Factsheet for Zm00001d010616_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19695	Sorghum	nucleus	84.21	81.7
TraesCS1A01G301200.1	Wheat	nucleus	63.6	50.0
TraesCS1B01G311000.1	Wheat	nucleus	62.72	49.65
TraesCS1D01G300900.1	Wheat	nucleus	62.72	49.31
HORVU1Hr1G069610.1	Barley	nucleus	61.4	48.44
TraesCS1A01G301000.1	Wheat	nucleus	57.02	45.3
TraesCS1B01G310900.1	Wheat	nucleus	56.58	45.1
TraesCS1D01G300400.1	Wheat	nucleus	56.58	44.95
TraesCS1D01G300600.1	Wheat	nucleus	56.58	44.95
HORVU0Hr1G023420.1	Barley	nucleus, plastid	61.4	44.87
HORVU1Hr1G069640.2	Barley	nucleus	56.58	44.03
Os05t0478700-00	Rice	nucleus	47.81	38.93
Zm00001d052357_P001	Maize	nucleus	19.74	19.74
Zm00001d043066_P001	Maize	nucleus	20.61	19.58
Zm00001d028962_P001	Maize	nucleus	16.67	17.76
Zm00001d005057_P001	Maize	nucleus	25.44	16.57
Zm00001d043062_P001	Maize	nucleus	24.12	16.52
Zm00001d012507_P001	Maize	nucleus	25.44	16.48
Zm00001d043060_P001	Maize	nucleus	19.74	15.73
Zm00001d043063_P001	Maize	nucleus	17.98	15.59
Zm00001d052355_P001	Maize	nucleus	23.68	14.44
Zm00001d010617_P001	Maize	nucleus	19.3	13.88
Zm00001d032265_P001	Maize	nucleus	20.18	13.81
Zm00001d009619_P002	Maize	nucleus	17.54	13.47
Zm00001d020136_P001	Maize	nucleus	17.54	13.24
Zm00001d050247_P001	Maize	nucleus	18.42	13.12
Zm00001d012508_P001	Maize	mitochondrion	13.6	13.08
Zm00001d047523_P001	Maize	nucleus	18.42	12.92
Zm00001d012505_P001	Maize	nucleus	14.91	12.88
Zm00001d021581_P001	Maize	cytosol, mitochondrion, nucleus	6.58	12.82
Zm00001d020137_P001	Maize	nucleus	17.54	12.35
Zm00001d011496_P002	Maize	nucleus	17.54	12.23
Zm00001d005622_P001	Maize	nucleus	17.54	12.08
Zm00001d022437_P001	Maize	mitochondrion, nucleus	16.23	10.95
Zm00001d037854_P001	Maize	extracellular	19.3	10.76
Zm00001d036244_P001	Maize	nucleus	17.11	10.66
Zm00001d045283_P001	Maize	nucleus	18.42	10.61
Zm00001d023616_P001	Maize	plastid	17.54	10.5
Zm00001d023615_P001	Maize	plastid	17.54	10.5
Zm00001d044010_P001	Maize	nucleus	15.35	10.45

Protein Annotations

EntrezGene:103635796	MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:AQK94473.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:K7V4I1
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF24	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI000220B268	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d010616	EnsemblPlants:Zm00001d010616_P001	EnsemblPlants:Zm00001d010616_T001
SEG:seg	:	:	:	:	:

Description

WRKY-transcription factor 89Putative WRKY DNA-binding domain superfamily protein

Coordinates

chr8:-:121973116..121975989

Molecular Weight (calculated)

25361.9 Da

IEP (calculated)

7.663

GRAVY (calculated)

-0.652

Length

228 amino acids

Sequence
(BLAST)

001: MPLSPPPPSS SPRQAAIQEL RRGTQLAELL RQQVELIPEP NRRHAAAVNV GEISMAMESS LSILQSQMEH PFSEPEVMAA ALTAHSDGGT SGERNGGPVA
101: RTRKVRVRHR PGRGRPAAGD ELPIKEILTE APENDRFHWR KYGEKNILYS EYPRLYYKCG YSDDHKCPAK KYVQQQSNSY PPIFLVTLIN EHTCDALFRD
201: DEPIISSSSS GSSQVLDFTK ASLSSPLH

Best Arabidopsis Sequence Match ( AT5G01900.1 )
(BLAST)

001: MNSCQQKAME KLLHGHGCAN QLLIMDQTES DSSMEREDLA KSVLHCFSDA LSILIDTNDH QDDQSNNSSP QDSSPVLESS RKPLHKRGRK TSMAESSDYH
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS

Arabidopsis Description

WRKY62WRKY62 [Source:UniProtKB/TrEMBL;Acc:A0A178U8T9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.