Factsheet for Zm00001d044010_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d013477_P008
Zm00001d028514_P002
Zm00001d028948_P001
Zm00001d033655_P003
Zm00001d033980_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d047875_P003
Zm00001d052147_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23810.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT4G23810.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT4G23810.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT4G23810.1	Zm00001d005003_P002	AT2G41100.1	17360592
AT4G23810.1	Zm00001d008278_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d010649_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d028948_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d038543_P004	AT2G41100.1	17360592
AT4G23810.1	Zm00001d038545_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d041430_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d043144_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d047597_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d052415_P001	AT2G41100.1	17360592
AT4G23810.1	Zm00001d013477_P008	AT4G08500.1	17587183
AT4G23810.1	Zm00001d028514_P002	AT4G08500.1	17587183
AT4G23810.1	Zm00001d033655_P003	AT4G08500.1	17587183
AT4G23810.1	Zm00001d047875_P003	AT4G08500.1	17587183
AT4G23810.1	Zm00001d052147_P001	AT4G08500.1	17587183
AT4G23810.1	Zm00001d033980_P001	AT4G14640.1	17360592
AT4G23810.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT4G23810.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT4G23810.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT4G23810.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011496_P002	Maize	nucleus	75.22	77.06
EES03370	Sorghum	nucleus	78.81	76.3
HORVU3Hr1G059220.1	Barley	nucleus	48.66	52.92
TraesCS3D01G238300.1	Wheat	nucleus	45.07	51.89
Os01t0656400-00	Rice	nucleus	42.09	51.46
HORVU3Hr1G059210.1	Barley	nucleus	37.01	50.82
Zm00001d009619_P002	Maize	nucleus	29.85	33.67
GSMUA_Achr3P15840_001	Banana	nucleus	23.28	31.33
VIT_15s0046g01140.t01	Wine grape	nucleus	28.96	30.03
GSMUA_Achr3P25080_001	Banana	nucleus	29.55	29.82
AT4G11070.1	Thale cress	nucleus	25.67	27.48
AT4G23810.1	Thale cress	nucleus	26.57	27.47
CDY65042	Canola	nucleus	26.87	27.27
VIT_02s0025g01280.t01	Wine grape	nucleus	27.76	27.19
Bra033158.1-P	Field mustard	nucleus	26.87	27.19
CDY25271	Canola	nucleus	26.87	27.19
CDX94221	Canola	nucleus	25.97	27.1
PGSC0003DMT400031695	Potato	nucleus	27.16	26.84
Bra019265.1-P	Field mustard	nucleus	25.67	26.63
Zm00001d050247_P001	Maize	nucleus	25.37	26.56
Zm00001d032265_P001	Maize	nucleus	26.27	26.43
CDY03518	Canola	nucleus	24.78	26.35
CDY10969	Canola	nucleus	25.37	26.32
Bra013732.1-P	Field mustard	nucleus	24.78	26.27
Solyc08g082110.2.1	Tomato	nucleus	26.57	26.25
Zm00001d020136_P001	Maize	nucleus	23.58	26.16
VIT_16s0050g02510.t01	Wine grape	nucleus	28.36	26.1
CDY47621	Canola	nucleus	24.48	25.95
Zm00001d020137_P001	Maize	nucleus	25.07	25.93
PGSC0003DMT400014949	Potato	nucleus	27.76	25.83
Zm00001d005622_P001	Maize	nucleus	25.37	25.68
KRH41300	Soybean	nucleus	27.46	25.63
KRH77637	Soybean	nucleus	24.48	25.47
Solyc08g008280.2.1	Tomato	nucleus	27.16	25.28
PGSC0003DMT400051194	Potato	nucleus	21.49	24.83
KRH60029	Soybean	nucleus	26.87	24.79
Solyc10g009550.2.1	Tomato	nucleus	21.19	24.48
KRG97154	Soybean	nucleus	26.27	24.31
KRH68901	Soybean	nucleus	26.27	24.31
Bra026467.1-P	Field mustard	nucleus	22.09	23.72
CDX87141	Canola	nucleus	22.09	23.72
CDY19847	Canola	nucleus	21.79	23.4
Zm00001d036244_P001	Maize	nucleus	25.37	23.22
KRH06499	Soybean	nucleus	25.67	23.06
Zm00001d045283_P001	Maize	nucleus	26.87	22.73
CDX88077	Canola	nucleus	21.19	22.68
Bra009734.1-P	Field mustard	nucleus	21.19	22.68
CDX80414	Canola	nucleus	21.19	22.68
KRH53440	Soybean	nucleus	24.48	22.53
KRH64503	Soybean	nucleus	24.48	22.53
KRH47935	Soybean	nucleus	24.78	22.49
Bra004540.1-P	Field mustard	nucleus	19.1	22.46
AT5G24110.1	Thale cress	nucleus	20.3	22.44
CDX89127	Canola	nucleus	18.51	22.38
Bra014426.1-P	Field mustard	nucleus	18.51	22.38
AT2G46400.1	Thale cress	nucleus	19.7	22.37
CDX80015	Canola	nucleus	19.7	22.3
CDY42043	Canola	nucleus	19.4	22.18
Bra000423.1-P	Field mustard	nucleus	18.51	22.06
Solyc03g007380.1.1	Tomato	nucleus	22.99	21.81
CDX95699	Canola	nucleus	18.51	21.75
CDX83367	Canola	nucleus	17.91	21.58
PGSC0003DMT400000599	Potato	nucleus	21.79	21.1
PGSC0003DMT400023502	Potato	nucleus	22.39	21.07
Solyc05g050330.2.1	Tomato	nucleus	14.93	20.49
Solyc01g095630.2.1	Tomato	nucleus	20.0	19.94
Solyc05g050300.1.1	Tomato	nucleus	11.34	19.49
PGSC0003DMT400084227	Potato	nucleus	16.42	18.71
PGSC0003DMT400084214	Potato	nucleus	18.21	18.43
Zm00001d022437_P001	Maize	mitochondrion, nucleus	18.51	18.34
PGSC0003DMT400046351	Potato	nucleus	16.42	18.27
Zm00001d043063_P001	Maize	nucleus	14.33	18.25
CDX80415	Canola	nucleus	7.76	17.57
Zm00001d010617_P001	Maize	nucleus	16.42	17.35
Solyc05g050340.2.1	Tomato	nucleus	16.72	17.13
Solyc05g050310.1.1	Tomato	cytosol, nucleus	2.99	16.95
Zm00001d043066_P001	Maize	nucleus	11.94	16.67
Zm00001d021581_P001	Maize	cytosol, mitochondrion, nucleus	5.67	16.24
Zm00001d043060_P001	Maize	nucleus	13.73	16.08
Zm00001d028962_P001	Maize	nucleus	9.85	15.42
Zm00001d010616_P001	Maize	nucleus, plastid	10.45	15.35
Zm00001d052355_P001	Maize	nucleus	17.01	15.24
Zm00001d012505_P001	Maize	nucleus	11.94	15.15
Zm00001d047523_P001	Maize	nucleus	14.63	15.08
Zm00001d052357_P001	Maize	nucleus	10.15	14.91
Zm00001d005057_P001	Maize	nucleus	15.22	14.57
Zm00001d023616_P001	Maize	plastid	16.42	14.44
Zm00001d023615_P001	Maize	plastid	16.42	14.44
Zm00001d043062_P001	Maize	nucleus	14.03	14.11
Zm00001d037854_P001	Maize	extracellular	16.72	13.69
Zm00001d012507_P001	Maize	nucleus	14.03	13.35
Zm00001d012508_P001	Maize	mitochondrion	7.46	10.55

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A1D6NGZ4	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	ProteinID:ONM39677.1
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF52	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI0008440F26	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d044010	EnsemblPlants:Zm00001d044010_P001	EnsemblPlants:Zm00001d044010_T001
SEG:seg	:	:	:	:	:

Description

WRKY-transcription factor 74Probable WRKY transcription factor 30

Coordinates

chr3:+:216438639..216439909

Molecular Weight (calculated)

34864.9 Da

IEP (calculated)

7.283

GRAVY (calculated)

-0.341

Length

335 amino acids

Sequence
(BLAST)

001: MEGVPDEKCA LVAELVQVLE MARHLETRMA VLQQQGGGEH QQCRALLSTM RASIDRAVHL AVSCRAEAAR PESPPSGGDG SPRSGSGGSD QAGEVRGRGN
101: ATGQCKKRSY HRIRTRRKAL PKSSIQVRVS TVQDVSPLDD GLSWRKYGQK DILGAKYPRH TQSCQASKQV QRTDGDPLLF DVVYHGTHTC AQAAAAAAHH
201: HGNNHPATDQ ATSPGCVVAG PAALPFSLRP AASNKPTGAA ADDGATSSRF IATGCTVVTA SPFVYPATPD CQLVSGGGGG GYAVGGGGGV AGVPNVPDVE
301: LASTTNSPMA MGEMDFMFPL DAADFLELEN PASYF

Best Arabidopsis Sequence Match ( AT4G11070.2 )
(BLAST)

001: MEMMNWERRS LLNELIHGLK AAKQLQAILM LNGSTTQHNP TIELAPDPLA HPGKVPGSPA SITGNPRSEE FFNVRSKEFN LSSKKRKMLP KWTEQVRISP
101: ERGLEGPHDD IFSWRKYGQK DILGAKFPRS YYRCTFRNTQ YCWATKQVQR SDGDPTIFEV TYRGTHTCSQ GIPLPEKRET KPKHTVAVNY QNLRASLTVR
201: TGGLGSEAFS FPVTSPLYTY ESINGGGTFY HHVGSSGPSD FTGLISTNTS TGSSPIFDVN FQFDPTAEIN TGFPTFFHNS I

Arabidopsis Description

WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.