Factsheet for TraesCS2A01G497400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G497600.1	Wheat	nucleus	89.17	88.67
TraesCS3A01G343500.1	Wheat	nucleus	50.0	50.14
Zm00001d012507_P001	Maize	nucleus	35.56	36.36
EES01668	Sorghum	nucleus	37.78	36.07
TraesCS3A01G343600.1	Wheat	nucleus	21.11	23.6
TraesCS1A01G301200.1	Wheat	nucleus	18.89	23.45
TraesCS1A01G301000.1	Wheat	nucleus	18.33	23.0
TraesCS3A01G343700.1	Wheat	nucleus	16.11	21.32
TraesCS3A01G343000.1	Wheat	nucleus	15.0	20.77
TraesCS3A01G343900.1	Wheat	nucleus	15.28	20.15
TraesCS3A01G343100.1	Wheat	nucleus	14.72	20.0
TraesCS1A01G301100.1	Wheat	plastid	16.39	19.47
TraesCS4A01G193600.1	Wheat	nucleus	11.39	18.47
TraesCS2A01G043600.1	Wheat	nucleus	13.89	18.05
TraesCS1A01G410600.1	Wheat	nucleus	11.67	18.03
TraesCS4A01G128100.1	Wheat	nucleus	10.28	17.96
TraesCS1A01G410700.1	Wheat	nucleus	12.22	17.81
TraesCS5A01G185600.1	Wheat	nucleus	16.67	17.49
TraesCS1A01G300900.1	Wheat	nucleus	15.0	17.48
TraesCS1A01G410500.1	Wheat	nucleus	12.22	17.39
TraesCS2A01G043700.1	Wheat	nucleus	13.06	17.28
TraesCS2A01G161500.1	Wheat	nucleus	14.17	17.23
TraesCS5A01G185700.1	Wheat	nucleus	16.67	17.19
TraesCS2A01G043800.1	Wheat	nucleus	13.89	16.89
TraesCS4A01G135000.1	Wheat	nucleus	11.39	16.14
TraesCS2A01G104900.1	Wheat	nucleus	14.44	15.43
TraesCS2A01G489500.1	Wheat	nucleus	12.5	15.31
TraesCS2A01G104800.1	Wheat	nucleus	14.44	14.86
TraesCS6A01G080500.1	Wheat	nucleus	15.83	14.58
TraesCS7A01G116000.1	Wheat	nucleus	14.17	13.53
TraesCS7A01G338500.1	Wheat	nucleus, plastid	13.06	12.81

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31282	PANTHER:PTHR31282:SF34	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS2A01G497400	EnsemblPlants:TraesCS2A01G497400.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:-:728229247..728231958

Molecular Weight (calculated)

38567.3 Da

IEP (calculated)

7.034

GRAVY (calculated)

-0.463

Length

360 amino acids

Sequence
(BLAST)

001: MAFGQEAIEQ LSQELVGGYN LNARLLALLR RSPLDGRGQE RAAAMSQELS RVFMVSLFML SSRESSRPVV DRMASPAATI TEGSIDERAP AKDMRICGGE
101: VAPPRKGREN EVTKKEITAS PHSDGYQWRK YGQKNIHKRK FARSYYKCMF SHDRGCRAKK TVQQHDSSSG HRPMFQITYM HEHKCQQQTV PPGEATRSGH
201: FDPQPQHAEL DDDTMASCLA MVIGGAAPAA PSSSSLSPPP VGASPSDPDG GRTPSPLDVS TGLDTGISCG LPCAPVKAPS SSSSSSLLLV EAISSSDRAV
301: YLPAGGGLSP STDAIAMDDT YFPCSPLFSP VAARSISRSD DEPMAVAGFT DTTSAWPHYS

Best Arabidopsis Sequence Match ( AT4G11070.2 )
(BLAST)

001: MEMMNWERRS LLNELIHGLK AAKQLQAILM LNGSTTQHNP TIELAPDPLA HPGKVPGSPA SITGNPRSEE FFNVRSKEFN LSSKKRKMLP KWTEQVRISP
101: ERGLEGPHDD IFSWRKYGQK DILGAKFPRS YYRCTFRNTQ YCWATKQVQR SDGDPTIFEV TYRGTHTCSQ GIPLPEKRET KPKHTVAVNY QNLRASLTVR
201: TGGLGSEAFS FPVTSPLYTY ESINGGGTFY HHVGSSGPSD FTGLISTNTS TGSSPIFDVN FQFDPTAEIN TGFPTFFHNS I

Arabidopsis Description

WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.