Factsheet for TraesCS3A01G343500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G337300.1	Wheat	nucleus	93.04	89.07
HORVU3Hr1G080960.1	Barley	nucleus	83.29	83.06
TraesCS2A01G497400.1	Wheat	nucleus	50.14	50.0
Zm00001d012507_P001	Maize	nucleus	32.31	32.95
EES01668	Sorghum	nucleus	34.54	32.89
TraesCS1A01G301000.1	Wheat	nucleus	19.78	24.74
TraesCS1A01G301200.1	Wheat	nucleus	19.5	24.14
TraesCS4A01G193600.1	Wheat	nucleus	12.81	20.72
TraesCS3A01G343600.1	Wheat	nucleus	18.38	20.5
TraesCS3A01G343000.1	Wheat	nucleus	14.76	20.38
TraesCS4A01G128100.1	Wheat	nucleus	11.14	19.42
TraesCS3A01G343100.1	Wheat	nucleus	14.21	19.25
TraesCS5A01G185600.1	Wheat	nucleus	17.83	18.66
TraesCS3A01G343700.1	Wheat	nucleus	13.93	18.38
TraesCS3A01G343900.1	Wheat	nucleus	13.93	18.32
TraesCS2A01G161500.1	Wheat	nucleus	15.04	18.24
TraesCS1A01G410500.1	Wheat	nucleus	12.81	18.18
TraesCS5A01G185700.1	Wheat	nucleus	17.55	18.05
TraesCS1A01G301100.1	Wheat	plastid	15.04	17.82
TraesCS1A01G410700.1	Wheat	nucleus	12.26	17.81
TraesCS1A01G410600.1	Wheat	nucleus	11.42	17.6
TraesCS1A01G300900.1	Wheat	nucleus	15.04	17.48
TraesCS2A01G043600.1	Wheat	nucleus	13.37	17.33
TraesCS2A01G489500.1	Wheat	nucleus	13.65	16.67
TraesCS2A01G043800.1	Wheat	nucleus	13.65	16.55
TraesCS2A01G043700.1	Wheat	nucleus	11.98	15.81
TraesCS4A01G135000.1	Wheat	nucleus	11.14	15.75
TraesCS2A01G104900.1	Wheat	nucleus	13.09	13.95
TraesCS2A01G104800.1	Wheat	nucleus	13.37	13.71
TraesCS6A01G080500.1	Wheat	nucleus	14.48	13.3
TraesCS7A01G116000.1	Wheat	nucleus	13.93	13.26
TraesCS7A01G338500.1	Wheat	nucleus, plastid	13.37	13.08

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31282	PANTHER:PTHR31282:SF34	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS3A01G343500	EnsemblPlants:TraesCS3A01G343500.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3A:+:592215609..592217530

Molecular Weight (calculated)

38859.0 Da

IEP (calculated)

6.348

GRAVY (calculated)

-0.404

Length

359 amino acids

Sequence
(BLAST)

001: MAFQQEAVGK LWEELGRGYN LSAKLLALLS QPSHLLDSHG QEMAVAISQQ LSQVFRASLS MSNPGNSGRM VEGRATAPEA AIMEGSISQA TPAIISGEEV
101: TPPRIGKEEE ITAEPYKDGY KWKKYGQKNI KNRKFARLYF RCMHSHERGC RAKKQVQQQD SSIGSPPLYK VIYLNEHTCH QAFPNVNITN ANVPATSTTT
201: RNGADFDHAR RHLHVGGNGE LEDRIMTSTF STVIGGAAPA APSLSPLQSP PPVEASPSDP ASYDTGGGQS PSLLDLSMCL DETMMDEMYF SCGSPFRPVE
301: APAAPWSLSS LPPPPPPPIE ASSIDPAAYM PSRGGHSLSL DAMTMAEIFL WSSPLFSPR

Best Arabidopsis Sequence Match ( AT3G56400.1 )
(BLAST)

001: MDTNKAKKLK VMNQLVEGHD LTTQLQQLLS QPGSGLEDLV AKILVCFNNT ISVLDTFEPI SSSSSLAAVE GSQNASCDND GKFEDSGDSR KRLGPVKGKR
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS

Arabidopsis Description

WRKY70Probable WRKY transcription factor 70 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY00]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.