Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P32460_001 | Banana | nucleus | 64.84 | 36.2 |
| CDY06968 | Canola | nucleus | 30.22 | 35.48 |
| CDY13358 | Canola | nucleus | 26.37 | 30.77 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 36.26 | 29.86 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 37.36 | 27.98 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 41.76 | 24.76 |
| CDY71829 | Canola | nucleus | 29.12 | 21.03 |
| PGSC0003DMT400022638 | Potato | nucleus | 37.91 | 19.88 |
| GSMUA_Achr8P25110_001 | Banana | nucleus | 24.18 | 19.82 |
| CDX75991 | Canola | nucleus | 28.57 | 19.7 |
| CDY59625 | Canola | nucleus | 28.57 | 19.7 |
| Bra014693.1-P | Field mustard | nucleus | 28.57 | 19.7 |
| Bra016975.1-P | Field mustard | nucleus | 29.67 | 19.01 |
| KRH64215 | Soybean | nucleus | 35.16 | 18.99 |
| KRH53718 | Soybean | nucleus | 33.52 | 18.43 |
| CDY22473 | Canola | nucleus | 30.22 | 18.33 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 24.73 | 18.07 |
| OQU77713 | Sorghum | nucleus | 37.36 | 17.99 |
| CDY35442 | Canola | nucleus | 29.67 | 17.94 |
| Bra000202.1-P | Field mustard | nucleus | 29.12 | 17.67 |
| AT2G40740.3 | Thale cress | nucleus | 29.12 | 17.61 |
| TraesCS1B01G243100.1 | Wheat | nucleus | 34.07 | 17.27 |
| GSMUA_Achr7P22020_001 | Banana | extracellular, nucleus | 21.43 | 17.18 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 36.81 | 17.14 |
| TraesCS6B01G108000.1 | Wheat | nucleus | 36.81 | 17.09 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 35.71 | 16.67 |
| Zm00001d037854_P001 | Maize | extracellular | 37.36 | 16.63 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 29.67 | 16.27 |
| VIT_13s0067g03130.t01 | Wine grape | nucleus | 32.42 | 16.21 |
| Os05t0321900-01 | Rice | nucleus | 37.36 | 15.89 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.73 | 15.25 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 25.27 | 14.84 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 26.92 | 14.41 |
| GSMUA_Achr6P25120_001 | Banana | nucleus | 17.03 | 13.96 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 27.47 | 13.89 |
| GSMUA_Achr5P08580_001 | Banana | nucleus | 23.08 | 13.73 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 25.82 | 13.47 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 22.53 | 13.23 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 22.53 | 12.24 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr9G04830_001 | EnsemblPlants:GSMUA_Achr9P04830_001 | EnsemblPlants:GSMUA_Achr9T04830_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0TXJ2 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF38 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI00029508F7 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G04830_001]
Coordinates
chr9:-:3155953..3156595
Molecular Weight (calculated)
19636.8 Da
IEP (calculated)
7.216
GRAVY (calculated)
-0.632
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIPPNDGYK WRKYGQKKIL NSSFPRSYYH CNHKSYYRCD AKKMVQRSDD DPYTFQVTYC GSHTCHTSPT PKLIPTLVPS GSVNDNDDGG NGNPQGAPLG
101: LEAMHPVASQ STPIHLQNWL EGNPSSTGAL LVAHSGVSSR SSRQVAQVQG GRDIDCSVAD ALLNTASSGS SMDVIVSPTH GE
101: LEAMHPVASQ STPIHLQNWL EGNPSSTGAL LVAHSGVSSR SSRQVAQVQG GRDIDCSVAD ALLNTASSGS SMDVIVSPTH GE
001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
Arabidopsis Description
WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.