Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03804 | Sorghum | nucleus | 80.78 | 80.78 |
| TraesCS3D01G337400.1 | Wheat | nucleus | 52.25 | 54.04 |
| TraesCS3A01G343600.1 | Wheat | nucleus | 51.95 | 53.73 |
| TraesCS3B01G375600.1 | Wheat | nucleus | 51.35 | 53.11 |
| HORVU3Hr1G081000.3 | Barley | plastid | 28.23 | 47.47 |
| Os01t0821300-01 | Rice | cytosol, nucleus | 18.62 | 32.8 |
| Zm00001d010616_P001 | Maize | nucleus, plastid | 16.52 | 24.12 |
| Zm00001d043066_P001 | Maize | nucleus | 15.92 | 22.08 |
| Zm00001d028962_P001 | Maize | nucleus | 13.51 | 21.03 |
| Zm00001d050247_P001 | Maize | nucleus | 19.82 | 20.62 |
| Zm00001d052357_P001 | Maize | nucleus | 13.81 | 20.18 |
| Zm00001d020137_P001 | Maize | nucleus | 19.52 | 20.06 |
| Zm00001d012507_P001 | Maize | nucleus | 21.02 | 19.89 |
| Zm00001d021581_P001 | Maize | cytosol, mitochondrion, nucleus | 6.91 | 19.66 |
| Zm00001d005622_P001 | Maize | nucleus | 19.52 | 19.64 |
| Zm00001d020136_P001 | Maize | nucleus | 17.72 | 19.54 |
| Zm00001d032265_P001 | Maize | nucleus | 19.52 | 19.52 |
| Zm00001d043063_P001 | Maize | nucleus | 14.41 | 18.25 |
| Zm00001d022437_P001 | Maize | mitochondrion, nucleus | 18.32 | 18.05 |
| Zm00001d043060_P001 | Maize | nucleus | 15.32 | 17.83 |
| Zm00001d052355_P001 | Maize | nucleus | 19.52 | 17.38 |
| Zm00001d010617_P001 | Maize | nucleus | 16.22 | 17.03 |
| Zm00001d012508_P001 | Maize | mitochondrion | 11.71 | 16.46 |
| Zm00001d012505_P001 | Maize | nucleus | 12.91 | 16.29 |
| Zm00001d005057_P001 | Maize | nucleus | 17.12 | 16.29 |
| Zm00001d011496_P002 | Maize | nucleus | 15.92 | 16.21 |
| Zm00001d045283_P001 | Maize | nucleus | 18.62 | 15.66 |
| Zm00001d047523_P001 | Maize | nucleus | 15.02 | 15.38 |
| Zm00001d036244_P001 | Maize | nucleus | 16.82 | 15.3 |
| Zm00001d009619_P002 | Maize | nucleus | 13.51 | 15.15 |
| Zm00001d037854_P001 | Maize | extracellular | 17.42 | 14.18 |
| Zm00001d044010_P001 | Maize | nucleus | 14.11 | 14.03 |
| Zm00001d023616_P001 | Maize | plastid | 15.92 | 13.91 |
| Zm00001d023615_P001 | Maize | plastid | 15.92 | 13.91 |
Protein Annotations
| EntrezGene:100281370 | MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:B6SUS2 | EMBL:BT063861 | EMBL:EU956487 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 |
| InterPro:IPR036576 | ProteinID:ONM36796.1 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF13 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000182B119 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | EnsemblPlantsGene:Zm00001d043062 |
| EnsemblPlants:Zm00001d043062_P001 | EnsemblPlants:Zm00001d043062_T001 | SEG:seg | : | : | : |
Description
WRKY-transcription factor 40Probable WRKY transcription factor 30
Coordinates
chr3:+:187858083..187861043
Molecular Weight (calculated)
35836.9 Da
IEP (calculated)
5.875
GRAVY (calculated)
-0.526
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTQSRLAMS GGGGSGGSSS SSASEDEHEA VIRELTRGHE LTAQLRAEAL RALRGQGQAE ATAAFILQEV SRAFTVCLSI MSSPARAPPP TMEMPAPALA
101: PRRGRDDSIP REQRRTSSPH SDGYQWRKYG QKRITKSPFP RCYYKCSFHR ERSCRATKQV QQCSDGDGHP PQYVVMYFNE HTCDTAAWEP AAAAAASSGV
201: PLDDLSRSRL QAVLGQGQQG ARALLLDERG VQEEHERRLL VSSLACVLGG QQQQSPAGSG TTTAVDPAVN VGQEQEPPPP RARTPAAVDA AGEMPRIIGV
301: DVAGLDVMDY DVTDALCLAH SYDDLPDDGF PFC
101: PRRGRDDSIP REQRRTSSPH SDGYQWRKYG QKRITKSPFP RCYYKCSFHR ERSCRATKQV QQCSDGDGHP PQYVVMYFNE HTCDTAAWEP AAAAAASSGV
201: PLDDLSRSRL QAVLGQGQQG ARALLLDERG VQEEHERRLL VSSLACVLGG QQQQSPAGSG TTTAVDPAVN VGQEQEPPPP RARTPAAVDA AGEMPRIIGV
301: DVAGLDVMDY DVTDALCLAH SYDDLPDDGF PFC
001: MEMNSPHEKA VQAIRYGHSC AMRLKRRLNH PMADGGPLSS YDLAKSIVES FSNAISILSA KPETEDDQFS DLSSRDSSPP PQGSPSKKRK IDSTNSSENW
101: RDDSPDPIYY DGYLWRKYGQ KSIKKSNHQR SYYRCSYNKD HNCEARKHEQ KIKDNPPVYR TTYFGHHTCK TEHNLDAIFI AGQDPLDDFK STQMIRFGKD
201: QDQEKESRSN GFSLSVKHEE DIIKEQAIDQ YREITSNDQD CQDVIEEYLS SPSGSYPPSS SSGSESADFN SDLLFDNPDS WDRYDQFYF
101: RDDSPDPIYY DGYLWRKYGQ KSIKKSNHQR SYYRCSYNKD HNCEARKHEQ KIKDNPPVYR TTYFGHHTCK TEHNLDAIFI AGQDPLDDFK STQMIRFGKD
201: QDQEKESRSN GFSLSVKHEE DIIKEQAIDQ YREITSNDQD CQDVIEEYLS SPSGSYPPSS SSGSESADFN SDLLFDNPDS WDRYDQFYF
Arabidopsis Description
WRKY38Probable WRKY transcription factor 38 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWF1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.