Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_15s0046g01140.t01 | Wine grape | nucleus | 46.7 | 52.63 |
| VIT_02s0025g01280.t01 | Wine grape | nucleus | 46.15 | 49.12 |
| Solyc03g007380.1.1 | Tomato | nucleus | 40.93 | 42.21 |
| PGSC0003DMT400023502 | Potato | nucleus | 41.21 | 42.13 |
| GSMUA_Achr7P14140_001 | Banana | nucleus | 40.93 | 41.39 |
| GSMUA_Achr1P27980_001 | Banana | nucleus | 34.62 | 40.65 |
| GSMUA_Achr3P15840_001 | Banana | nucleus | 27.75 | 40.56 |
| GSMUA_Achr3P25080_001 | Banana | nucleus | 35.71 | 39.16 |
| GSMUA_Achr6P05710_001 | Banana | nucleus | 35.44 | 37.94 |
| TraesCS2D01G168600.1 | Wheat | nucleus | 29.95 | 37.2 |
| TraesCS2B01G187500.1 | Wheat | nucleus | 29.95 | 37.2 |
| HORVU2Hr1G029430.2 | Barley | mitochondrion, nucleus | 24.73 | 36.89 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.12 | 35.93 |
| TraesCS2A01G161500.1 | Wheat | nucleus | 29.12 | 35.81 |
| Os05t0571200-01 | Rice | nucleus | 27.2 | 35.74 |
| Zm00001d020136_P001 | Maize | nucleus | 29.12 | 35.1 |
| EER96589 | Sorghum | nucleus | 29.67 | 34.84 |
| TraesCS1B01G440700.1 | Wheat | nucleus | 22.8 | 34.44 |
| HORVU5Hr1G034830.3 | Barley | nucleus | 31.04 | 34.04 |
| TraesCS1D01G418600.1 | Wheat | nucleus | 23.08 | 34.01 |
| TraesCS5B01G183700.1 | Wheat | nucleus | 31.59 | 33.92 |
| TraesCS5D01G190700.1 | Wheat | nucleus | 31.59 | 33.72 |
| HORVU3Hr1G059210.1 | Barley | nucleus | 22.53 | 33.61 |
| HORVU1Hr1G090190.2 | Barley | nucleus | 23.35 | 33.46 |
| Zm00001d050247_P001 | Maize | nucleus | 29.4 | 33.44 |
| TraesCS3D01G238300.1 | Wheat | nucleus | 26.65 | 33.33 |
| TraesCS5A01G185600.1 | Wheat | nucleus | 31.32 | 33.24 |
| Os01t0656400-00 | Rice | nucleus | 25.0 | 33.21 |
| TraesCS1A01G410700.1 | Wheat | nucleus | 22.53 | 33.2 |
| TraesCS1D01G418500.1 | Wheat | nucleus | 21.98 | 33.06 |
| Zm00001d020137_P001 | Maize | nucleus | 29.4 | 33.02 |
| TraesCS5A01G185700.1 | Wheat | nucleus | 31.59 | 32.95 |
| TraesCS5B01G183800.1 | Wheat | nucleus | 31.32 | 32.95 |
| Zm00001d005622_P001 | Maize | nucleus | 29.95 | 32.93 |
| EER96590 | Sorghum | nucleus | 29.67 | 32.93 |
| TraesCS1B01G440600.1 | Wheat | nucleus | 21.43 | 32.77 |
| TraesCS5D01G190800.1 | Wheat | nucleus | 31.59 | 32.76 |
| Zm00001d032265_P001 | Maize | nucleus | 29.95 | 32.73 |
| Os09t0334500-01 | Rice | nucleus | 32.14 | 32.41 |
| Os08t0386200-01 | Rice | nucleus | 28.3 | 32.29 |
| HORVU3Hr1G059220.1 | Barley | nucleus | 27.2 | 32.14 |
| OQU80381 | Sorghum | nucleus | 29.95 | 32.06 |
| HORVU1Hr1G090110.1 | Barley | nucleus | 22.25 | 32.02 |
| HORVU1Hr1G090170.1 | Barley | nucleus | 21.7 | 31.98 |
| Os11t0685700-00 | Rice | nucleus | 16.76 | 31.77 |
| TraesCS1D01G418400.1 | Wheat | nucleus | 21.98 | 31.37 |
| HORVU3Hr1G058670.1 | Barley | nucleus | 21.43 | 31.33 |
| TraesCS1D01G418000.1 | Wheat | nucleus | 21.15 | 31.3 |
| TraesCS1B01G440500.1 | Wheat | nucleus | 21.98 | 30.65 |
| TraesCS1B01G440300.1 | Wheat | nucleus | 20.6 | 30.61 |
| EES18716 | Sorghum | nucleus | 22.8 | 30.51 |
| Zm00001d011496_P002 | Maize | nucleus | 27.2 | 30.28 |
| EES03370 | Sorghum | nucleus | 28.57 | 30.06 |
| HORVU1Hr1G090130.4 | Barley | nucleus | 21.43 | 30.0 |
| GSMUA_Achr10P... | Banana | extracellular, nucleus | 25.27 | 29.68 |
| TraesCS1A01G410500.1 | Wheat | nucleus | 20.6 | 29.64 |
| TraesCS1A01G410600.1 | Wheat | nucleus | 18.96 | 29.61 |
| TraesCS7D01G110600.1 | Wheat | nucleus | 29.4 | 29.08 |
| Os06t0158100-00 | Rice | nucleus | 31.04 | 28.9 |
| HORVU5Hr1G056130.2 | Barley | nucleus | 31.04 | 28.83 |
| TraesCS7B01G012600.1 | Wheat | nucleus | 29.12 | 28.57 |
| Zm00001d044010_P001 | Maize | nucleus | 26.1 | 28.36 |
| EER87882 | Sorghum | nucleus | 28.85 | 27.78 |
| Zm00001d036244_P001 | Maize | nucleus | 27.47 | 27.32 |
| TraesCS7A01G116000.1 | Wheat | nucleus | 28.02 | 27.06 |
| Zm00001d045283_P001 | Maize | nucleus | 29.4 | 27.02 |
| GSMUA_Achr4P15640_001 | Banana | nucleus | 25.82 | 26.93 |
| HORVU0Hr1G012740.1 | Barley | nucleus | 23.08 | 26.01 |
| HORVU0Hr1G012750.1 | Barley | nucleus | 23.63 | 25.9 |
| Zm00001d009619_P002 | Maize | nucleus | 20.05 | 24.58 |
| VIT_13s0067g03140.t01 | Wine grape | nucleus | 19.78 | 23.0 |
| VIT_08s0058g01390.t01 | Wine grape | nucleus | 21.98 | 22.41 |
| VIT_13s0067g03130.t01 | Wine grape | nucleus | 19.23 | 19.23 |
Protein Annotations
| EntrezGene:100256922 | wikigene:100256922 | MapMan:15.5.22 | Gene3D:2.20.25.80 | ProteinID:CBI22547 | ProteinID:CBI22547.3 |
| UniProt:E0CUJ8 | EMBL:FN595243 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | EntrezGene:LOC100256922 | wikigene:LOC100256922 | PFAM:PF03106 |
| PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF34 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00015CCD3F |
| ArrayExpress:VIT_16s0050g02510 | EnsemblPlantsGene:VIT_16s0050g02510 | EnsemblPlants:VIT_16s0050g02510.t01 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | RefSeq:XP_002267793 |
| RefSeq:XP_002267793.2 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr16:-:19477129..19479547
Molecular Weight (calculated)
40045.6 Da
IEP (calculated)
5.417
GRAVY (calculated)
-0.704
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MENMGSWEQK NLINELTNGR ELAKQLQIHL SVSSSSHDAR ESLVQKILTS YEKALSLLRC SGPVGEPQAA AAGGGGAIGI GMSESPRSLS GSPRSEDSDK
101: EQEHKDGSRK RKTLPRWTKQ VQMSLGPGPE GPLDDGFSWR KYGQKDILGA KYPRSYYKCT HRNAQGCLAT KQVQRSDDDP TIFEITYRGR HTCTQVSQQI
201: PPPAALPGNQ GLMDSKDHQQ FNLQPQQNQQ QAQDMLLSFQ SGLRVVTEGL DTPSDQAFPP FCFTSTSNIK VEEPGFSPSM MDNNIVGNFP TSFVSPAASR
301: SNYFSMSSDE MNSLGGNQNL QAPEANLNEI ISAAASTTNP QFEQFPFGSM EFDPNFNFDH LGFF
101: EQEHKDGSRK RKTLPRWTKQ VQMSLGPGPE GPLDDGFSWR KYGQKDILGA KYPRSYYKCT HRNAQGCLAT KQVQRSDDDP TIFEITYRGR HTCTQVSQQI
201: PPPAALPGNQ GLMDSKDHQQ FNLQPQQNQQ QAQDMLLSFQ SGLRVVTEGL DTPSDQAFPP FCFTSTSNIK VEEPGFSPSM MDNNIVGNFP TSFVSPAASR
301: SNYFSMSSDE MNSLGGNQNL QAPEANLNEI ISAAASTTNP QFEQFPFGSM EFDPNFNFDH LGFF
001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
Arabidopsis Description
WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.