Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P15840_001 | Banana | nucleus | 49.1 | 65.46 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 43.98 | 47.1 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 39.76 | 40.87 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 44.28 | 40.83 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.14 | 40.68 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 34.04 | 38.57 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 33.73 | 38.23 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 27.41 | 37.3 |
| KRG97154 | Soybean | nucleus | 40.36 | 37.02 |
| KRH68901 | Soybean | nucleus | 40.36 | 37.02 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 32.83 | 36.82 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 37.65 | 36.76 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 26.2 | 36.55 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 37.65 | 36.55 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 26.51 | 36.51 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 36.45 | 36.45 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 27.11 | 36.44 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 26.81 | 36.03 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 36.75 | 35.99 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 26.2 | 35.95 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 36.75 | 35.78 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 31.33 | 35.74 |
| KRH64503 | Soybean | nucleus | 39.16 | 35.71 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 39.16 | 35.71 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 26.51 | 35.63 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 26.2 | 35.51 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 25.9 | 34.96 |
| CDY03518 | Canola | nucleus | 33.13 | 34.92 |
| Os08t0386200-01 | Rice | nucleus | 33.43 | 34.8 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 35.84 | 34.69 |
| Os05t0571200-01 | Rice | nucleus | 28.92 | 34.66 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 26.51 | 34.65 |
| Bra013732.1-P | Field mustard | nucleus | 32.83 | 34.49 |
| CDY47621 | Canola | nucleus | 32.83 | 34.49 |
| KRH53440 | Soybean | nucleus | 37.65 | 34.34 |
| EER96589 | Sorghum | nucleus | 31.93 | 34.19 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 25.6 | 34.14 |
| Zm00001d020136_P001 | Maize | nucleus | 31.02 | 34.11 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 35.54 | 34.1 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 25.9 | 33.99 |
| Os01t0656400-00 | Rice | nucleus | 28.01 | 33.94 |
| PGSC0003DMT400031695 | Potato | nucleus | 34.64 | 33.92 |
| EES18716 | Sorghum | nucleus | 27.71 | 33.82 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 31.33 | 33.77 |
| CDX94221 | Canola | nucleus | 32.53 | 33.64 |
| CDY65042 | Canola | nucleus | 33.43 | 33.64 |
| Solyc08g082110.2.1 | Tomato | nucleus | 34.34 | 33.63 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 25.6 | 33.6 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 23.49 | 33.48 |
| Bra019265.1-P | Field mustard | nucleus | 32.53 | 33.44 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 25.6 | 33.33 |
| Zm00001d032265_P001 | Maize | nucleus | 33.43 | 33.33 |
| KRH06499 | Soybean | nucleus | 37.35 | 33.24 |
| OQU80381 | Sorghum | nucleus | 34.04 | 33.24 |
| Bra033158.1-P | Field mustard | nucleus | 33.13 | 33.23 |
| CDY25271 | Canola | nucleus | 33.13 | 33.23 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 24.4 | 33.2 |
| CDY10969 | Canola | nucleus | 32.23 | 33.13 |
| PGSC0003DMT400014949 | Potato | nucleus | 35.84 | 33.06 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 34.94 | 33.05 |
| Os09t0334500-01 | Rice | nucleus | 35.84 | 32.96 |
| AT4G11070.1 | Thale cress | nucleus | 31.02 | 32.91 |
| CDY42043 | Canola | nucleus | 28.92 | 32.76 |
| Bra000423.1-P | Field mustard | nucleus | 27.71 | 32.74 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 34.34 | 32.66 |
| KRH41300 | Soybean | nucleus | 35.24 | 32.59 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 25.6 | 32.57 |
| Zm00001d050247_P001 | Maize | nucleus | 31.33 | 32.5 |
| CDX83367 | Canola | nucleus | 27.11 | 32.37 |
| KRH77637 | Soybean | nucleus | 31.33 | 32.3 |
| Os11t0685700-00 | Rice | nucleus | 18.67 | 32.29 |
| Bra004540.1-P | Field mustard | nucleus | 27.71 | 32.28 |
| CDX95699 | Canola | nucleus | 27.71 | 32.28 |
| KRH47935 | Soybean | nucleus | 35.84 | 32.25 |
| Solyc08g008280.2.1 | Tomato | nucleus | 34.94 | 32.22 |
| AT4G23810.1 | Thale cress | nucleus | 31.33 | 32.1 |
| Zm00001d020137_P001 | Maize | nucleus | 31.33 | 32.1 |
| CDX80015 | Canola | nucleus | 28.61 | 32.09 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 33.73 | 32.09 |
| KRH60029 | Soybean | nucleus | 34.94 | 31.96 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 25.0 | 31.92 |
| Zm00001d011496_P002 | Maize | nucleus | 31.33 | 31.8 |
| EES03370 | Sorghum | nucleus | 33.13 | 31.79 |
| EER96590 | Sorghum | nucleus | 31.33 | 31.71 |
| Zm00001d005622_P001 | Maize | nucleus | 31.33 | 31.42 |
| Bra014426.1-P | Field mustard | nucleus | 26.2 | 31.41 |
| CDX89127 | Canola | nucleus | 26.2 | 31.41 |
| Solyc10g009550.2.1 | Tomato | nucleus | 27.11 | 31.03 |
| AT2G46400.1 | Thale cress | nucleus | 27.41 | 30.85 |
| Bra026467.1-P | Field mustard | nucleus | 28.92 | 30.77 |
| Solyc03g007380.1.1 | Tomato | nucleus | 32.23 | 30.31 |
| CDX87141 | Canola | nucleus | 28.31 | 30.13 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 29.22 | 30.03 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 28.01 | 30.0 |
| CDY19847 | Canola | nucleus | 28.01 | 29.81 |
| AT5G24110.1 | Thale cress | nucleus | 27.11 | 29.7 |
| GSMUA_Achr9P04830_001 | Banana | nucleus | 16.27 | 29.67 |
| PGSC0003DMT400051194 | Potato | nucleus | 25.9 | 29.66 |
| Zm00001d044010_P001 | Maize | nucleus | 29.82 | 29.55 |
| Zm00001d009619_P002 | Maize | nucleus | 26.2 | 29.29 |
| PGSC0003DMT400023502 | Potato | nucleus | 31.02 | 28.93 |
| PGSC0003DMT400000599 | Potato | nucleus | 30.12 | 28.9 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 34.04 | 28.83 |
| Solyc01g095630.2.1 | Tomato | nucleus | 28.61 | 28.27 |
| CDX80414 | Canola | nucleus | 26.51 | 28.11 |
| Bra009734.1-P | Field mustard | nucleus | 26.2 | 27.8 |
| CDX88077 | Canola | nucleus | 26.2 | 27.8 |
| Solyc05g050300.1.1 | Tomato | nucleus | 16.27 | 27.69 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 27.41 | 27.41 |
| PGSC0003DMT400084227 | Potato | nucleus | 22.29 | 25.17 |
| GSMUA_Achr5P07490_001 | Banana | endoplasmic reticulum | 25.3 | 25.07 |
| GSMUA_Achr6P32460_001 | Banana | nucleus | 24.4 | 24.85 |
| GSMUA_Achr8P01730_001 | Banana | nucleus | 22.59 | 24.43 |
| PGSC0003DMT400046351 | Potato | nucleus | 21.99 | 24.25 |
| Solyc05g050330.2.1 | Tomato | nucleus | 17.77 | 24.18 |
| GSMUA_Achr5P08580_001 | Banana | nucleus | 21.69 | 23.53 |
| GSMUA_Achr8P25110_001 | Banana | nucleus | 15.66 | 23.42 |
| GSMUA_Achr7P22020_001 | Banana | extracellular, nucleus | 15.96 | 23.35 |
| PGSC0003DMT400084214 | Potato | nucleus | 21.99 | 22.05 |
| Solyc05g050340.2.1 | Tomato | nucleus | 21.08 | 21.41 |
| GSMUA_Achr6P25120_001 | Banana | nucleus | 14.16 | 21.17 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 3.31 | 18.64 |
| CDX80415 | Canola | nucleus | 7.83 | 17.57 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr3G25080_001 | EnsemblPlants:GSMUA_Achr3P25080_001 | EnsemblPlants:GSMUA_Achr3T25080_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0SHM4 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF20 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI0002960FF4 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G25080_001]
Coordinates
chr3:-:25392076..25393228
Molecular Weight (calculated)
36536.5 Da
IEP (calculated)
6.680
GRAVY (calculated)
-0.730
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKGKASEQP GLLLAELARV QELAREMEAE HGRHSTDEFR RSLLHELLVS IEKAICMAKS TAPDVNPQPA DGDSPRSSGE SSRSETSKLT FREQMSKKRK
101: KLPRWTREVR VSSGAGGGVH GPVDDGYSWR KYGQKDILGS KHPRGYYRCT HRIMQGCPAT KQVQRSDEDP LLFHVTYHGA HTCLPKSPAA PASASAWLSQ
201: EQQQQEEKEP VDRQQQNQDL LLRFQTGLRV KTEDLELGGH GQNSLSFSFA SPSTTTDSGF ISRASPAFLS PTSDSTYFSF SPYSLKGGGI KLRSPESGIT
301: GANSASDSPA AADMDLMLEE LDFESDFSSF FS
101: KLPRWTREVR VSSGAGGGVH GPVDDGYSWR KYGQKDILGS KHPRGYYRCT HRIMQGCPAT KQVQRSDEDP LLFHVTYHGA HTCLPKSPAA PASASAWLSQ
201: EQQQQEEKEP VDRQQQNQDL LLRFQTGLRV KTEDLELGGH GQNSLSFSFA SPSTTTDSGF ISRASPAFLS PTSDSTYFSF SPYSLKGGGI KLRSPESGIT
301: GANSASDSPA AADMDLMLEE LDFESDFSSF FS
001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
Arabidopsis Description
WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.