Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G178400.1 | Wheat | nucleus | 99.03 | 99.03 |
| TraesCS4B01G176700.1 | Wheat | nucleus | 98.06 | 98.06 |
| HORVU4Hr1G052010.2 | Barley | nucleus | 97.57 | 97.57 |
| HORVU4Hr1G051970.1 | Barley | nucleus | 51.46 | 84.8 |
| Os03t0321700-01 | Rice | nucleus | 85.44 | 83.81 |
| Zm00001d028962_P001 | Maize | nucleus | 73.79 | 71.03 |
| EER94940 | Sorghum | nucleus | 75.73 | 69.33 |
| Zm00001d021581_P001 | Maize | cytosol, mitochondrion, nucleus | 33.01 | 58.12 |
| TraesCS4A01G193600.1 | Wheat | nucleus | 39.32 | 36.49 |
| TraesCS3A01G343100.1 | Wheat | nucleus | 24.27 | 18.87 |
| TraesCS3A01G343000.1 | Wheat | nucleus | 21.36 | 16.92 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 20.39 | 16.6 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 19.42 | 16.19 |
| TraesCS4A01G135000.1 | Wheat | nucleus | 19.9 | 16.14 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 21.84 | 15.2 |
| TraesCS1A01G301000.1 | Wheat | nucleus | 20.87 | 14.98 |
| TraesCS1A01G301200.1 | Wheat | nucleus | 20.87 | 14.83 |
| TraesCS3A01G343700.1 | Wheat | nucleus | 19.42 | 14.71 |
| TraesCS3A01G343900.1 | Wheat | nucleus | 19.42 | 14.65 |
| TraesCS1A01G301100.1 | Wheat | plastid | 21.36 | 14.52 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 16.02 | 14.16 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 23.79 | 14.04 |
| TraesCS2A01G104900.1 | Wheat | nucleus | 22.82 | 13.95 |
| TraesCS1A01G300900.1 | Wheat | nucleus | 20.39 | 13.59 |
| TraesCS2A01G489500.1 | Wheat | nucleus | 18.45 | 12.93 |
| TraesCS2A01G104800.1 | Wheat | nucleus | 21.84 | 12.86 |
| TraesCS3A01G343600.1 | Wheat | nucleus | 19.9 | 12.73 |
| TraesCS2A01G043700.1 | Wheat | nucleus | 16.5 | 12.5 |
| TraesCS2A01G043600.1 | Wheat | nucleus | 16.5 | 12.27 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 19.9 | 11.95 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 21.36 | 11.67 |
| TraesCS2A01G043800.1 | Wheat | nucleus | 16.02 | 11.15 |
| TraesCS3A01G343500.1 | Wheat | nucleus | 19.42 | 11.14 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 20.87 | 11.0 |
| TraesCS7A01G338500.1 | Wheat | nucleus, plastid | 19.42 | 10.9 |
| TraesCS2A01G497400.1 | Wheat | nucleus | 17.96 | 10.28 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF13 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS4A01G128100 | EnsemblPlants:TraesCS4A01G128100.1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4A:+:165354816..165355858
Molecular Weight (calculated)
22910.6 Da
IEP (calculated)
8.207
GRAVY (calculated)
-0.767
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPVPSPNQS HLLGHGSRKE KRMRKVDTFA PHNDGHQWRK YGEKKINNCN FPRYYYRCTY KDNMNCPATK QIQQKDHSDP PLYQVTYYNE HSCNSAFLAL
101: TPTEFQLQTA SGKAVSICFD SSGAQEPGAN ASSPSSSAAP RATPSESKNK PLALRSEALS SWAPGVVEQK TACADLQSCS TECQDAYISE DIDAGRFGSI
201: RFFHFL
101: TPTEFQLQTA SGKAVSICFD SSGAQEPGAN ASSPSSSAAP RATPSESKNK PLALRSEALS SWAPGVVEQK TACADLQSCS TECQDAYISE DIDAGRFGSI
201: RFFHFL
001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
Arabidopsis Description
WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.