Factsheet for Os11t0116900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0116400-00	Rice	nucleus	95.98	96.85
TraesCS4D01G119700.1	Wheat	nucleus	71.88	72.52
TraesCS4A01G193600.1	Wheat	nucleus	71.88	72.52
TraesCS4B01G121500.1	Wheat	nucleus	71.43	72.07
OQU82729	Sorghum	nucleus	72.32	71.37
OQU78676	Sorghum	nucleus	67.41	67.11
Zm00001d052357_P001	Maize	nucleus	68.3	67.11
HORVU4Hr1G022970.2	Barley	nucleus, plastid	72.77	58.42
Os03t0321700-01	Rice	nucleus	41.07	43.81
Os01t0820400-01	Rice	nucleus	25.0	21.13
Os05t0478800-00	Rice	nucleus	20.98	21.08
Os11t0685700-00	Rice	nucleus	15.18	17.71
Os01t0820700-00	Rice	nucleus	22.32	17.67
Os03t0335200-01	Rice	nucleus	24.55	17.46
Os07t0680400-01	Rice	nucleus	25.45	17.12
Os05t0478700-00	Rice	nucleus	20.54	16.43
Os05t0322900-01	Rice	nucleus	22.77	15.64
Os05t0571200-01	Rice	nucleus	19.2	15.52
Os05t0478400-00	Rice	nucleus	23.66	14.8
Os08t0386200-01	Rice	nucleus	20.54	14.42
Os09t0334500-01	Rice	nucleus	22.77	14.13
Os01t0656400-00	Rice	nucleus	16.52	13.5
Os06t0158100-00	Rice	nucleus	23.21	13.3
Os01t0821600-01	Rice	nucleus	16.07	12.86
Os01t0821300-01	Rice	cytosol, nucleus	10.27	12.17
Os05t0321900-01	Rice	nucleus	20.98	10.98
Os11t0116600-00	Rice	nucleus	4.91	6.21

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:4349610	ProteinID:ABA91239.2	ProteinID:BAT12418.1	ProteinID:EEE51530.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	EnsemblPlantsGene:Os11g0116900	EnsemblPlants:Os11t0116900-01	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31282
PANTHER:PTHR31282:SF7	UniProt:Q2RBC3	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0000D89987	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	RefSeq:XP_015616442.1	SEG:seg	:	:	:

Description

WRKY GENE 46Similar to WRKY DNA binding domain containing protein, expressed. (Os11t0116900-01)

Coordinates

chr11:-:759592..763326

Molecular Weight (calculated)

25188.9 Da

IEP (calculated)

8.444

GRAVY (calculated)

-0.891

Length

224 amino acids

Sequence
(BLAST)

001: MALDSVPSYP SDLGSSRART PQQQRVSPRK EERTWTTDTY APYDDGHQWR KYGEKKLSNS NFPRFYYRCT YKNDMKCPAT KQVQQKDTND PPLFSVTYFN
101: HHTCNSSSKI VGSTPDSTVQ SRKAISICFN SHGQTGEQPT FLSSSASLLS PSMQSYSSNQ QPDMNTYSRQ FQWADTSSST SNAPVKMEAD DYAEASASPS
201: TTGALSRTLL PIGQSRCIEY FHFL

Best Arabidopsis Sequence Match ( AT2G40740.1 )
(BLAST)

001: MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR
101: YGGSTSSQGT EAMFQTQLMA VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK YGQKEILGSR FPRAYYRCTH
201: QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS

Arabidopsis Description

WRKY55WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.