Factsheet for Zm00001d036244_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d013477_P008
Zm00001d028514_P002
Zm00001d028948_P001
Zm00001d033655_P003
Zm00001d033980_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d047875_P003
Zm00001d052147_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23810.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT4G23810.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT4G23810.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d005003_P002	AT2G41100.1	17360592
AT4G23810.1	Zm00001d008278_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d010649_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d028948_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d038543_P004	AT2G41100.1	17360592
AT4G23810.1	Zm00001d038545_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d041430_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d043144_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d047597_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d052415_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d013477_P008	AT4G08500.1	17587183
AT4G23810.1	Zm00001d028514_P002	AT4G08500.1	17587183
AT4G23810.1	Zm00001d033655_P003	AT4G08500.1	17587183
AT4G23810.1	Zm00001d047875_P003	AT4G08500.1	17587183
AT4G23810.1	Zm00001d052147_P001	AT4G08500.1	17587183
AT4G23810.1	Zm00001d033980_P001	AT4G14640.1	17360592
AT4G23810.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT4G23810.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT4G23810.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER87882	Sorghum	nucleus	69.95	67.72
Zm00001d045283_P001	Maize	nucleus	71.04	65.66
TraesCS7D01G110600.1	Wheat	nucleus	45.9	45.65
Os06t0158100-00	Rice	nucleus	48.36	45.27
TraesCS7B01G012600.1	Wheat	nucleus	45.36	44.74
TraesCS7A01G116000.1	Wheat	nucleus	45.63	44.3
VIT_15s0046g01140.t01	Wine grape	nucleus	27.6	31.27
CDY03518	Canola	nucleus	26.5	30.79
Bra013732.1-P	Field mustard	nucleus	26.23	30.38
CDX94221	Canola	nucleus	26.5	30.22
CDY47621	Canola	nucleus	25.96	30.06
Bra019265.1-P	Field mustard	nucleus	26.23	29.72
GSMUA_Achr1P27980_001	Banana	nucleus	24.86	29.35
AT4G23810.1	Thale cress	nucleus	25.96	29.32
GSMUA_AchrUn_...	Banana	nucleus	23.5	29.15
PGSC0003DMT400031695	Potato	nucleus	26.78	28.91
CDY10969	Canola	nucleus	25.41	28.79
Solyc08g082110.2.1	Tomato	nucleus	26.5	28.61
AT4G11070.1	Thale cress	nucleus	24.32	28.43
PGSC0003DMT400014949	Potato	nucleus	27.6	28.06
VIT_16s0050g02510.t01	Wine grape	nucleus	27.32	27.47
KRH77637	Soybean	nucleus	24.04	27.33
CDY65042	Canola	nucleus	24.59	27.27
Solyc08g008280.2.1	Tomato	nucleus	26.78	27.22
KRH64503	Soybean	nucleus	27.05	27.2
Zm00001d011496_P002	Maize	nucleus	24.04	26.91
VIT_02s0025g01280.t01	Wine grape	nucleus	25.14	26.9
Zm00001d020136_P001	Maize	nucleus	22.13	26.82
CDY25271	Canola	nucleus	24.04	26.59
Bra033158.1-P	Field mustard	nucleus	24.04	26.59
KRH68901	Soybean	nucleus	26.23	26.52
KRH53440	Soybean	nucleus	26.23	26.37
Zm00001d050247_P001	Maize	nucleus	22.95	26.25
KRG97154	Soybean	nucleus	25.96	26.24
KRH60029	Soybean	nucleus	25.68	25.9
CDX89127	Canola	nucleus	19.4	25.63
Bra014426.1-P	Field mustard	nucleus	19.4	25.63
Zm00001d020137_P001	Maize	nucleus	22.68	25.62
Zm00001d032265_P001	Maize	nucleus	23.22	25.53
KRH47935	Soybean	nucleus	25.68	25.47
Zm00001d044010_P001	Maize	nucleus	23.22	25.37
KRH41300	Soybean	nucleus	24.86	25.35
CDX87141	Canola	nucleus	21.58	25.32
Bra026467.1-P	Field mustard	nucleus	21.58	25.32
Bra009734.1-P	Field mustard	nucleus	21.58	25.24
CDX88077	Canola	nucleus	21.58	25.24
Solyc10g009550.2.1	Tomato	nucleus	19.95	25.17
AT5G24110.1	Thale cress	nucleus	20.77	25.08
KRH06499	Soybean	nucleus	25.41	24.93
CDX80414	Canola	nucleus	21.31	24.92
PGSC0003DMT400051194	Potato	nucleus	19.67	24.83
Zm00001d005622_P001	Maize	nucleus	22.4	24.77
CDY19847	Canola	nucleus	21.04	24.68
CDX83367	Canola	nucleus	18.03	23.74
Solyc01g095630.2.1	Tomato	nucleus	21.31	23.21
Bra004540.1-P	Field mustard	nucleus	18.03	23.16
Bra000423.1-P	Field mustard	nucleus	17.76	23.13
PGSC0003DMT400000599	Potato	nucleus	21.86	23.12
Solyc05g050300.1.1	Tomato	nucleus	12.3	23.08
AT2G46400.1	Thale cress	nucleus	18.58	23.05
Solyc03g007380.1.1	Tomato	nucleus	22.13	22.95
Zm00001d009619_P002	Maize	nucleus	18.58	22.9
PGSC0003DMT400023502	Potato	nucleus	22.13	22.75
CDX80015	Canola	nucleus	18.31	22.64
CDY42043	Canola	nucleus	17.76	22.18
CDX95699	Canola	nucleus	17.21	22.11
PGSC0003DMT400046351	Potato	nucleus	17.49	21.26
Solyc05g050330.2.1	Tomato	nucleus	13.93	20.9
Zm00001d043066_P001	Maize	nucleus	13.66	20.83
Zm00001d028962_P001	Maize	nucleus	12.02	20.56
GSMUA_Achr4P15640_001	Banana	nucleus	19.4	20.34
PGSC0003DMT400084227	Potato	nucleus	15.85	19.73
Zm00001d010617_P001	Maize	nucleus	16.67	19.24
Zm00001d021581_P001	Maize	cytosol, mitochondrion, nucleus	6.01	18.8
PGSC0003DMT400084214	Potato	nucleus	16.94	18.73
Zm00001d022437_P001	Maize	mitochondrion, nucleus	16.67	18.05
Solyc05g050340.2.1	Tomato	nucleus	16.12	18.04
Zm00001d043060_P001	Maize	nucleus	13.93	17.83
Zm00001d052357_P001	Maize	nucleus	10.93	17.54
Zm00001d037854_P001	Maize	extracellular	19.13	17.11
Zm00001d043063_P001	Maize	nucleus	12.3	17.11
Zm00001d010616_P001	Maize	nucleus, plastid	10.66	17.11
Zm00001d043062_P001	Maize	nucleus	15.3	16.82
Zm00001d012505_P001	Maize	nucleus	12.02	16.67
Zm00001d005057_P001	Maize	nucleus	15.85	16.57
Zm00001d012508_P001	Maize	mitochondrion	10.66	16.46
Zm00001d052355_P001	Maize	nucleus	16.67	16.31
Zm00001d023616_P001	Maize	plastid	16.12	15.49
Zm00001d023615_P001	Maize	plastid	16.12	15.49
Zm00001d047523_P001	Maize	nucleus	12.84	14.46
Zm00001d012507_P001	Maize	nucleus	13.39	13.92
Solyc05g050310.1.1	Tomato	cytosol, nucleus	1.91	11.86
CDX80415	Canola	nucleus	4.64	11.49

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A1D6LLC5	ProteinID:AQK80490.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF24	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000843CD57
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d036244	EnsemblPlants:Zm00001d036244_P001	EnsemblPlants:Zm00001d036244_T001	SEG:seg

Description

Probable WRKY transcription factor 30

Coordinates

chr6:+:79398326..79399773

Molecular Weight (calculated)

39431.1 Da

IEP (calculated)

7.812

GRAVY (calculated)

-0.507

Length

366 amino acids

Sequence
(BLAST)

001: MQDGAGAGAE GGILQTLLAA CEEQARQLGE MIADDDPWSR TEHYRGAARR LQCTLGKALA VARAVEAAAP ASSSRGTDSP RSAGGTVAAV EQAQERQSMC
101: NKRRKGLPRR TAKIRVPDAS LEVIPDDGLS WRKYGQKDIL GAKFPRGYYR CTYRKAQACA AKKQVQRSDT DLCVFDVTYQ GEHTCHQKQR ATVASAAHGG
201: SPWLASPSPR QKQQDHPSMQ QLLGRMGVLK VETAAGLHDH DRGLASASSF SFPSVPPPFH HASEVAMDNH HTAAAAAFSP SYFSAAPRCG QAVVDGTCYD
301: VYDYEAPAGA RIHWAPESSE LGEVVSRATA APVAFDYSSL FHHQAELEPH QLPFPPFGGL PHGPYQ

Best Arabidopsis Sequence Match ( AT4G23810.1 )
(BLAST)

001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY

Arabidopsis Description

WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.