Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G104600.1 | Wheat | nucleus | 88.72 | 88.99 |
| TraesCS2D01G104700.1 | Wheat | nucleus | 90.5 | 88.15 |
| HORVU2Hr1G017740.3 | Barley | nucleus | 84.27 | 81.61 |
| TraesCS2B01G121900.1 | Wheat | nucleus | 87.54 | 77.63 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 70.92 | 68.29 |
| Zm00001d022437_P001 | Maize | mitochondrion, nucleus | 50.15 | 50.0 |
| EER99917 | Sorghum | mitochondrion, nucleus | 51.93 | 49.44 |
| Os07t0680400-01 | Rice | nucleus | 48.37 | 48.95 |
| TraesCS4A01G135000.1 | Wheat | nucleus | 29.38 | 38.98 |
| PGSC0003DMT400021625 | Potato | nucleus | 18.1 | 27.98 |
| TraesCS2A01G489500.1 | Wheat | nucleus | 22.85 | 26.19 |
| TraesCS4A01G193600.1 | Wheat | nucleus | 16.91 | 25.68 |
| TraesCS1A01G301100.1 | Wheat | plastid | 22.55 | 25.08 |
| TraesCS7A01G338500.1 | Wheat | nucleus, plastid | 26.41 | 24.25 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 21.66 | 23.62 |
| PGSC0003DMT400070939 | Potato | nucleus | 15.43 | 23.32 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 17.21 | 22.92 |
| TraesCS4A01G128100.1 | Wheat | nucleus | 13.95 | 22.82 |
| KRH09521 | Soybean | nucleus | 17.8 | 22.64 |
| TraesCS3A01G343900.1 | Wheat | nucleus | 18.1 | 22.34 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 19.58 | 22.3 |
| KRH00435 | Soybean | nucleus | 19.29 | 21.74 |
| KRH16921 | Soybean | nucleus | 15.43 | 21.67 |
| PGSC0003DMT400075091 | Potato | nucleus | 18.69 | 21.5 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 15.73 | 21.46 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 17.21 | 21.32 |
| KRH53716 | Soybean | nucleus | 20.18 | 21.32 |
| Solyc09g015770.2.1 | Tomato | extracellular, nucleus | 18.4 | 21.31 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 21.07 | 21.19 |
| KRH64216 | Soybean | nucleus | 19.88 | 21.14 |
| TraesCS2A01G043600.1 | Wheat | nucleus | 17.21 | 20.94 |
| VIT_13s0067g03140.t01 | Wine grape | nucleus | 19.29 | 20.77 |
| KRH21926 | Soybean | nucleus | 18.1 | 20.61 |
| Solyc03g095770.2.1 | Tomato | nucleus | 16.62 | 20.51 |
| TraesCS3A01G343100.1 | Wheat | nucleus | 16.02 | 20.38 |
| KRH16920 | Soybean | nucleus | 18.1 | 20.13 |
| KRH40720 | Soybean | nucleus | 17.8 | 20.0 |
| KRH21928 | Soybean | nucleus | 16.02 | 20.0 |
| PGSC0003DMT400053122 | Potato | nucleus | 16.32 | 19.86 |
| TraesCS2A01G043700.1 | Wheat | nucleus | 16.02 | 19.85 |
| KRH64882 | Soybean | nucleus | 13.65 | 19.57 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 20.18 | 19.48 |
| KRH21925 | Soybean | nucleus | 16.91 | 19.39 |
| KRH21927 | Soybean | nucleus | 17.21 | 19.33 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 13.06 | 18.88 |
| Bra007243.1-P | Field mustard | nucleus | 15.43 | 18.84 |
| CDX72140 | Canola | nucleus | 15.43 | 18.84 |
| CDY27218 | Canola | nucleus | 15.43 | 18.84 |
| Bra014692.1-P | Field mustard | nucleus | 15.73 | 18.6 |
| CDX75992 | Canola | nucleus | 15.73 | 18.6 |
| TraesCS2A01G043800.1 | Wheat | nucleus | 16.32 | 18.58 |
| TraesCS3A01G343000.1 | Wheat | nucleus | 14.24 | 18.46 |
| AT3G56400.1 | Thale cress | nucleus | 16.02 | 18.37 |
| KRH16918 | Soybean | nucleus | 17.8 | 18.24 |
| CDY66845 | Canola | nucleus | 15.43 | 18.12 |
| CDY32013 | Canola | nucleus | 15.13 | 18.02 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 18.1 | 17.78 |
| Bra003239.1-P | Field mustard | nucleus | 14.84 | 17.67 |
| CDX67645 | Canola | nucleus | 14.54 | 17.31 |
| VIT_08s0058g01390.t01 | Wine grape | nucleus | 18.1 | 17.09 |
| CDY22474 | Canola | nucleus | 17.21 | 17.06 |
| Bra000203.1-P | Field mustard | nucleus | 16.91 | 16.76 |
| CDY35441 | Canola | nucleus | 16.91 | 16.76 |
| TraesCS1A01G301000.1 | Wheat | nucleus | 13.95 | 16.38 |
| CDY14738 | Canola | nucleus | 16.02 | 16.36 |
| TraesCS3A01G343600.1 | Wheat | nucleus | 15.43 | 16.15 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 18.69 | 16.11 |
| Bra016974.1-P | Field mustard | nucleus | 15.73 | 16.06 |
| CDX79972 | Canola | nucleus | 16.02 | 16.02 |
| Bra004586.1-P | Field mustard | nucleus | 16.02 | 15.93 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 17.8 | 15.92 |
| TraesCS1A01G301200.1 | Wheat | nucleus | 13.65 | 15.86 |
| CDY06967 | Canola | nucleus | 15.43 | 15.76 |
| CDY23883 | Canola | nucleus | 15.73 | 15.63 |
| AT2G40750.1 | Thale cress | nucleus | 16.02 | 15.61 |
| TraesCS2A01G497400.1 | Wheat | nucleus | 15.43 | 14.44 |
| TraesCS3A01G343500.1 | Wheat | nucleus | 13.95 | 13.09 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF19 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS2A01G104900 | EnsemblPlants:TraesCS2A01G104900.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2A:+:57889089..57890808
Molecular Weight (calculated)
35557.3 Da
IEP (calculated)
7.855
GRAVY (calculated)
-0.427
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MASCGGAGDD GGRSPPAVVY DDLVEVREHA ATLQTMLQGS PRVLDMDARE LVKGMMAKLS SAMSVFGSTS GGVEASSGRK KRSATASGPH RRSTSRRRSK
101: SPFISMVTAR TLNDGKTWRK YGQKYIHAST NPRSYYRCSH KPDQGCQATR QVQESESNPS EYIISYYGQH TCKDPSTFRS LFIQGAADAA PPADCSNLIS
201: FTSINGAAAS TSTSAFAHCV VKEAVDLHPM LSSRFSNYSS SPPVQEGVSS GSPSPAGHGK FMQYAGGQLV DVIDQRTSPL TVGSAPAEYW PVAGDAGAGM
301: DSFPSSPSPS SLGFMSGSLG GSFGNSIYDD DLFGFDS
101: SPFISMVTAR TLNDGKTWRK YGQKYIHAST NPRSYYRCSH KPDQGCQATR QVQESESNPS EYIISYYGQH TCKDPSTFRS LFIQGAADAA PPADCSNLIS
201: FTSINGAAAS TSTSAFAHCV VKEAVDLHPM LSSRFSNYSS SPPVQEGVSS GSPSPAGHGK FMQYAGGQLV DVIDQRTSPL TVGSAPAEYW PVAGDAGAGM
301: DSFPSSPSPS SLGFMSGSLG GSFGNSIYDD DLFGFDS
001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
Arabidopsis Description
WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.