Factsheet for Os08t0386200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0262200-00
Os03t0319300-01
Os03t0703400-01
Os03t0743500-02
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23810.1	Os01t0267900-01	AT2G41090.1	17360592
AT4G23810.1	Os01t0279300-01	AT2G41090.1	17360592
AT4G23810.1	Os01t0810300-01	AT2G41090.1	17360592
AT4G23810.1	Os03t0319300-01	AT2G41090.1	17360592
AT4G23810.1	Os05t0491000-01	AT2G41090.1	17360592
AT4G23810.1	Os05t0491100-01	AT2G41090.1	17360592
AT4G23810.1	Os07t0687200-02	AT2G41090.1	17360592
AT4G23810.1	Os12t0603800-00	AT2G41090.1	17360592
AT4G23810.1	Os01t0267900-01	AT2G41100.1	17360592
AT4G23810.1	Os01t0279300-01	AT2G41100.1	17360592
AT4G23810.1	Os01t0810300-01	AT2G41100.1	17360592
AT4G23810.1	Os03t0319300-01	AT2G41100.1	17360592
AT4G23810.1	Os05t0491000-01	AT2G41100.1	17360592
AT4G23810.1	Os05t0491100-01	AT2G41100.1	17360592
AT4G23810.1	Os07t0687200-02	AT2G41100.1	17360592
AT4G23810.1	Os12t0603800-00	AT2G41100.1	17360592
AT4G23810.1	Os03t0262200-00	AT4G08500.1	17587183
AT4G23810.1	Os03t0703400-01	AT4G08500.1	17587183
AT4G23810.1	Os03t0743500-02	AT4G14640.1	17360592
AT4G23810.1	Os01t0267900-01	AT5G21274.1	17360592
AT4G23810.1	Os01t0279300-01	AT5G21274.1	17360592
AT4G23810.1	Os01t0810300-01	AT5G21274.1	17360592
AT4G23810.1	Os03t0319300-01	AT5G21274.1	17360592
AT4G23810.1	Os05t0491000-01	AT5G21274.1	17360592
AT4G23810.1	Os05t0491100-01	AT5G21274.1	17360592
AT4G23810.1	Os07t0687200-02	AT5G21274.1	17360592
AT4G23810.1	Os12t0603800-00	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G187500.1	Wheat	nucleus	56.43	61.43
TraesCS2D01G168600.1	Wheat	nucleus	56.11	61.09
HORVU2Hr1G029430.2	Barley	mitochondrion, nucleus	46.08	60.25
TraesCS2A01G161500.1	Wheat	nucleus	55.8	60.14
OQU80381	Sorghum	nucleus	56.43	52.94
Zm00001d050247_P001	Maize	nucleus	52.35	52.19
Zm00001d032265_P001	Maize	nucleus	54.23	51.95
GSMUA_Achr3P15840_001	Banana	nucleus	31.35	40.16
Os09t0334500-01	Rice	nucleus	42.32	37.4
Os11t0685700-00	Rice	nucleus	21.32	35.42
VIT_15s0046g01140.t01	Wine grape	nucleus	34.8	34.37
Os05t0571200-01	Rice	nucleus	29.15	33.57
GSMUA_Achr3P25080_001	Banana	nucleus	34.8	33.43
Os01t0656400-00	Rice	nucleus	27.59	32.12
Solyc10g009550.2.1	Tomato	nucleus	28.53	31.38
CDX94221	Canola	nucleus	30.41	30.22
KRH77637	Soybean	nucleus	30.41	30.12
Bra019265.1-P	Field mustard	nucleus	30.41	30.03
AT4G23810.1	Thale cress	nucleus	30.41	29.94
PGSC0003DMT400031695	Potato	nucleus	31.66	29.79
PGSC0003DMT400051194	Potato	nucleus	26.96	29.66
CDY03518	Canola	nucleus	28.84	29.21
CDY10969	Canola	nucleus	29.47	29.1
KRH68901	Soybean	nucleus	32.92	29.01
KRH41300	Soybean	nucleus	32.6	28.97
VIT_02s0025g01280.t01	Wine grape	nucleus	31.03	28.95
Solyc08g082110.2.1	Tomato	nucleus	30.72	28.91
CDY47621	Canola	nucleus	28.53	28.8
Bra013732.1-P	Field mustard	nucleus	28.53	28.8
CDY65042	Canola	nucleus	29.78	28.79
PGSC0003DMT400014949	Potato	nucleus	32.29	28.61
Bra000423.1-P	Field mustard	nucleus	25.08	28.47
Solyc08g008280.2.1	Tomato	nucleus	31.97	28.33
VIT_16s0050g02510.t01	Wine grape	nucleus	32.29	28.3
KRG97154	Soybean	nucleus	31.97	28.18
AT4G11070.1	Thale cress	nucleus	27.59	28.11
KRH60029	Soybean	nucleus	31.97	28.1
CDX83367	Canola	nucleus	24.45	28.06
AT2G46400.1	Thale cress	nucleus	25.71	27.8
Bra033158.1-P	Field mustard	nucleus	28.84	27.79
CDY25271	Canola	nucleus	28.84	27.79
CDX95699	Canola	nucleus	24.45	27.37
PGSC0003DMT400000599	Potato	nucleus	29.47	27.17
Solyc05g050310.1.1	Tomato	cytosol, nucleus	5.02	27.12
KRH64503	Soybean	nucleus	30.72	26.92
KRH53440	Soybean	nucleus	30.72	26.92
Solyc01g095630.2.1	Tomato	nucleus	28.21	26.79
CDX89127	Canola	nucleus	23.2	26.71
Bra014426.1-P	Field mustard	nucleus	23.2	26.71
Bra004540.1-P	Field mustard	nucleus	23.82	26.67
KRH47935	Soybean	nucleus	30.41	26.29
CDX80015	Canola	nucleus	24.14	26.01
KRH06499	Soybean	nucleus	30.41	26.01
CDY42043	Canola	nucleus	23.51	25.6
CDX87141	Canola	nucleus	24.76	25.32
Os06t0158100-00	Rice	nucleus	31.03	25.32
Solyc03g007380.1.1	Tomato	nucleus	27.9	25.21
Bra026467.1-P	Field mustard	nucleus	24.45	25.0
CDX80414	Canola	nucleus	24.45	24.92
AT5G24110.1	Thale cress	nucleus	23.51	24.75
CDY19847	Canola	nucleus	24.14	24.68
Os01t0821600-01	Rice	nucleus	21.63	24.64
Bra009734.1-P	Field mustard	nucleus	24.14	24.6
CDX88077	Canola	nucleus	24.14	24.6
Solyc05g050330.2.1	Tomato	nucleus	18.81	24.59
PGSC0003DMT400023502	Potato	nucleus	27.27	24.44
Solyc05g050300.1.1	Tomato	nucleus	14.42	23.59
Os05t0478800-00	Rice	nucleus	15.99	22.87
PGSC0003DMT400046351	Potato	nucleus	21.0	22.26
PGSC0003DMT400084227	Potato	nucleus	20.38	22.11
PGSC0003DMT400084214	Potato	nucleus	22.57	21.75
Os05t0322900-01	Rice	nucleus	21.32	20.86
Os12t0116400-00	Rice	nucleus	14.42	20.72
Os11t0116900-01	Rice	nucleus	14.42	20.54
Os01t0820400-01	Rice	nucleus	16.61	20.0
Solyc05g050340.2.1	Tomato	nucleus	20.38	19.88
Os03t0321700-01	Rice	nucleus	12.85	19.52
Os07t0680400-01	Rice	nucleus	20.38	19.52
Os01t0820700-00	Rice	nucleus	16.61	18.73
Os05t0478400-00	Rice	nucleus	20.69	18.44
Os03t0335200-01	Rice	nucleus	16.3	16.51
Os05t0321900-01	Rice	nucleus	21.94	16.36
Os01t0821300-01	Rice	cytosol, nucleus	9.4	15.87
CDX80415	Canola	nucleus	7.21	15.54
Os05t0478700-00	Rice	nucleus	13.17	15.0
Os11t0116600-00	Rice	nucleus	3.45	6.21

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:4345456	EMBL:AK111606	ProteinID:BAD05421.1	ProteinID:BAF23621.1
ProteinID:BAT05255.1	ProteinID:EAZ42593.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EMBL:HQ858835	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlantsGene:Os08g0386200	EnsemblPlants:Os08t0386200-01
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF26	UniProt:Q6ZA22	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000022F22D	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	RefSeq:XP_015651040.1	SEG:seg

Description

WRKY GENE 69WRKY transcription factor 69. (Os08t0386200-01)

Coordinates

chr8:+:18220044..18221513

Molecular Weight (calculated)

33552.0 Da

IEP (calculated)

6.661

GRAVY (calculated)

-0.316

Length

319 amino acids

Sequence
(BLAST)

001: MEGVVDGSGA QLVVAELVRV QGLLRQLEAH LSAPCSVELC RGLVAQIVAL TDRSIGIATR SFSSASGGGA HFADTAPPMP ALTSCTPSPL SDGSDHQPFR
101: TTNAKKRKTT ARWTSQVRVS AAGGAEGPAD DGHSWRKYGQ KDILGAKHPR GYYRCTHRNT QGCTATKQVQ RTDDDASLFD VVYHGEHTCR PGAASAAAAK
201: RPHAQTLLQS LSASLTVNTD TNTPLTPENR APAPPLQQQQ QQQSVSASPV ASDSYGLGGA GYGDWRCCDG DLQEVVSALA TVTSAPDHAA MDAADFMSYC
301: FDFDPAVYGG IVGTPSFFL

Best Arabidopsis Sequence Match ( AT4G23810.1 )
(BLAST)

001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY

Arabidopsis Description

WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.