Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80414 | Canola | nucleus | 78.55 | 76.04 |
| Bra009734.1-P | Field mustard | nucleus | 78.22 | 75.72 |
| CDX88077 | Canola | nucleus | 77.89 | 75.4 |
| CDX87141 | Canola | nucleus | 75.58 | 73.4 |
| CDY19847 | Canola | nucleus | 74.92 | 72.76 |
| Bra026467.1-P | Field mustard | nucleus | 74.26 | 72.12 |
| CDX80415 | Canola | nucleus | 28.71 | 58.78 |
| AT4G23810.1 | Thale cress | nucleus | 34.32 | 32.1 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 24.42 | 29.72 |
| AT4G11070.1 | Thale cress | nucleus | 30.03 | 29.07 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 21.78 | 27.39 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 29.7 | 27.11 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 27.72 | 27.1 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 25.74 | 26.8 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 21.78 | 26.72 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 21.78 | 26.72 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 21.45 | 26.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.74 | 26.44 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 21.45 | 26.42 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 31.35 | 26.39 |
| Zm00001d020136_P001 | Maize | nucleus | 26.07 | 26.16 |
| AT2G46400.1 | Thale cress | nucleus | 25.41 | 26.1 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 25.08 | 25.94 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 28.38 | 25.9 |
| EER96589 | Sorghum | nucleus | 26.4 | 25.81 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 21.45 | 25.69 |
| Zm00001d050247_P001 | Maize | nucleus | 27.06 | 25.62 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 24.75 | 25.6 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 28.71 | 25.51 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 4.95 | 25.42 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 28.38 | 25.37 |
| EER96590 | Sorghum | nucleus | 27.39 | 25.3 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 21.12 | 25.2 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 25.41 | 25.0 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 24.42 | 25.0 |
| Os11t0685700-00 | Rice | nucleus | 15.84 | 25.0 |
| Os05t0571200-01 | Rice | nucleus | 22.77 | 24.91 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 19.8 | 24.79 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 19.47 | 24.79 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 28.05 | 24.78 |
| Zm00001d005622_P001 | Maize | nucleus | 27.06 | 24.77 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 20.79 | 24.71 |
| Zm00001d020137_P001 | Maize | nucleus | 26.4 | 24.69 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 19.8 | 24.59 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 20.46 | 24.51 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 28.38 | 24.5 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 20.13 | 24.5 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 19.8 | 24.49 |
| Os01t0656400-00 | Rice | nucleus | 22.11 | 24.45 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 19.8 | 24.29 |
| EES18716 | Sorghum | nucleus | 21.78 | 24.26 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 27.06 | 24.12 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 27.39 | 23.99 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 20.46 | 23.75 |
| Os08t0386200-01 | Rice | nucleus | 24.75 | 23.51 |
| Zm00001d032265_P001 | Maize | nucleus | 25.74 | 23.42 |
| OQU80381 | Sorghum | nucleus | 26.07 | 23.24 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 19.8 | 23.08 |
| Zm00001d011496_P002 | Maize | nucleus | 24.75 | 22.94 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 26.4 | 22.92 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 17.49 | 22.75 |
| Os09t0334500-01 | Rice | nucleus | 27.06 | 22.71 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 27.39 | 22.55 |
| EES03370 | Sorghum | nucleus | 25.74 | 22.54 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 25.74 | 22.35 |
| Os06t0158100-00 | Rice | nucleus | 28.71 | 22.25 |
| Solyc05g050330.2.1 | Tomato | nucleus | 17.82 | 22.13 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 28.38 | 21.94 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 26.73 | 21.83 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 27.06 | 21.75 |
| EER87882 | Sorghum | nucleus | 27.06 | 21.69 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 21.78 | 21.29 |
| Zm00001d045283_P001 | Maize | nucleus | 27.39 | 20.96 |
| PGSC0003DMT400046351 | Potato | nucleus | 20.79 | 20.93 |
| Zm00001d009619_P002 | Maize | nucleus | 20.46 | 20.88 |
| Zm00001d036244_P001 | Maize | nucleus | 25.08 | 20.77 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 22.11 | 20.74 |
| Zm00001d044010_P001 | Maize | nucleus | 22.44 | 20.3 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 22.11 | 20.18 |
| PGSC0003DMT400084214 | Potato | nucleus | 21.12 | 19.34 |
| AT3G56400.1 | Thale cress | nucleus | 18.48 | 19.05 |
| Solyc05g050340.2.1 | Tomato | nucleus | 20.13 | 18.65 |
| Solyc05g050300.1.1 | Tomato | nucleus | 11.88 | 18.46 |
| PGSC0003DMT400084227 | Potato | nucleus | 17.82 | 18.37 |
| AT2G40740.3 | Thale cress | nucleus | 17.82 | 17.94 |
| AT2G40750.1 | Thale cress | nucleus | 17.16 | 15.03 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:832476 | UniProt:A0A178UIT8 | ProteinID:AED93258.1 | EMBL:AF404858 |
| EMBL:AK117885 | ArrayExpress:AT5G24110 | EnsemblPlantsGene:AT5G24110 | RefSeq:AT5G24110 | TAIR:AT5G24110 | RefSeq:AT5G24110-TAIR-G |
| EnsemblPlants:AT5G24110.1 | TAIR:AT5G24110.1 | EMBL:AY088401 | Unigene:At.9177 | ProteinID:BAB11571.1 | EMBL:BT005295 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009751 | GO:GO:0009987 | GO:GO:0010193 | GO:GO:0042542 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:IPR003657 | InterPro:IPR036576 | RefSeq:NP_568439.1 | ProteinID:OAO93094.1 | PFAM:PF03106 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007616 | PO:PO:0009029 | PO:PO:0009047 | PO:PO:0025034 |
| PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF34 | UniProt:Q9FL62 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000000C5D2 | Symbol:WRKY30 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
WRKY30Probable WRKY transcription factor 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL62]
Coordinates
chr5:-:8153115..8154710
Molecular Weight (calculated)
33987.1 Da
IEP (calculated)
6.574
GRAVY (calculated)
-0.918
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKNHSSGEW EKMKNEINEL MIEGRDYAHQ FGSASSQETR EHLAKKILQS YHKSLTIMNY SGELDQVSQG GGSPKSDDSD QEPLVIKSSK KSMPRWSSKV
101: RIAPGAGVDR TLDDGFSWRK YGQKDILGAK FPRGYYRCTY RKSQGCEATK QVQRSDENQM LLEISYRGIH SCSQAANVGT TMPIQNLEPN QTQEHGNLDM
201: VKESVDNYNH QAHLHHNLHY PLSSTPNLEN NNAYMLQMRD QNIEYFGSTS FSSDLGTSIN YNFPASGSAS HSASNSPSTV PLESPFESYD PNHPYGGFGG
301: FYS
101: RIAPGAGVDR TLDDGFSWRK YGQKDILGAK FPRGYYRCTY RKSQGCEATK QVQRSDENQM LLEISYRGIH SCSQAANVGT TMPIQNLEPN QTQEHGNLDM
201: VKESVDNYNH QAHLHHNLHY PLSSTPNLEN NNAYMLQMRD QNIEYFGSTS FSSDLGTSIN YNFPASGSAS HSASNSPSTV PLESPFESYD PNHPYGGFGG
301: FYS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.