Factsheet for Zm00001d005057_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82725	Sorghum	nucleus	68.0	71.26
EES09135	Sorghum	nucleus	73.43	71.19
Zm00001d052355_P001	Maize	nucleus	71.71	67.11
Zm00001d052357_P001	Maize	nucleus	16.86	25.88
Zm00001d010616_P001	Maize	nucleus, plastid	16.57	25.44
Zm00001d028962_P001	Maize	nucleus	14.0	22.9
Zm00001d043066_P001	Maize	nucleus	15.43	22.5
Zm00001d050247_P001	Maize	nucleus	20.0	21.88
Zm00001d032265_P001	Maize	nucleus	19.71	20.72
Zm00001d012507_P001	Maize	nucleus	20.57	20.45
Zm00001d020136_P001	Maize	nucleus	15.71	18.21
Zm00001d012508_P001	Maize	mitochondrion	12.29	18.14
Zm00001d043063_P001	Maize	nucleus	13.14	17.49
Zm00001d011496_P002	Maize	nucleus	16.29	17.43
Zm00001d047523_P001	Maize	nucleus	16.0	17.23
Zm00001d043062_P001	Maize	nucleus	16.29	17.12
Zm00001d010617_P001	Maize	nucleus	15.14	16.72
Zm00001d005622_P001	Maize	nucleus	15.71	16.62
Zm00001d043060_P001	Maize	nucleus	13.43	16.43
Zm00001d020137_P001	Maize	nucleus	15.14	16.36
Zm00001d021581_P001	Maize	cytosol, mitochondrion, nucleus	5.43	16.24
Zm00001d022437_P001	Maize	mitochondrion, nucleus	15.43	15.98
Zm00001d036244_P001	Maize	nucleus	16.57	15.85
Zm00001d009619_P002	Maize	nucleus	13.43	15.82
Zm00001d012505_P001	Maize	nucleus	11.71	15.53
Zm00001d045283_P001	Maize	nucleus	17.43	15.4
Zm00001d044010_P001	Maize	nucleus	14.57	15.22
Zm00001d023616_P001	Maize	plastid	15.71	14.44
Zm00001d023615_P001	Maize	plastid	15.71	14.44
Zm00001d037854_P001	Maize	extracellular	16.0	13.69

Protein Annotations

EntrezGene:103647154	MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A1D6EIZ9	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	ProteinID:ONM20072.1
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF13	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI000221C0FE	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d005057	EnsemblPlants:Zm00001d005057_P001	EnsemblPlants:Zm00001d005057_T001
SEG:seg	:	:	:	:	:

Description

WRKY-transcription factor 24Probable WRKY transcription factor 30

Coordinates

chr2:+:156441979..156443513

Molecular Weight (calculated)

37608.1 Da

IEP (calculated)

6.426

GRAVY (calculated)

-0.425

Length

350 amino acids

Sequence
(BLAST)

001: MACVADRQAA VREVAQVYEL IKLQQPLLLL HSSSSHLAQS LLGKALRALN VALSVMNQQQ PPPPPPAVAP VTVVVVKAEP HLSPPSPASA DSEATAPPAR
101: RGAKRTRRSA APVGGKKNSS SWATLTAVPY DDGYEWRKYG EKKINGTLFT RSYFRCTYKD DAGCLATKHV QQMDSDDNSS PPMFHVTYHN DHTCSSAKAA
201: AKANTGSSSN NNSHLAALLA DCCDGSGCNK GLTTTTINGH AAAAAAAMNM NMKQEPSLLP PPPPLAEPPS ACFPYDQMPQ QCHQLLFPVS MEQQFPGNGE
301: EIPSAAGSCI SGETSWDGYY YSGDMAAAED DRFHDLERFL LGDSFMDYQY

Best Arabidopsis Sequence Match ( AT3G56400.1 )
(BLAST)

001: MDTNKAKKLK VMNQLVEGHD LTTQLQQLLS QPGSGLEDLV AKILVCFNNT ISVLDTFEPI SSSSSLAAVE GSQNASCDND GKFEDSGDSR KRLGPVKGKR
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS

Arabidopsis Description

WRKY70Probable WRKY transcription factor 70 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY00]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.