Factsheet for HORVU5Hr1G034830.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G006660.1
HORVU4Hr1G026290.3
HORVU4Hr1G061550.1
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4
HORVU6Hr1G079810.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23810.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT4G23810.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT4G23810.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT4G23810.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT4G23810.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT4G23810.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT4G23810.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT4G23810.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT4G23810.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT4G23810.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT4G23810.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT4G23810.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT4G23810.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT4G23810.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT4G23810.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT4G23810.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT4G23810.1	HORVU4Hr1G006660.1	AT4G08500.1	17587183
AT4G23810.1	HORVU4Hr1G061550.1	AT4G08500.1	17587183
AT4G23810.1	HORVU6Hr1G079810.1	AT4G08500.1	17587183
AT4G23810.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT4G23810.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT4G23810.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT4G23810.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT4G23810.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT4G23810.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT4G23810.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT4G23810.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G183700.1	Wheat	nucleus	91.27	89.38
HORVU3Hr1G058670.1	Barley	nucleus	66.87	89.16
TraesCS5D01G190700.1	Wheat	nucleus	90.36	87.98
TraesCS5A01G185600.1	Wheat	nucleus	89.76	86.88
HORVU0Hr1G012740.1	Barley	nucleus	67.17	69.04
HORVU0Hr1G012750.1	Barley	nucleus	65.96	65.96
HORVU5Hr1G056130.2	Barley	nucleus	67.17	56.89
HORVU2Hr1G029430.2	Barley	mitochondrion, nucleus	32.83	44.67
GSMUA_Achr3P15840_001	Banana	nucleus	33.43	44.58
GSMUA_Achr3P25080_001	Banana	nucleus	36.45	36.45
VIT_15s0046g01140.t01	Wine grape	nucleus	33.43	34.37
Solyc08g082110.2.1	Tomato	nucleus	34.64	33.92
PGSC0003DMT400031695	Potato	nucleus	34.34	33.63
HORVU3Hr1G059210.1	Barley	nucleus	24.7	33.61
KRH77637	Soybean	nucleus	31.93	32.92
HORVU1Hr1G090170.1	Barley	nucleus	23.49	31.58
VIT_02s0025g01280.t01	Wine grape	nucleus	32.53	31.58
HORVU1Hr1G090190.2	Barley	nucleus	24.1	31.5
HORVU1Hr1G090110.1	Barley	nucleus	23.8	31.23
KRH68901	Soybean	nucleus	34.04	31.22
CDY65042	Canola	nucleus	31.02	31.21
VIT_16s0050g02510.t01	Wine grape	nucleus	34.04	31.04
Bra019265.1-P	Field mustard	nucleus	30.12	30.96
HORVU3Hr1G059220.1	Barley	nucleus	28.61	30.84
CDX94221	Canola	nucleus	29.82	30.84
KRH64503	Soybean	nucleus	33.73	30.77
KRH53440	Soybean	nucleus	33.73	30.77
AT4G11070.1	Thale cress	nucleus	28.92	30.67
CDY10969	Canola	nucleus	29.82	30.65
KRH41300	Soybean	nucleus	32.83	30.36
Solyc10g009550.2.1	Tomato	nucleus	26.51	30.34
PGSC0003DMT400014949	Potato	nucleus	32.83	30.28
CDY25271	Canola	nucleus	30.12	30.21
Bra033158.1-P	Field mustard	nucleus	30.12	30.21
CDY03518	Canola	nucleus	28.61	30.16
KRG97154	Soybean	nucleus	32.83	30.11
HORVU1Hr1G090130.4	Barley	nucleus	23.49	30.0
PGSC0003DMT400051194	Potato	nucleus	26.2	30.0
AT2G46400.1	Thale cress	nucleus	26.51	29.83
CDY47621	Canola	nucleus	28.31	29.75
Bra013732.1-P	Field mustard	nucleus	28.31	29.75
CDX89127	Canola	nucleus	24.7	29.6
Bra014426.1-P	Field mustard	nucleus	24.7	29.6
Solyc08g008280.2.1	Tomato	nucleus	31.93	29.44
AT4G23810.1	Thale cress	nucleus	28.61	29.32
Bra000423.1-P	Field mustard	nucleus	24.4	28.83
HORVU4Hr1G051970.1	Barley	nucleus	10.84	28.8
CDX80414	Canola	nucleus	27.11	28.75
KRH47935	Soybean	nucleus	31.93	28.73
KRH06499	Soybean	nucleus	32.23	28.69
Bra026467.1-P	Field mustard	nucleus	26.81	28.53
AT5G24110.1	Thale cress	nucleus	25.9	28.38
KRH60029	Soybean	nucleus	31.02	28.37
PGSC0003DMT400000599	Potato	nucleus	29.52	28.32
CDX87141	Canola	nucleus	26.51	28.21
Bra004540.1-P	Field mustard	nucleus	24.1	28.07
CDX95699	Canola	nucleus	24.1	28.07
CDX83367	Canola	nucleus	23.49	28.06
CDY19847	Canola	nucleus	26.2	27.88
CDX88077	Canola	nucleus	26.2	27.8
Bra009734.1-P	Field mustard	nucleus	26.2	27.8
Solyc01g095630.2.1	Tomato	nucleus	28.01	27.68
CDX80015	Canola	nucleus	24.4	27.36
Solyc05g050310.1.1	Tomato	cytosol, nucleus	4.82	27.12
CDY42043	Canola	nucleus	23.8	26.96
HORVU6Hr1G013890.3	Barley	nucleus	17.77	26.7
Solyc03g007380.1.1	Tomato	nucleus	28.31	26.63
PGSC0003DMT400023502	Potato	nucleus	27.71	25.84
Solyc05g050330.2.1	Tomato	nucleus	18.07	24.59
PGSC0003DMT400046351	Potato	nucleus	21.69	23.92
HORVU3Hr1G080980.1	Barley	nucleus	17.47	23.67
Solyc05g050300.1.1	Tomato	nucleus	13.86	23.59
PGSC0003DMT400084227	Potato	nucleus	20.48	23.13
HORVU3Hr1G080860.1	Barley	nucleus	17.77	23.05
HORVU1Hr1G069620.7	Barley	nucleus	20.18	22.33
Solyc05g050340.2.1	Tomato	nucleus	21.39	21.71
HORVU0Hr1G030830.1	Barley	nucleus, plastid	18.07	21.43
PGSC0003DMT400084214	Potato	nucleus	21.08	21.15
HORVU7Hr1G083270.2	Barley	nucleus	19.58	21.1
HORVU4Hr1G050320.2	Barley	nucleus	18.37	20.47
HORVU3Hr1G081030.3	Barley	nucleus	19.28	20.0
HORVU4Hr1G052010.2	Barley	nucleus	12.35	19.9
HORVU2Hr1G109330.1	Barley	mitochondrion, nucleus, vacuole	19.28	19.69
HORVU2Hr1G006600.1	Barley	nucleus	18.98	19.63
HORVU3Hr1G080890.1	Barley	nucleus, plastid, vacuole	17.17	19.39
HORVU1Hr1G069640.2	Barley	nucleus	16.27	18.43
CDX80415	Canola	nucleus	8.13	18.24
HORVU2Hr1G017740.3	Barley	nucleus	18.98	18.1
HORVU7Hr1G075960.1	Barley	nucleus, plastid	15.96	18.09
HORVU1Hr1G069610.1	Barley	nucleus	15.66	17.99
HORVU4Hr1G022970.2	Barley	nucleus, plastid	14.16	16.85
HORVU0Hr1G023420.1	Barley	nucleus, plastid	15.66	16.67
HORVU2Hr1G017720.1	Barley	nucleus, plastid	18.37	16.58
HORVU3Hr1G081000.3	Barley	plastid	9.34	15.66
HORVU3Hr1G080960.1	Barley	nucleus	16.87	15.56

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:HORVU5Hr1G034830	EnsemblPlants:HORVU5Hr1G034830.3	InterPro:IPR003657	InterPro:IPR036576	UniProt:M0W8U1
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR32096	PANTHER:PTHR32096:SF33	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI000296C3C9	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:-:237020077..237021943

Molecular Weight (calculated)

35890.1 Da

IEP (calculated)

6.621

GRAVY (calculated)

-0.424

Length

332 amino acids

Sequence
(BLAST)

001: MESVDENGGS RLVVTELGHI KELVRQLGVN LGGCPEHCKR LAAQIFDVTE RSIGMIMSGH FDCPKRSAAG LDSPPFSATP SPLSDVSGMP FHTNNKKRKI
101: MEKRKHQVRV SSEVGGAETP VDDGHSWRKY GQKDILGAKH PRGYYRCTHR KSQGCAATKQ VQRADEDPTL FDVIYHGEHT CIHKTVAALA AGHAEENPGA
201: SRLLQNLSTS LTVNTEGLTA TAGHQGCSTT TSFCFSSQAA RVLAPQEHYP FSMPSTPENC FGQGASLSTS LEPSPVTSDS NRFSMTPFQA EWRARSELDE
301: VVSALVAAGA PAMEETPFSL DGFEFDVSGF FA

Best Arabidopsis Sequence Match ( AT4G11070.1 )
(BLAST)

001: MEMMNWERRS LLNELIHGLK AAKQLQGSSS PSLSASSSYL TTEIKENLLH NIVSSFKKAI LMLNGSTTQH NPTIELAPDP LAHPGKVPGS PASITGNPRS
101: EEFFNVRSKE FNLSSKKRKM LPKWTEQVRI SPERGLEGPH DDIFSWRKYG QKDILGAKFP RSYYRCTFRN TQYCWATKQV QRSDGDPTIF EVTYRGTHTC
201: SQGIPLPEKR ETKPKHTVAV NYQNLRASLT VRTGGLGSEA FSFPVTSPLY TYESINGGGT FYHHVGSSGP SDFTGLISTN TSTGSSPIFD VNFQFDPTAE
301: INTGFPTFFH NSI

Arabidopsis Description

WRKY41Probable WRKY transcription factor 41 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0Y8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.