Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94221 | Canola | nucleus | 90.09 | 90.65 |
| CDY03518 | Canola | nucleus | 75.85 | 77.78 |
| CDY47621 | Canola | nucleus | 73.99 | 75.63 |
| AT4G23810.1 | Thale cress | nucleus | 74.61 | 74.38 |
| CDY65042 | Canola | nucleus | 56.04 | 54.85 |
| CDY25271 | Canola | nucleus | 55.11 | 53.78 |
| KRH41300 | Soybean | nucleus | 43.96 | 39.55 |
| PGSC0003DMT400014949 | Potato | nucleus | 42.72 | 38.33 |
| KRH60029 | Soybean | nucleus | 43.03 | 38.29 |
| Solyc08g008280.2.1 | Tomato | nucleus | 41.8 | 37.5 |
| PGSC0003DMT400031695 | Potato | nucleus | 39.01 | 37.17 |
| Solyc08g082110.2.1 | Tomato | nucleus | 39.01 | 37.17 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 39.01 | 36.84 |
| KRH77637 | Soybean | nucleus | 35.91 | 36.02 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 25.7 | 33.33 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 31.89 | 33.23 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.03 | 32.88 |
| CDX80414 | Canola | nucleus | 31.58 | 32.59 |
| CDX88077 | Canola | nucleus | 31.58 | 32.59 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 33.13 | 32.23 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 35.91 | 32.22 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 24.15 | 31.97 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 33.44 | 31.76 |
| CDX87141 | Canola | nucleus | 30.65 | 31.73 |
| CDY19847 | Canola | nucleus | 30.34 | 31.41 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 23.22 | 31.12 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 27.86 | 30.93 |
| CDX89127 | Canola | nucleus | 26.32 | 30.69 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 22.6 | 30.67 |
| CDY42043 | Canola | nucleus | 27.55 | 30.38 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 27.55 | 30.38 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 27.55 | 30.38 |
| CDX83367 | Canola | nucleus | 26.01 | 30.22 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 22.6 | 30.17 |
| CDX80015 | Canola | nucleus | 27.55 | 30.07 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 22.91 | 29.96 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 30.65 | 29.82 |
| Os11t0685700-00 | Rice | nucleus | 17.65 | 29.69 |
| CDY06968 | Canola | nucleus | 14.24 | 29.68 |
| EER96589 | Sorghum | nucleus | 28.48 | 29.68 |
| Os05t0571200-01 | Rice | nucleus | 25.39 | 29.6 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 22.6 | 29.55 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 22.6 | 29.55 |
| CDY13358 | Canola | nucleus | 14.24 | 29.49 |
| CDX95699 | Canola | nucleus | 26.01 | 29.47 |
| Os08t0386200-01 | Rice | nucleus | 29.1 | 29.47 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 23.22 | 29.41 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 22.91 | 29.25 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 27.86 | 29.22 |
| Zm00001d020136_P001 | Maize | nucleus | 27.24 | 29.14 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 22.91 | 29.13 |
| CDX80415 | Canola | nucleus | 13.31 | 29.05 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 30.65 | 29.03 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 30.34 | 28.91 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 21.98 | 28.86 |
| Zm00001d050247_P001 | Maize | nucleus | 28.48 | 28.75 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 26.32 | 28.72 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 22.91 | 28.35 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 21.36 | 28.28 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 28.17 | 28.17 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 21.36 | 28.16 |
| Os01t0656400-00 | Rice | nucleus | 23.84 | 28.1 |
| Zm00001d020137_P001 | Maize | nucleus | 28.17 | 28.09 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 21.98 | 28.06 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 30.03 | 28.03 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 29.72 | 27.99 |
| EES03370 | Sorghum | nucleus | 29.72 | 27.75 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 22.29 | 27.69 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 30.03 | 27.64 |
| Zm00001d032265_P001 | Maize | nucleus | 28.48 | 27.63 |
| EES18716 | Sorghum | nucleus | 23.22 | 27.57 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 19.81 | 27.47 |
| EER96590 | Sorghum | nucleus | 27.86 | 27.44 |
| OQU80381 | Sorghum | nucleus | 28.79 | 27.35 |
| Zm00001d005622_P001 | Maize | nucleus | 27.86 | 27.19 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 26.01 | 27.1 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 29.1 | 26.93 |
| Zm00001d011496_P002 | Maize | nucleus | 26.93 | 26.61 |
| EER87882 | Sorghum | nucleus | 30.96 | 26.45 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 29.72 | 26.09 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 19.81 | 25.7 |
| Zm00001d045283_P001 | Maize | nucleus | 31.27 | 25.51 |
| Os09t0334500-01 | Rice | nucleus | 28.48 | 25.48 |
| Zm00001d036244_P001 | Maize | nucleus | 28.79 | 25.41 |
| Zm00001d044010_P001 | Maize | nucleus | 26.32 | 25.37 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 29.1 | 25.34 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 29.41 | 25.2 |
| Os06t0158100-00 | Rice | nucleus | 30.34 | 25.06 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 26.93 | 24.93 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 30.03 | 24.74 |
| CDY71829 | Canola | nucleus | 18.27 | 23.41 |
| CDY59625 | Canola | nucleus | 18.58 | 22.73 |
| CDY35442 | Canola | nucleus | 21.05 | 22.59 |
| CDY22473 | Canola | nucleus | 20.74 | 22.33 |
| Zm00001d009619_P002 | Maize | nucleus | 20.43 | 22.22 |
| CDX75991 | Canola | nucleus | 17.96 | 21.97 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 22.29 | 21.69 |
| CDY27218 | Canola | nucleus | 17.96 | 21.01 |
| CDX72140 | Canola | nucleus | 17.34 | 20.29 |
| CDX75992 | Canola | nucleus | 17.03 | 19.3 |
| CDY22474 | Canola | nucleus | 20.12 | 19.12 |
| CDY35441 | Canola | nucleus | 20.12 | 19.12 |
| CDX67645 | Canola | nucleus | 16.72 | 19.08 |
| CDY32013 | Canola | nucleus | 16.72 | 19.08 |
| CDY66845 | Canola | nucleus | 16.41 | 18.47 |
| CDY23883 | Canola | nucleus | 19.2 | 18.29 |
| CDX79972 | Canola | nucleus | 18.89 | 18.1 |
| CDY14738 | Canola | nucleus | 17.96 | 17.58 |
| CDY06967 | Canola | nucleus | 17.65 | 17.27 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078FDE6 | UniProt:A0A078FDE6 | EnsemblPlants:CDY10969 | ProteinID:CDY10969 |
| ProteinID:CDY10969.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00048907001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 |
| PANTHER:PTHR32096:SF36 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEDEBF | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g46280DBnaA03g46280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDE6]
Coordinates
chrLK032008:-:387057..388227
Molecular Weight (calculated)
36193.4 Da
IEP (calculated)
6.067
GRAVY (calculated)
-0.667
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGKKDMLSW EQKTLVNELI FGLEAAKKLQ ARLGEPSSSP PSSSSRAAEM NEILLKQIIS SYEKSLVMLN WSSLPPVQLI LKAGSVAPVT HSGVIPESPA
101: SINGSPRSED FLDGGGSSNT HRQEHVFNSK KRKMLPKWTE KVRISPERGL EGSQQDDVYS WRKYGQKDIL GAKFPRSYYR CTHRSTQNCW ATKQLQRSDN
201: DPTVFEVTYR GTHTCSRATA AAPPPPASPE KQDTRTKPQI AQTPNELLES LKTSLTVRTE GLDDGEDVFS FPNTPPFYDY GNTNDYFGGL MESSPIFDVV
301: DWFNPTVEIN PEFPTFLPDS IYY
101: SINGSPRSED FLDGGGSSNT HRQEHVFNSK KRKMLPKWTE KVRISPERGL EGSQQDDVYS WRKYGQKDIL GAKFPRSYYR CTHRSTQNCW ATKQLQRSDN
201: DPTVFEVTYR GTHTCSRATA AAPPPPASPE KQDTRTKPQI AQTPNELLES LKTSLTVRTE GLDDGEDVFS FPNTPPFYDY GNTNDYFGGL MESSPIFDVV
301: DWFNPTVEIN PEFPTFLPDS IYY
001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
Arabidopsis Description
WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.