Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019265.1-P | Field mustard | nucleus | 91.28 | 90.71 |
| CDY10969 | Canola | nucleus | 90.65 | 90.09 |
| CDY03518 | Canola | nucleus | 75.39 | 76.83 |
| CDY47621 | Canola | nucleus | 73.21 | 74.37 |
| AT4G23810.1 | Thale cress | nucleus | 74.14 | 73.46 |
| CDY65042 | Canola | nucleus | 55.76 | 54.24 |
| CDY25271 | Canola | nucleus | 54.83 | 53.17 |
| KRH41300 | Soybean | nucleus | 44.24 | 39.55 |
| PGSC0003DMT400014949 | Potato | nucleus | 43.3 | 38.61 |
| KRH60029 | Soybean | nucleus | 43.61 | 38.57 |
| Solyc08g008280.2.1 | Tomato | nucleus | 42.06 | 37.5 |
| PGSC0003DMT400031695 | Potato | nucleus | 39.25 | 37.17 |
| Solyc08g082110.2.1 | Tomato | nucleus | 39.25 | 37.17 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 39.56 | 37.13 |
| KRH77637 | Soybean | nucleus | 37.07 | 36.96 |
| CDX88077 | Canola | nucleus | 33.02 | 33.87 |
| CDX80414 | Canola | nucleus | 32.71 | 33.55 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 31.78 | 32.9 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.22 | 32.88 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 24.92 | 32.79 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 25.23 | 32.53 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 33.64 | 32.53 |
| CDX80415 | Canola | nucleus | 14.64 | 31.76 |
| CDX87141 | Canola | nucleus | 30.84 | 31.73 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 28.66 | 31.62 |
| CDY19847 | Canola | nucleus | 30.53 | 31.41 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 28.66 | 31.4 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 28.66 | 31.4 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 35.2 | 31.39 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 23.36 | 31.12 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 22.74 | 30.67 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 32.4 | 30.59 |
| Os08t0386200-01 | Rice | nucleus | 30.22 | 30.41 |
| CDX89127 | Canola | nucleus | 26.17 | 30.32 |
| CDY06968 | Canola | nucleus | 14.64 | 30.32 |
| Os11t0685700-00 | Rice | nucleus | 18.07 | 30.21 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 22.74 | 30.17 |
| CDY13358 | Canola | nucleus | 14.64 | 30.13 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 23.05 | 29.96 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 28.66 | 29.87 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 30.84 | 29.82 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 27.41 | 29.73 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 22.74 | 29.55 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 23.36 | 29.53 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 22.43 | 29.51 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 23.36 | 29.41 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 23.05 | 29.25 |
| Os05t0571200-01 | Rice | nucleus | 25.23 | 29.24 |
| EER96589 | Sorghum | nucleus | 28.04 | 29.03 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 30.84 | 29.03 |
| CDY42043 | Canola | nucleus | 26.48 | 29.01 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 30.53 | 28.91 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 22.12 | 28.86 |
| Zm00001d020136_P001 | Maize | nucleus | 27.1 | 28.81 |
| CDX83367 | Canola | nucleus | 24.92 | 28.78 |
| Zm00001d050247_P001 | Maize | nucleus | 28.66 | 28.75 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 22.12 | 28.74 |
| CDX80015 | Canola | nucleus | 26.48 | 28.72 |
| Os01t0656400-00 | Rice | nucleus | 24.3 | 28.47 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 23.05 | 28.35 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 28.35 | 28.17 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 21.5 | 28.16 |
| CDX95699 | Canola | nucleus | 24.92 | 28.07 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 22.12 | 28.06 |
| EES03370 | Sorghum | nucleus | 30.22 | 28.03 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 30.22 | 28.03 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 29.91 | 27.99 |
| EES18716 | Sorghum | nucleus | 23.68 | 27.94 |
| Zm00001d032265_P001 | Maize | nucleus | 28.97 | 27.93 |
| Zm00001d020137_P001 | Maize | nucleus | 28.04 | 27.78 |
| EER96590 | Sorghum | nucleus | 28.35 | 27.74 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 22.43 | 27.69 |
| OQU80381 | Sorghum | nucleus | 29.28 | 27.65 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 30.22 | 27.64 |
| Zm00001d011496_P002 | Maize | nucleus | 28.04 | 27.52 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 19.94 | 27.47 |
| Zm00001d005622_P001 | Maize | nucleus | 28.04 | 27.19 |
| EER87882 | Sorghum | nucleus | 31.78 | 26.98 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 29.28 | 26.93 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 30.84 | 26.9 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 25.86 | 26.77 |
| Zm00001d036244_P001 | Maize | nucleus | 30.22 | 26.5 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 20.25 | 26.1 |
| Zm00001d045283_P001 | Maize | nucleus | 32.09 | 26.01 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 30.53 | 25.99 |
| Zm00001d044010_P001 | Maize | nucleus | 27.1 | 25.97 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 29.91 | 25.88 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 28.04 | 25.79 |
| Os09t0334500-01 | Rice | nucleus | 28.97 | 25.76 |
| Os06t0158100-00 | Rice | nucleus | 30.84 | 25.32 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 30.84 | 25.26 |
| CDY59625 | Canola | nucleus | 19.0 | 23.11 |
| CDY71829 | Canola | nucleus | 18.07 | 23.02 |
| Zm00001d009619_P002 | Maize | nucleus | 20.87 | 22.56 |
| CDX75991 | Canola | nucleus | 18.38 | 22.35 |
| CDY35442 | Canola | nucleus | 20.87 | 22.26 |
| CDY22473 | Canola | nucleus | 20.56 | 22.0 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 22.74 | 21.99 |
| CDY27218 | Canola | nucleus | 18.69 | 21.74 |
| CDX72140 | Canola | nucleus | 18.07 | 21.01 |
| CDX67645 | Canola | nucleus | 17.13 | 19.43 |
| CDY32013 | Canola | nucleus | 17.13 | 19.43 |
| CDX75992 | Canola | nucleus | 17.13 | 19.3 |
| CDY22474 | Canola | nucleus | 20.25 | 19.12 |
| CDY35441 | Canola | nucleus | 20.25 | 19.12 |
| CDY66845 | Canola | nucleus | 16.51 | 18.47 |
| CDY23883 | Canola | nucleus | 19.0 | 17.99 |
| CDX79972 | Canola | nucleus | 18.69 | 17.8 |
| CDY14738 | Canola | nucleus | 17.76 | 17.27 |
| CDY06967 | Canola | nucleus | 17.45 | 16.97 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078DYE4 | EnsemblPlants:CDX94221 | ProteinID:CDX94221 | ProteinID:CDX94221.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00157168001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 |
| PANTHER:PTHR32096:SF36 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EAC310 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC07g38550D
Coordinates
chrLK031879:-:1414586..1415743
Molecular Weight (calculated)
35983.4 Da
IEP (calculated)
6.684
GRAVY (calculated)
-0.630
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGKKDMLNW EQKTLVSELI SGLEAAKKLQ ARLGEPSSLP PSSSSRAAEM NEILMKQILS SYEKSLAIVN WSSAPPVQLI LKAGSIAPVT LIPESPVSIN
101: GSPRSEDFLD GRGSSNTHRQ NHLFNSKKRK MLPKWTEKVR MSPERGLEGP HQDDVYSWRK YGQKDILGAK FPRSYYRCTH RSTQNCWATK QVQRSDSDST
201: VFEVTYRGTH TCSRATAAAP PPPASPEKQD TITKPPIAQK PNDLLESLKT SLTVRTEGLD EGEDVFSLFP NTPPFYDYGT PNDYFGGLME SSPIFDVVDW
301: FNPTVEINPE FPTFLPDSIY Y
101: GSPRSEDFLD GRGSSNTHRQ NHLFNSKKRK MLPKWTEKVR MSPERGLEGP HQDDVYSWRK YGQKDILGAK FPRSYYRCTH RSTQNCWATK QVQRSDSDST
201: VFEVTYRGTH TCSRATAAAP PPPASPEKQD TITKPPIAQK PNDLLESLKT SLTVRTEGLD EGEDVFSLFP NTPPFYDYGT PNDYFGGLME SSPIFDVVDW
301: FNPTVEINPE FPTFLPDSIY Y
001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
Arabidopsis Description
WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.