Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER87882 | Sorghum | nucleus | 72.73 | 76.19 |
| Zm00001d036244_P001 | Maize | nucleus | 65.66 | 71.04 |
| Os06t0158100-00 | Rice | nucleus | 51.26 | 51.92 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 46.72 | 50.27 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 46.97 | 50.13 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 46.21 | 48.54 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 27.02 | 33.13 |
| AT4G23810.1 | Thale cress | nucleus | 26.77 | 32.72 |
| CDY03518 | Canola | nucleus | 25.76 | 32.38 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 25.25 | 32.26 |
| CDX94221 | Canola | nucleus | 26.01 | 32.09 |
| Bra013732.1-P | Field mustard | nucleus | 25.25 | 31.65 |
| Bra019265.1-P | Field mustard | nucleus | 25.76 | 31.58 |
| CDY47621 | Canola | nucleus | 25.0 | 31.33 |
| CDY10969 | Canola | nucleus | 25.51 | 31.27 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.98 | 30.85 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 26.52 | 30.7 |
| AT4G11070.1 | Thale cress | nucleus | 23.99 | 30.35 |
| PGSC0003DMT400031695 | Potato | nucleus | 25.76 | 30.09 |
| Solyc08g082110.2.1 | Tomato | nucleus | 25.76 | 30.09 |
| PGSC0003DMT400014949 | Potato | nucleus | 27.02 | 29.72 |
| KRH64503 | Soybean | nucleus | 27.27 | 29.67 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 27.02 | 29.4 |
| Solyc08g008280.2.1 | Tomato | nucleus | 26.26 | 28.89 |
| KRH53440 | Soybean | nucleus | 26.52 | 28.85 |
| CDY65042 | Canola | nucleus | 23.99 | 28.79 |
| Zm00001d050247_P001 | Maize | nucleus | 23.23 | 28.75 |
| Zm00001d011496_P002 | Maize | nucleus | 23.74 | 28.75 |
| KRH77637 | Soybean | nucleus | 23.23 | 28.57 |
| Zm00001d020136_P001 | Maize | nucleus | 21.72 | 28.48 |
| KRH68901 | Soybean | nucleus | 25.76 | 28.18 |
| Zm00001d032265_P001 | Maize | nucleus | 23.48 | 27.93 |
| KRH60029 | Soybean | nucleus | 25.51 | 27.82 |
| CDY25271 | Canola | nucleus | 23.23 | 27.79 |
| Bra033158.1-P | Field mustard | nucleus | 23.23 | 27.79 |
| KRG97154 | Soybean | nucleus | 25.25 | 27.62 |
| KRH41300 | Soybean | nucleus | 25.0 | 27.58 |
| CDX88077 | Canola | nucleus | 21.72 | 27.48 |
| Bra009734.1-P | Field mustard | nucleus | 21.72 | 27.48 |
| AT5G24110.1 | Thale cress | nucleus | 20.96 | 27.39 |
| KRH06499 | Soybean | nucleus | 25.76 | 27.35 |
| CDX87141 | Canola | nucleus | 21.46 | 27.24 |
| CDX80414 | Canola | nucleus | 21.46 | 27.16 |
| KRH47935 | Soybean | nucleus | 25.25 | 27.1 |
| Bra026467.1-P | Field mustard | nucleus | 21.21 | 26.92 |
| Zm00001d044010_P001 | Maize | nucleus | 22.73 | 26.87 |
| CDY19847 | Canola | nucleus | 20.96 | 26.6 |
| Solyc10g009550.2.1 | Tomato | nucleus | 19.44 | 26.55 |
| Zm00001d020137_P001 | Maize | nucleus | 21.72 | 26.54 |
| Bra014426.1-P | Field mustard | nucleus | 18.43 | 26.35 |
| CDX89127 | Canola | nucleus | 18.43 | 26.35 |
| Zm00001d005622_P001 | Maize | nucleus | 21.97 | 26.28 |
| PGSC0003DMT400051194 | Potato | nucleus | 18.69 | 25.52 |
| Bra000423.1-P | Field mustard | nucleus | 17.93 | 25.27 |
| CDX83367 | Canola | nucleus | 17.68 | 25.18 |
| Solyc03g007380.1.1 | Tomato | nucleus | 22.22 | 24.93 |
| AT2G46400.1 | Thale cress | nucleus | 18.43 | 24.75 |
| PGSC0003DMT400023502 | Potato | nucleus | 22.22 | 24.72 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 21.46 | 24.36 |
| CDX95699 | Canola | nucleus | 17.42 | 24.21 |
| Zm00001d043066_P001 | Maize | nucleus | 14.65 | 24.17 |
| Bra004540.1-P | Field mustard | nucleus | 17.17 | 23.86 |
| PGSC0003DMT400000599 | Potato | nucleus | 20.71 | 23.7 |
| Solyc05g050300.1.1 | Tomato | nucleus | 11.62 | 23.59 |
| Solyc01g095630.2.1 | Tomato | nucleus | 19.95 | 23.51 |
| Zm00001d028962_P001 | Maize | nucleus | 12.63 | 23.36 |
| CDX80015 | Canola | nucleus | 17.42 | 23.31 |
| Zm00001d009619_P002 | Maize | nucleus | 17.42 | 23.23 |
| CDY42043 | Canola | nucleus | 17.17 | 23.21 |
| Zm00001d043060_P001 | Maize | nucleus | 15.91 | 22.03 |
| PGSC0003DMT400046351 | Potato | nucleus | 16.67 | 21.93 |
| Zm00001d010617_P001 | Maize | nucleus | 17.42 | 21.77 |
| Solyc05g050330.2.1 | Tomato | nucleus | 13.13 | 21.31 |
| Zm00001d012505_P001 | Maize | nucleus | 13.89 | 20.83 |
| Zm00001d052357_P001 | Maize | nucleus | 11.87 | 20.61 |
| Zm00001d021581_P001 | Maize | cytosol, mitochondrion, nucleus | 6.06 | 20.51 |
| Zm00001d043063_P001 | Maize | nucleus | 13.38 | 20.15 |
| Zm00001d022437_P001 | Maize | mitochondrion, nucleus | 17.17 | 20.12 |
| PGSC0003DMT400084227 | Potato | nucleus | 14.39 | 19.39 |
| PGSC0003DMT400084214 | Potato | nucleus | 15.66 | 18.73 |
| Zm00001d043062_P001 | Maize | nucleus | 15.66 | 18.62 |
| Zm00001d012508_P001 | Maize | mitochondrion | 11.11 | 18.57 |
| Zm00001d010616_P001 | Maize | nucleus, plastid | 10.61 | 18.42 |
| Zm00001d037854_P001 | Maize | extracellular | 18.43 | 17.85 |
| Solyc05g050340.2.1 | Tomato | nucleus | 14.39 | 17.43 |
| Zm00001d005057_P001 | Maize | nucleus | 15.4 | 17.43 |
| Zm00001d052355_P001 | Maize | nucleus | 15.91 | 16.84 |
| Zm00001d047523_P001 | Maize | nucleus | 13.64 | 16.62 |
| Zm00001d023615_P001 | Maize | plastid | 15.4 | 16.01 |
| Zm00001d023616_P001 | Maize | plastid | 15.4 | 16.01 |
| Zm00001d012507_P001 | Maize | nucleus | 14.14 | 15.91 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 2.27 | 15.25 |
| CDX80415 | Canola | nucleus | 5.05 | 13.51 |
Protein Annotations
| EntrezGene:103639781 | MapMan:15.5.22 | Gene3D:2.20.25.80 | ProteinID:AQL01971.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:K7VAJ9 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF24 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000221E3C1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | EnsemblPlantsGene:Zm00001d045283 | EnsemblPlants:Zm00001d045283_P001 | EnsemblPlants:Zm00001d045283_T001 |
| SEG:seg | : | : | : | : | : |
Description
WRKY-transcription factor 118Putative WRKY DNA-binding domain superfamily protein
Coordinates
chr9:+:17935946..17939379
Molecular Weight (calculated)
42368.1 Da
IEP (calculated)
6.059
GRAVY (calculated)
-0.593
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDGAGAEEG GIQTLLALLA DGEEQARQLG EMVAAEDDGP WSSSRRAAAE HYRGAARRLQ RTLGRAAAVA RAFEAAAPGS SRGTDRSDDS PRSADESSGR
101: TVAVDAQAQE RQSTMCKRRK GLPRWTAKFR VPETSLEATP DDGFSWRKYG QKDILGAKFP RGYYRCTYRA AQACAATKQV QRSDADLCVF DVTYQGEHTC
201: HQKPRRATAA LSAPGGRSQT PPPPPTPPAL PLEQQDPGMR LLGMGFRRVL RVETAGLALH DDPDDRGPAS APAAPFSFPS VPPPLLHAGE AATTTDSIPV
301: AAAFSPPASS YGFSAPSYDC APATCYGDVY DYDYEAPQGA RMRGAESSEL GEVVSRAMVA APASFDYSSS LFHHQAELDP HLPFPPFGGP PHDPYQ
101: TVAVDAQAQE RQSTMCKRRK GLPRWTAKFR VPETSLEATP DDGFSWRKYG QKDILGAKFP RGYYRCTYRA AQACAATKQV QRSDADLCVF DVTYQGEHTC
201: HQKPRRATAA LSAPGGRSQT PPPPPTPPAL PLEQQDPGMR LLGMGFRRVL RVETAGLALH DDPDDRGPAS APAAPFSFPS VPPPLLHAGE AATTTDSIPV
301: AAAFSPPASS YGFSAPSYDC APATCYGDVY DYDYEAPQGA RMRGAESSEL GEVVSRAMVA APASFDYSSS LFHHQAELDP HLPFPPFGGP PHDPYQ
001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
Arabidopsis Description
WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.