Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35442 | Canola | nucleus | 98.0 | 97.67 |
| Bra016975.1-P | Field mustard | nucleus | 75.0 | 79.23 |
| AT2G40740.3 | Thale cress | nucleus | 72.0 | 71.76 |
| Bra014693.1-P | Field mustard | nucleus | 41.33 | 46.97 |
| KRH64215 | Soybean | nucleus | 39.33 | 35.01 |
| KRH53718 | Soybean | nucleus | 37.67 | 34.14 |
| HORVU6Hr1G013890.3 | Barley | nucleus | 25.0 | 33.94 |
| VIT_13s0067g03130.t01 | Wine grape | nucleus | 41.0 | 33.79 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 26.67 | 32.92 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 30.67 | 29.97 |
| PGSC0003DMT400022638 | Potato | nucleus | 34.33 | 29.68 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 17.67 | 29.12 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 28.33 | 26.07 |
| OQU77713 | Sorghum | nucleus | 32.33 | 25.66 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 32.67 | 25.06 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 32.33 | 24.87 |
| TraesCS6B01G108000.1 | Wheat | nucleus | 32.33 | 24.74 |
| TraesCS1B01G243100.1 | Wheat | nucleus | 29.0 | 24.23 |
| Os05t0321900-01 | Rice | nucleus | 33.0 | 23.13 |
| Bra004540.1-P | Field mustard | nucleus | 21.67 | 22.81 |
| Bra000423.1-P | Field mustard | nucleus | 21.33 | 22.78 |
| Zm00001d037854_P001 | Maize | extracellular | 31.0 | 22.74 |
| Bra013732.1-P | Field mustard | nucleus | 23.67 | 22.47 |
| Bra014426.1-P | Field mustard | nucleus | 20.33 | 22.02 |
| Bra007243.1-P | Field mustard | nucleus | 19.67 | 21.38 |
| Bra019265.1-P | Field mustard | nucleus | 22.33 | 20.74 |
| Bra014692.1-P | Field mustard | nucleus | 19.33 | 20.35 |
| Bra026467.1-P | Field mustard | nucleus | 20.33 | 19.55 |
| Bra003239.1-P | Field mustard | nucleus | 18.33 | 19.43 |
| Bra009734.1-P | Field mustard | nucleus | 20.0 | 19.17 |
| Bra033158.1-P | Field mustard | nucleus | 21.0 | 19.03 |
| Bra016974.1-P | Field mustard | nucleus | 19.0 | 17.27 |
| Bra004586.1-P | Field mustard | nucleus | 18.33 | 16.22 |
| Bra000203.1-P | Field mustard | nucleus | 18.0 | 15.88 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EnsemblPlantsGene:Bra000202 | EnsemblPlants:Bra000202.1 | EnsemblPlants:Bra000202.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M4C7M4 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF38 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI00025402E0 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
AT2G40740 (E=4e-106) WRKY55, ATWRKY55 | WRKY55; transcription factor
Coordinates
chrA03:+:9847257..9849212
Molecular Weight (calculated)
33549.4 Da
IEP (calculated)
6.991
GRAVY (calculated)
-0.699
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVMSIIFH GLKLVDELKS SLQEKSPESL STSLDEITKT FDDAKERLKI VLVIRNSETT MNQVKPVISS CSDRMLMQIE PDLMHEYWLR YGGSTSSHGT
101: EAVTQRQLMA VDGDGGRNLT ATERSGGSGS GSSTPRQRRR KNEGEEQTVL VPALRSGNTD LPPDDSHTWR KYGQKEILHS KFPRAYYRCT HQKLYNCPAK
201: KQVQRLNDDP FTFRVNYRGS HTCHIYSTAP TASAAAPTAL ITTTTTTSHP VDYGPFFDMA EAMMLGSGGI GANMDFIFPC NDPPHHHHCY RRSEDGDGDK
101: EAVTQRQLMA VDGDGGRNLT ATERSGGSGS GSSTPRQRRR KNEGEEQTVL VPALRSGNTD LPPDDSHTWR KYGQKEILHS KFPRAYYRCT HQKLYNCPAK
201: KQVQRLNDDP FTFRVNYRGS HTCHIYSTAP TASAAAPTAL ITTTTTTSHP VDYGPFFDMA EAMMLGSGGI GANMDFIFPC NDPPHHHHCY RRSEDGDGDK
001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
Arabidopsis Description
WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.