Factsheet for Zm00001d028962_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94940	Sorghum	nucleus	94.39	89.78
Zm00001d021581_P001	Maize	cytosol, mitochondrion, nucleus	43.46	79.49
Os03t0321700-01	Rice	nucleus	76.17	77.62
HORVU4Hr1G051970.1	Barley	nucleus	44.39	76.0
TraesCS4B01G176700.1	Wheat	nucleus	72.43	75.24
TraesCS4D01G178400.1	Wheat	nucleus	71.5	74.27
HORVU4Hr1G052010.2	Barley	nucleus	71.03	73.79
TraesCS4A01G128100.1	Wheat	nucleus	71.03	73.79
Zm00001d052357_P001	Maize	nucleus	38.32	35.96
Zm00001d043066_P001	Maize	nucleus	21.5	19.17
Zm00001d043063_P001	Maize	nucleus	21.5	17.49
Zm00001d010616_P001	Maize	nucleus, plastid	17.76	16.67
Zm00001d047523_P001	Maize	nucleus	23.83	15.69
Zm00001d010617_P001	Maize	nucleus	21.03	14.2
Zm00001d050247_P001	Maize	nucleus	21.03	14.06
Zm00001d005057_P001	Maize	nucleus	22.9	14.0
Zm00001d043060_P001	Maize	nucleus	18.69	13.99
Zm00001d012508_P001	Maize	mitochondrion	15.42	13.92
Zm00001d043062_P001	Maize	nucleus	21.03	13.51
Zm00001d032265_P001	Maize	nucleus	21.03	13.51
Zm00001d022437_P001	Maize	mitochondrion, nucleus	21.03	13.31
Zm00001d020136_P001	Maize	nucleus	18.69	13.24
Zm00001d020137_P001	Maize	nucleus	19.16	12.65
Zm00001d045283_P001	Maize	nucleus	23.36	12.63
Zm00001d052355_P001	Maize	nucleus	21.96	12.57
Zm00001d012505_P001	Maize	nucleus	14.95	12.12
Zm00001d009619_P002	Maize	nucleus	16.82	12.12
Zm00001d005622_P001	Maize	nucleus	18.69	12.08
Zm00001d036244_P001	Maize	nucleus	20.56	12.02
Zm00001d011496_P002	Maize	nucleus	16.82	11.01
Zm00001d023616_P001	Maize	plastid	19.16	10.76
Zm00001d023615_P001	Maize	plastid	19.16	10.76
Zm00001d037854_P001	Maize	extracellular	19.16	10.02
Zm00001d012507_P001	Maize	nucleus	16.36	9.94
Zm00001d044010_P001	Maize	nucleus	15.42	9.85

Protein Annotations

EntrezGene:100280812	MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:B6SMI9	EMBL:EU953954	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
ProteinID:ONL97495.1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF13	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000182BC47	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d028962	EnsemblPlants:Zm00001d028962_P001
EnsemblPlants:Zm00001d028962_T001	SEG:seg	:	:	:	:

Description

WRKY-transcription factor 32WRKY55-superfamily of TFs having WRKY and zinc finger domains

Coordinates

chr1:+:53030837..53032126

Molecular Weight (calculated)

23276.7 Da

IEP (calculated)

8.912

GRAVY (calculated)

-0.698

Length

214 amino acids

Sequence
(BLAST)

001: MSPAPSSHHS QINSRKEKRM RKVDTFAPHN DGHQWRKYGE KKINNTNFPR YYYRCTYKDN MNCPATKQVQ QKDHSDPPLY AVTYYNDHSC NSAFLPLSPS
101: EFQLQTSSGK AVSICFDSSS GTAAAAAATT NASGGSPSSS AAAAAARRGT PPEVSNPPVL RRSETYPWGA GAVEQKPASC STEYHDAFSA GAAAVPEEVV
201: DAGRFGSIRF FHFL

Best Arabidopsis Sequence Match ( AT2G46400.1 )
(BLAST)

001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS

Arabidopsis Description

WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.