Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 57.74 | 60.68 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 38.06 | 47.39 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 47.1 | 43.98 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 41.29 | 39.63 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 44.52 | 38.33 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 41.94 | 38.24 |
| KRH64503 | Soybean | nucleus | 42.26 | 35.99 |
| KRH53440 | Soybean | nucleus | 42.26 | 35.99 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 40.65 | 34.62 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 38.06 | 34.5 |
| KRH68901 | Soybean | nucleus | 40.0 | 34.25 |
| KRG97154 | Soybean | nucleus | 39.68 | 33.98 |
| KRH41300 | Soybean | nucleus | 38.39 | 33.15 |
| AT4G11070.1 | Thale cress | nucleus | 33.23 | 32.91 |
| KRH77637 | Soybean | nucleus | 33.87 | 32.61 |
| KRH60029 | Soybean | nucleus | 37.74 | 32.23 |
| CDY03518 | Canola | nucleus | 32.58 | 32.06 |
| CDY10969 | Canola | nucleus | 33.23 | 31.89 |
| CDX94221 | Canola | nucleus | 32.9 | 31.78 |
| KRH47935 | Soybean | nucleus | 37.74 | 31.71 |
| Bra013732.1-P | Field mustard | nucleus | 32.26 | 31.65 |
| CDY47621 | Canola | nucleus | 32.26 | 31.65 |
| Bra019265.1-P | Field mustard | nucleus | 32.9 | 31.58 |
| CDY42043 | Canola | nucleus | 29.68 | 31.4 |
| KRH06499 | Soybean | nucleus | 37.74 | 31.37 |
| Bra000423.1-P | Field mustard | nucleus | 28.39 | 31.32 |
| CDX83367 | Canola | nucleus | 27.74 | 30.94 |
| CDY65042 | Canola | nucleus | 32.9 | 30.91 |
| AT4G23810.1 | Thale cress | nucleus | 32.26 | 30.86 |
| PGSC0003DMT400014949 | Potato | nucleus | 35.81 | 30.83 |
| CDX80015 | Canola | nucleus | 29.35 | 30.74 |
| Solyc10g009550.2.1 | Tomato | nucleus | 28.71 | 30.69 |
| PGSC0003DMT400031695 | Potato | nucleus | 33.55 | 30.68 |
| CDX95699 | Canola | nucleus | 28.06 | 30.53 |
| Bra004540.1-P | Field mustard | nucleus | 28.06 | 30.53 |
| Solyc08g082110.2.1 | Tomato | nucleus | 33.23 | 30.38 |
| PGSC0003DMT400000599 | Potato | nucleus | 33.87 | 30.35 |
| Bra033158.1-P | Field mustard | nucleus | 32.26 | 30.21 |
| CDY25271 | Canola | nucleus | 32.26 | 30.21 |
| PGSC0003DMT400051194 | Potato | nucleus | 28.06 | 30.0 |
| Solyc08g008280.2.1 | Tomato | nucleus | 34.84 | 30.0 |
| Solyc01g095630.2.1 | Tomato | nucleus | 32.26 | 29.76 |
| AT2G46400.1 | Thale cress | nucleus | 28.06 | 29.49 |
| CDX89127 | Canola | nucleus | 25.81 | 28.88 |
| Bra014426.1-P | Field mustard | nucleus | 25.81 | 28.88 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 31.94 | 28.37 |
| Bra026467.1-P | Field mustard | nucleus | 28.39 | 28.21 |
| CDX87141 | Canola | nucleus | 28.39 | 28.21 |
| AT5G24110.1 | Thale cress | nucleus | 27.1 | 27.72 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 27.42 | 27.42 |
| CDY19847 | Canola | nucleus | 27.42 | 27.24 |
| CDX80414 | Canola | nucleus | 27.42 | 27.16 |
| Solyc03g007380.1.1 | Tomato | nucleus | 30.65 | 26.91 |
| CDX88077 | Canola | nucleus | 26.77 | 26.52 |
| Bra009734.1-P | Field mustard | nucleus | 26.77 | 26.52 |
| PGSC0003DMT400023502 | Potato | nucleus | 30.32 | 26.4 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 31.29 | 26.36 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 31.29 | 26.15 |
| Os06t0158100-00 | Rice | nucleus | 32.58 | 25.83 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 31.29 | 25.73 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 4.84 | 25.42 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 14.84 | 25.27 |
| Zm00001d045283_P001 | Maize | nucleus | 32.26 | 25.25 |
| Solyc05g050300.1.1 | Tomato | nucleus | 15.81 | 25.13 |
| EER87882 | Sorghum | nucleus | 30.32 | 24.87 |
| Zm00001d036244_P001 | Maize | nucleus | 29.35 | 24.86 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 26.77 | 24.78 |
| Solyc05g050330.2.1 | Tomato | nucleus | 19.35 | 24.59 |
| GSMUA_Achr8P25110_001 | Banana | nucleus | 16.45 | 22.97 |
| PGSC0003DMT400084214 | Potato | nucleus | 24.19 | 22.66 |
| PGSC0003DMT400046351 | Potato | nucleus | 21.94 | 22.59 |
| GSMUA_Achr7P22020_001 | Banana | extracellular, nucleus | 16.45 | 22.47 |
| PGSC0003DMT400084227 | Potato | nucleus | 21.29 | 22.45 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 23.23 | 22.09 |
| Solyc05g050340.2.1 | Tomato | nucleus | 23.23 | 22.02 |
| GSMUA_Achr5P08580_001 | Banana | nucleus | 21.29 | 21.57 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 20.97 | 21.17 |
| GSMUA_Achr6P25120_001 | Banana | nucleus | 14.52 | 20.27 |
| CDX80415 | Canola | nucleus | 7.1 | 14.86 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr1G27980_001 | EnsemblPlants:GSMUA_Achr1P27980_001 | EnsemblPlants:GSMUA_Achr1T27980_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0S3Q5 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF20 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000295E8F6 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
Putative Probable WRKY transcription factor 41 [Source:GMGC_GENE;Acc:GSMUA_Achr1G27980_001]
Coordinates
chr1:-:26739743..26741092
Molecular Weight (calculated)
34517.2 Da
IEP (calculated)
5.630
GRAVY (calculated)
-0.619
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSTGSELE SPLVAELARA LELARQLESH LSNPAPIDLC KSVAPEILSS IQRSILMAKS SDPDGEQQAA GDSPRSESSS PAFKDHDRKE LIKKRKTLHK
101: WTNQVRLTPG TGGVEGSVDD GYSWRKYGQK DILGAKHPRA YYRCTHRHTQ GCSATKQVQR SDEDPLTFDI TYVGAHTCLQ KPQRASASAC QVPQRREHQK
201: EDLLLSFRAG LKVKTEVAEL EEAQRQTCRQ GNEFHVFSAP ALNLSPVASE SIYFSSFDDG INLQTSDSEI TEMISRSNSA SYLSLVDMDF MLEELDFERD
301: FQFDASSFFS
101: WTNQVRLTPG TGGVEGSVDD GYSWRKYGQK DILGAKHPRA YYRCTHRHTQ GCSATKQVQR SDEDPLTFDI TYVGAHTCLQ KPQRASASAC QVPQRREHQK
201: EDLLLSFRAG LKVKTEVAEL EEAQRQTCRQ GNEFHVFSAP ALNLSPVASE SIYFSSFDDG INLQTSDSEI TEMISRSNSA SYLSLVDMDF MLEELDFERD
301: FQFDASSFFS
001: MEMMNWERRS LLNELIHGLK AAKQLQGSSS PSLSASSSYL TTEIKENLLH NIVSSFKKAI LMLNGSTTQH NPTIELAPDP LAHPGKVPGS PASITGNPRS
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI
Arabidopsis Description
WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.