Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G110600.1 | Wheat | nucleus | 53.45 | 56.79 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 52.94 | 55.8 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 53.71 | 55.7 |
| EER87882 | Sorghum | nucleus | 52.17 | 53.97 |
| Zm00001d045283_P001 | Maize | nucleus | 51.92 | 51.26 |
| Zm00001d036244_P001 | Maize | nucleus | 45.27 | 48.36 |
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 28.39 | 34.37 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 25.83 | 32.58 |
| AT4G23810.1 | Thale cress | nucleus | 26.09 | 31.48 |
| CDY03518 | Canola | nucleus | 25.32 | 31.43 |
| VIT_16s0050g02510.t01 | Wine grape | nucleus | 28.9 | 31.04 |
| Os08t0386200-01 | Rice | nucleus | 25.32 | 31.03 |
| Os01t0656400-00 | Rice | nucleus | 21.74 | 31.02 |
| Bra019265.1-P | Field mustard | nucleus | 25.58 | 30.96 |
| CDX94221 | Canola | nucleus | 25.32 | 30.84 |
| Bra013732.1-P | Field mustard | nucleus | 24.81 | 30.7 |
| Os05t0571200-01 | Rice | nucleus | 21.74 | 30.69 |
| CDY65042 | Canola | nucleus | 25.83 | 30.61 |
| CDY47621 | Canola | nucleus | 24.55 | 30.38 |
| CDY10969 | Canola | nucleus | 25.06 | 30.34 |
| KRH64503 | Soybean | nucleus | 28.13 | 30.22 |
| KRH77637 | Soybean | nucleus | 24.81 | 30.12 |
| PGSC0003DMT400031695 | Potato | nucleus | 26.09 | 30.09 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 26.09 | 29.82 |
| AT4G11070.1 | Thale cress | nucleus | 23.79 | 29.71 |
| CDY25271 | Canola | nucleus | 25.06 | 29.61 |
| Bra033158.1-P | Field mustard | nucleus | 25.06 | 29.61 |
| Solyc08g082110.2.1 | Tomato | nucleus | 25.58 | 29.5 |
| Os09t0334500-01 | Rice | nucleus | 27.11 | 29.36 |
| KRH68901 | Soybean | nucleus | 27.11 | 29.28 |
| KRH06499 | Soybean | nucleus | 27.88 | 29.22 |
| KRG97154 | Soybean | nucleus | 26.85 | 29.01 |
| KRH47935 | Soybean | nucleus | 27.37 | 29.0 |
| AT5G24110.1 | Thale cress | nucleus | 22.25 | 28.71 |
| KRH53440 | Soybean | nucleus | 26.6 | 28.57 |
| CDX80414 | Canola | nucleus | 22.76 | 28.43 |
| Bra009734.1-P | Field mustard | nucleus | 22.76 | 28.43 |
| CDX88077 | Canola | nucleus | 22.76 | 28.43 |
| CDX87141 | Canola | nucleus | 22.51 | 28.21 |
| Bra026467.1-P | Field mustard | nucleus | 22.51 | 28.21 |
| KRH60029 | Soybean | nucleus | 26.09 | 28.1 |
| PGSC0003DMT400014949 | Potato | nucleus | 25.83 | 28.06 |
| KRH41300 | Soybean | nucleus | 25.58 | 27.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.97 | 27.8 |
| CDY19847 | Canola | nucleus | 21.99 | 27.56 |
| Solyc10g009550.2.1 | Tomato | nucleus | 20.2 | 27.24 |
| Solyc08g008280.2.1 | Tomato | nucleus | 25.06 | 27.22 |
| Os11t0685700-00 | Rice | nucleus | 13.3 | 27.08 |
| Solyc03g007380.1.1 | Tomato | nucleus | 24.3 | 26.91 |
| Solyc05g050300.1.1 | Tomato | nucleus | 13.3 | 26.67 |
| PGSC0003DMT400023502 | Potato | nucleus | 24.04 | 26.4 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 23.53 | 26.36 |
| PGSC0003DMT400051194 | Potato | nucleus | 19.44 | 26.21 |
| Bra004540.1-P | Field mustard | nucleus | 18.67 | 25.61 |
| Solyc01g095630.2.1 | Tomato | nucleus | 21.99 | 25.6 |
| PGSC0003DMT400000599 | Potato | nucleus | 22.51 | 25.43 |
| CDX89127 | Canola | nucleus | 17.9 | 25.27 |
| Bra014426.1-P | Field mustard | nucleus | 17.9 | 25.27 |
| CDX80015 | Canola | nucleus | 18.93 | 25.0 |
| CDY42043 | Canola | nucleus | 18.67 | 24.91 |
| Bra000423.1-P | Field mustard | nucleus | 17.65 | 24.56 |
| Os12t0116400-00 | Rice | nucleus | 13.81 | 24.32 |
| Os05t0478800-00 | Rice | nucleus | 13.81 | 24.22 |
| AT2G46400.1 | Thale cress | nucleus | 18.16 | 24.07 |
| CDX95699 | Canola | nucleus | 17.39 | 23.86 |
| Os03t0321700-01 | Rice | nucleus | 12.79 | 23.81 |
| CDX83367 | Canola | nucleus | 16.88 | 23.74 |
| Os11t0116900-01 | Rice | nucleus | 13.3 | 23.21 |
| PGSC0003DMT400046351 | Potato | nucleus | 16.88 | 21.93 |
| Os07t0680400-01 | Rice | nucleus | 18.41 | 21.62 |
| Os01t0821600-01 | Rice | nucleus | 15.09 | 21.07 |
| Solyc05g050330.2.1 | Tomato | nucleus | 13.04 | 20.9 |
| PGSC0003DMT400084227 | Potato | nucleus | 15.09 | 20.07 |
| Os01t0820700-00 | Rice | nucleus | 14.32 | 19.79 |
| PGSC0003DMT400084214 | Potato | nucleus | 16.37 | 19.34 |
| Os05t0322900-01 | Rice | nucleus | 15.86 | 19.02 |
| Os01t0820400-01 | Rice | nucleus | 12.79 | 18.87 |
| Solyc05g050340.2.1 | Tomato | nucleus | 15.35 | 18.35 |
| Os05t0478400-00 | Rice | nucleus | 16.62 | 18.16 |
| Os03t0335200-01 | Rice | nucleus | 14.32 | 17.78 |
| Os05t0321900-01 | Rice | nucleus | 17.9 | 16.36 |
| Os05t0478700-00 | Rice | nucleus | 11.51 | 16.07 |
| Os01t0821300-01 | Rice | cytosol, nucleus | 6.91 | 14.29 |
| CDX80415 | Canola | nucleus | 4.6 | 12.16 |
| Solyc05g050310.1.1 | Tomato | cytosol, nucleus | 1.79 | 11.86 |
| Os11t0116600-00 | Rice | nucleus | 3.58 | 7.91 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:4340188 | ProteinID:BAD69197.1 | ProteinID:BAD69435.1 | ProteinID:BAF18777.1 |
| ProteinID:BAS96257.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:IPR003657 | InterPro:IPR036576 | EnsemblPlantsGene:Os06g0158100 | EnsemblPlants:Os06t0158100-00 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR32096 | PANTHER:PTHR32096:SF24 | UniProt:Q5VMX9 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00004026DC |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | RefSeq:XP_015643057.1 | SEG:seg | : | : |
Description
WRKY GENE 113Similar to WRKY transcription factor 63. (Os06t0158100-00)
Coordinates
chr6:+:2959754..2963006
Molecular Weight (calculated)
41405.7 Da
IEP (calculated)
6.191
GRAVY (calculated)
-0.646
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGDIHLLL SILADGEEQA RQLGEPAAAA DDEYHGGGRG EEYYRGVARQ LQGTLARAMG IARAIEAAAF AGGGGGGGAS GSRGTTGDRS DSPRSADESS
101: GRTARDAAVA QQERHHDTIK RRKGLPRWTE KFRVPDASLE ATPDDGFSWR KYGQKDILGA KFPRGYYRCT YRNAQGCPAT KQVQRSDADL AVFDVTYQGA
201: HTCHQKQRRA AAAGDQPPPP PPQADPSVEL LVNFRHGLKV ETNGLAPPPP PPPTTTTNFH DDQHFCFPSM PPFHAGVGPP PPPDDALGGG CNNFSSPPFV
301: SPAGSAAGES YFSMEHSYEP RGGGGHFVMS RGDSSELHEV VSAAASSSAV VDPAAAAGGF DYPLYHGEVD PHLPFPPLFG HASMYGQYRD A
101: GRTARDAAVA QQERHHDTIK RRKGLPRWTE KFRVPDASLE ATPDDGFSWR KYGQKDILGA KFPRGYYRCT YRNAQGCPAT KQVQRSDADL AVFDVTYQGA
201: HTCHQKQRRA AAAGDQPPPP PPQADPSVEL LVNFRHGLKV ETNGLAPPPP PPPTTTTNFH DDQHFCFPSM PPFHAGVGPP PPPDDALGGG CNNFSSPPFV
301: SPAGSAAGES YFSMEHSYEP RGGGGHFVMS RGDSSELHEV VSAAASSSAV VDPAAAAGGF DYPLYHGEVD PHLPFPPLFG HASMYGQYRD A
001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
Arabidopsis Description
WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.