Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G013890.3 | Barley | nucleus | 32.25 | 44.8 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 24.76 | 41.76 |
| CDY06968 | Canola | nucleus | 20.85 | 41.29 |
| CDY13358 | Canola | nucleus | 20.2 | 39.74 |
| OQU77713 | Sorghum | nucleus | 47.88 | 38.89 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 41.04 | 38.65 |
| TraesCS6B01G108000.1 | Wheat | nucleus | 45.93 | 35.97 |
| TraesCS1B01G243100.1 | Wheat | nucleus | 41.69 | 35.65 |
| TraesCS6A01G080500.1 | Wheat | nucleus | 45.28 | 35.55 |
| TraesCS6D01G074200.1 | Wheat | nucleus | 44.95 | 35.38 |
| Zm00001d037854_P001 | Maize | extracellular | 45.93 | 34.47 |
| Os05t0321900-01 | Rice | nucleus | 46.25 | 33.18 |
| Bra016975.1-P | Field mustard | nucleus | 29.64 | 32.04 |
| AT2G40740.3 | Thale cress | nucleus | 31.27 | 31.89 |
| Solyc06g048870.1.1 | Tomato | nucleus, vacuole | 25.08 | 31.69 |
| CDY22473 | Canola | nucleus | 30.29 | 31.0 |
| CDY71829 | Canola | nucleus | 25.41 | 30.95 |
| CDY59625 | Canola | nucleus | 26.38 | 30.68 |
| CDX75991 | Canola | nucleus | 26.38 | 30.68 |
| Bra014693.1-P | Field mustard | nucleus | 26.38 | 30.68 |
| Bra000202.1-P | Field mustard | nucleus | 29.97 | 30.67 |
| KRH64215 | Soybean | nucleus | 33.22 | 30.27 |
| CDY35442 | Canola | nucleus | 29.64 | 30.23 |
| KRH53718 | Soybean | nucleus | 31.27 | 29.0 |
| PGSC0003DMT400022638 | Potato | nucleus | 32.57 | 28.82 |
| VIT_13s0067g03130.t01 | Wine grape | nucleus | 32.57 | 27.47 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 21.17 | 26.1 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 24.43 | 22.59 |
| GSMUA_Achr8P25110_001 | Banana | nucleus | 15.96 | 22.07 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.2 | 21.02 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 21.17 | 20.97 |
| GSMUA_Achr7P22020_001 | Banana | extracellular, nucleus | 15.31 | 20.7 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 20.85 | 20.65 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 24.1 | 20.56 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 22.15 | 20.0 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 22.15 | 19.48 |
| GSMUA_Achr5P08580_001 | Banana | nucleus | 16.61 | 16.67 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 17.26 | 15.82 |
| GSMUA_Achr6P25120_001 | Banana | nucleus | 10.42 | 14.41 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr8G01730_001 | EnsemblPlants:GSMUA_Achr8P01730_001 | EnsemblPlants:GSMUA_Achr8T01730_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0TLS5 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF38 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000296BB15 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
Putative WRKY transcription factor 55 [Source:GMGC_GENE;Acc:GSMUA_Achr8G01730_001]
Coordinates
chr8:+:1333728..1334808
Molecular Weight (calculated)
33530.1 Da
IEP (calculated)
5.831
GRAVY (calculated)
-0.553
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEVLSQVFG ACRLAGELES SLRLSNAAAD AHFLLSSCEH IVDAFNKAID GVRMLTGEGR MRPFELPPIP AAEDDEHPFF EMADFSESPQ LSLEVQPSAA
101: AHSEAFAGGG EAQVAVGGAS SRGRSSRKRK EGYVTKKVPV LRTGNMEVPP DDGYTWRKYG QKDILNSRFP RSYYRCTHKN YYGCEAKKQV QRLDADPYTL
201: EVTYCGSHTC KTSPTPIMIP SLAHSPIGKD EKDDRTCHGH PQAAPTTTLS TSIQLGNWFE GSSRQEGQTQ GGRDVDYCPV AEFADAMFSS GSSGSIMDAI
301: YLPRQGN
101: AHSEAFAGGG EAQVAVGGAS SRGRSSRKRK EGYVTKKVPV LRTGNMEVPP DDGYTWRKYG QKDILNSRFP RSYYRCTHKN YYGCEAKKQV QRLDADPYTL
201: EVTYCGSHTC KTSPTPIMIP SLAHSPIGKD EKDDRTCHGH PQAAPTTTLS TSIQLGNWFE GSSRQEGQTQ GGRDVDYCPV AEFADAMFSS GSSGSIMDAI
301: YLPRQGN
001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS
Arabidopsis Description
WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.