, nucleus | 51.16 | 52.37 |
| Os07t0680400-01 | Rice | nucleus | 49.71 | 51.65 |
| EER99917 | Sorghum | mitochondrion, nucleus | 52.02 | 50.85 |
| TraesCS4D01G172200.1 | Wheat | nucleus | 36.13 | 41.81 |
| PGSC0003DMT400021625 | Potato | nucleus | 18.21 | 28.9 |
| TraesCS7D01G345700.1 | Wheat | nucleus | 24.57 | 28.52 |
| TraesCS2D01G489700.1 | Wheat | nucleus | 22.54 | 26.62 |
| TraesCS4D01G119700.1 | Wheat | nucleus | 15.61 | 24.32 |
| PGSC0003DMT400070939 | Potato | nucleus | 15.61 | 24.22 |
| TraesCS1D01G300500.1 | Wheat | plastid | 21.39 | 24.1 |
| TraesCS1D01G300700.1 | Wheat | nucleus | 21.1 | 24.09 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 17.05 | 23.14 |
| KRH09521 | Soybean | nucleus | 17.63 | 23.02 |
| TraesCS4D01G178400.1 | Wheat | nucleus | 13.58 | 22.82 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 16.18 | 22.76 |
| KRH53716 | Soybean | nucleus | 20.81 | 22.57 |
| TraesCS1D01G300300.1 | Wheat | nucleus | 19.94 | 22.48 |
| KRH64216 | Soybean | nucleus | 20.52 | 22.4 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 18.79 | 22.18 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 21.39 | 22.09 |
| KRH16921 | Soybean | nucleus | 15.32 | 22.08 |
| TraesCS3D01G337500.1 | Wheat | nucleus | 17.05 | 21.85 |
| PGSC0003DMT400075091 | Potato | nucleus | 18.5 | 21.84 |
| TraesCS3D01G337600.1 | Wheat | nucleus | 17.05 | 21.77 |
| Solyc09g015770.2.1 | Tomato | extracellular, nucleus | 18.21 | 21.65 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 15.03 | 21.49 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 15.32 | 21.46 |
| VIT_13s0067g03140.t01 | Wine grape | nucleus | 19.36 | 21.41 |
| KRH00435 | Soybean | nucleus | 18.5 | 21.4 |
| KRH21928 | Soybean | nucleus | 16.47 | 21.11 |
| KRH21926 | Soybean | nucleus | 17.63 | 20.61 |
| Solyc03g095770.2.1 | Tomato | nucleus | 16.18 | 20.51 |
| KRH21925 | Soybean | nucleus | 17.34 | 20.41 |
| KRH40720 | Soybean | nucleus | 17.63 | 20.33 |
| TraesCS3D01G337100.1 | Wheat | nucleus | 15.61 | 20.22 |
| KRH16920 | Soybean | nucleus | 17.63 | 20.13 |
| KRH64882 | Soybean | nucleus | 13.58 | 20.0 |
| KRH21927 | Soybean | nucleus | 17.34 | 20.0 |
| PGSC0003DMT400053122 | Potato | nucleus | 15.9 | 19.86 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 19.94 | 19.66 |
| TraesCS2D01G042700.1 | Wheat | nucleus | 16.18 | 19.11 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 15.9 | 18.9 |
| Bra014692.1-P | Field mustard | nucleus | 15.03 | 18.25 |
| CDX75992 | Canola | nucleus | 15.03 | 18.25 |
| CDY66845 | Canola | nucleus | 15.03 | 18.12 |
| CDY27218 | Canola | nucleus | 14.45 | 18.12 |
| CDX72140 | Canola | nucleus | 14.45 | 18.12 |
| Bra007243.1-P | Field mustard | nucleus | 14.45 | 18.12 |
| TraesCS3D01G337000.1 | Wheat | nucleus | 13.29 | 18.04 |
| AT3G56400.1 | Thale cress | nucleus | 15.32 | 18.03 |
| KRH16918 | Soybean | nucleus | 17.05 | 17.93 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 17.63 | 17.89 |
| CDY32013 | Canola | nucleus | 14.45 | 17.67 |
| VIT_08s0058g01390.t01 | Wine grape | nucleus | 18.21 | 17.65 |
| TraesCS1D01G300400.1 | Wheat | nucleus | 14.45 | 17.42 |
| TraesCS3D01G337400.1 | Wheat | nucleus | 16.18 | 17.39 |
| Bra003239.1-P | Field mustard | nucleus | 14.16 | 17.31 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 18.21 | 17.12 |
| CDX67645 | Canola | nucleus | 13.87 | 16.96 |
| CDY22474 | Canola | nucleus | 16.47 | 16.76 |
| CDY35441 | Canola | nucleus | 16.18 | 16.47 |
| Bra000203.1-P | Field mustard | nucleus | 16.18 | 16.47 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 18.5 | 16.41 |
| TraesCS1D01G300600.1 | Wheat | nucleus | 13.29 | 16.03 |
| CDY14738 | Canola | nucleus | 15.03 | 15.76 |
| AT2G40750.1 | Thale cress | nucleus | 15.61 | 15.61 |
| Bra016974.1-P | Field mustard | nucleus | 14.74 | 15.45 |
| CDY06967 | Canola | nucleus | 14.74 | 15.45 |
| CDX79972 | Canola | nucleus | 15.03 | 15.43 |
| Bra004586.1-P | Field mustard | nucleus | 15.03 | 15.34 |
| TraesCS1D01G300900.1 | Wheat | nucleus | 12.72 | 15.17 |
| CDY23883 | Canola | nucleus | 14.74 | 15.04 |
| TraesCS2D01G497600.1 | Wheat | nucleus | 14.16 | 13.54 |
| TraesCS3D01G337300.1 | Wheat | nucleus | 13.87 | 12.8 |
| TraesCS2D01G497700.1 | Wheat | nucleus | 12.43 | 11.91 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF19 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS2D01G104700 | EnsemblPlants:TraesCS2D01G104700.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2D:+:56445770..56447674
Molecular Weight (calculated)
36382.5 Da
IEP (calculated)
8.885
GRAVY (calculated)
-0.395
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSCGGAGDD GGHSRPAGVY DDLVEVREHA ATLQTMLQGS PRVSAVDARE LVKGMMAKLS SAMSVLGTTG GGVEASSGAV RGPGGRKKRS GMASGPHRRS
101: TSRRRSKSPF INMVTARTLN DGKTWRKYGQ KYIHASTNPR SYYRCSHKPD QGCQATRQVQ ESDSNPSEYI ISYYGQHTCK DPSTFRSLVI QGAADAAPPA
201: DCSNLISFTT INGAAASTST FAHRLVKEAV DLHPMLSYRF SNYSSSPPVQ EGVSSGLLSP AGHGKFMQYA GGQLVDVIGR RTSPLTVGSA PAEYWPVVGV
301: AGVDTNAGAG MDSFPSSPSS LGFMSGSLGG SFGNNIDDDD LFGFDS
101: TSRRRSKSPF INMVTARTLN DGKTWRKYGQ KYIHASTNPR SYYRCSHKPD QGCQATRQVQ ESDSNPSEYI ISYYGQHTCK DPSTFRSLVI QGAADAAPPA
201: DCSNLISFTT INGAAASTST FAHRLVKEAV DLHPMLSYRF SNYSSSPPVQ EGVSSGLLSP AGHGKFMQYA GGQLVDVIGR RTSPLTVGSA PAEYWPVVGV
301: AGVDTNAGAG MDSFPSSPSS LGFMSGSLGG SFGNNIDDDD LFGFDS
001: MDSNSNNTKS IKRKVVDQLV EGYEFATQLQ LLLSHQHSNQ YHIDETRLVS GSGSVSGGPD PVDELMSKIL GSFHKTISVL DSFDPVAVSV PIAVEGSWNA
101: SCGDDSATPV SCNGGDSGES KKKRLGVGKG KRGCYTRKTR SHTRIVEAKS SEDRYAWRKY GQKEILNTTF PRSYFRCTHK PTQGCKATKQ VQKQDQDSEM
201: FQITYIGYHT CTANDQTHAK TEPFDQEIIM DSEKTLAAST AQNHVNAMVQ EQENNTSSVT AIDAGMVKEE QNNNGDQSKD YYEGSSTGED LSLVWQETMM
301: FDDHQNHYYC GETSTTSHQF GFIDNDDQFS SFFDSYCADY ERTSAM
101: SCGDDSATPV SCNGGDSGES KKKRLGVGKG KRGCYTRKTR SHTRIVEAKS SEDRYAWRKY GQKEILNTTF PRSYFRCTHK PTQGCKATKQ VQKQDQDSEM
201: FQITYIGYHT CTANDQTHAK TEPFDQEIIM DSEKTLAAST AQNHVNAMVQ EQENNTSSVT AIDAGMVKEE QNNNGDQSKD YYEGSSTGED LSLVWQETMM
301: FDDHQNHYYC GETSTTSHQF GFIDNDDQFS SFFDSYCADY ERTSAM
Arabidopsis Description
WRKY54Probable WRKY transcription factor 54 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.