Factsheet for HORVU4Hr1G006660.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G012740.1
HORVU0Hr1G012750.1
HORVU1Hr1G049500.2
HORVU1Hr1G090110.1
HORVU1Hr1G090130.4
HORVU1Hr1G090170.1
HORVU1Hr1G090190.2
HORVU2Hr1G029430.2
HORVU3Hr1G058670.1
HORVU3Hr1G059210.1
HORVU3Hr1G059220.1
HORVU5Hr1G034830.3
HORVU5Hr1G056130.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G08480.1	HORVU1Hr1G049500.2	AT4G01370.1	22643122
AT4G08500.1	HORVU0Hr1G012740.1	AT4G23810.1	17587183
AT4G08500.1	HORVU0Hr1G012750.1	AT4G23810.1	17587183
AT4G08500.1	HORVU1Hr1G090110.1	AT4G23810.1	17587183
AT4G08500.1	HORVU1Hr1G090130.4	AT4G23810.1	17587183
AT4G08500.1	HORVU1Hr1G090170.1	AT4G23810.1	17587183
AT4G08500.1	HORVU1Hr1G090190.2	AT4G23810.1	17587183
AT4G08500.1	HORVU2Hr1G029430.2	AT4G23810.1	17587183
AT4G08500.1	HORVU3Hr1G058670.1	AT4G23810.1	17587183
AT4G08500.1	HORVU3Hr1G059210.1	AT4G23810.1	17587183
AT4G08500.1	HORVU3Hr1G059220.1	AT4G23810.1	17587183
AT4G08500.1	HORVU5Hr1G034830.3	AT4G23810.1	17587183
AT4G08500.1	HORVU5Hr1G056130.2	AT4G23810.1	17587183

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G272500.1	Wheat	plastid	95.77	96.06
TraesCS4B01G041600.1	Wheat	plastid	96.22	95.65
TraesCS4D01G038900.1	Wheat	plastid	91.84	94.7
OQU91136	Sorghum	cytosol	48.19	85.98
Os03t0703400-01	Rice	plasma membrane	78.7	79.66
Zm00001d033655_P003	Maize	nucleus, plastid	72.96	79.44
Zm00001d013477_P008	Maize	plastid	73.11	78.96
GSMUA_Achr10P...	Banana	cytosol	53.63	67.62
GSMUA_Achr11P...	Banana	cytosol	54.53	66.24
PGSC0003DMT400067237	Potato	cytosol	28.7	65.29
GSMUA_Achr7P11850_001	Banana	mitochondrion, nucleus	52.72	63.0
GSMUA_Achr1P12210_001	Banana	mitochondrion	54.38	62.28
GSMUA_Achr2P07690_001	Banana	nucleus	53.63	61.21
Bra039693.1-P	Field mustard	cytosol	24.62	59.49
VIT_12s0142g00700.t01	Wine grape	cytosol	23.11	57.95
KRH10459	Soybean	cytosol	38.07	57.27
CDY36607	Canola	cytosol	27.04	54.41
CDY24072	Canola	cytosol	28.25	52.53
KRH16616	Soybean	nucleus	45.77	51.36
KRH64744	Soybean	nucleus	43.5	50.88
KRH16614	Soybean	mitochondrion	42.45	50.81
VIT_18s0001g03960.t01	Wine grape	mitochondrion, nucleus	43.5	50.79
KRH53173	Soybean	nucleus	42.45	50.63
KRH18819	Soybean	nucleus	45.32	50.51
VIT_12s0034g00750.t01	Wine grape	cytosol	23.57	49.84
HORVU4Hr1G061550.1	Barley	cytosol, plastid	51.81	49.64
VIT_12s0034g00240.t01	Wine grape	nucleus	31.57	49.53
KRH42244	Soybean	cytosol	34.14	48.09
CDY18020	Canola	cytosol	5.59	47.44
KRH58364	Soybean	cytosol, plastid	35.8	47.4
Bra000647.1-P	Field mustard	cytosol	37.01	45.29
CDY36198	Canola	cytosol	39.27	45.22
HORVU6Hr1G079810.1	Barley	mitochondrion	35.95	45.08
CDY34000	Canola	cytosol	37.31	44.91
CDY69517	Canola	cytosol	37.01	44.63
Solyc07g053170.2.1	Tomato	cytosol	40.33	44.43
Bra037860.1-P	Field mustard	cytosol	39.27	43.41
CDX75154	Canola	cytosol	39.58	43.31
AT4G08500.1	Thale cress	cytosol, mitochondrion	39.12	42.6
PGSC0003DMT400061014	Potato	mitochondrion	42.15	41.89
Solyc01g104530.2.1	Tomato	nucleus	41.99	41.8
KRH10458	Soybean	cytosol	28.4	39.83
AT4G08470.1	Thale cress	cytosol	28.7	33.93
AT4G08480.1	Thale cress	cytosol, plastid	37.46	32.08
CDY18021	Canola	nucleus	19.49	31.46
HORVU2Hr1G062700.17	Barley	cytosol	20.85	28.57
HORVU1Hr1G078750.1	Barley	mitochondrion	11.48	26.12
HORVU1Hr1G078760.1	Barley	cytosol	10.42	25.56
HORVU4Hr1G017100.3	Barley	cytosol, mitochondrion, nucleus	22.66	22.59
HORVU1Hr1G078790.1	Barley	mitochondrion	13.29	21.31
HORVU1Hr1G078860.3	Barley	plastid	12.54	20.54
HORVU0Hr1G030380.1	Barley	vacuole	10.57	19.83
HORVU5Hr1G097530.9	Barley	mitochondrion, plastid	23.57	19.77
HORVU4Hr1G056120.2	Barley	mitochondrion, plasma membrane, vacuole	14.35	19.71
HORVU3Hr1G065630.1	Barley	cytosol, plasma membrane	13.9	19.62
HORVU6Hr1G064150.1	Barley	cytosol	25.53	19.25
HORVU3Hr1G065640.1	Barley	plastid	14.05	18.98
HORVU2Hr1G076510.2	Barley	cytosol	21.45	18.86
HORVU0Hr1G030360.1	Barley	mitochondrion	13.29	18.72
HORVU2Hr1G096350.1	Barley	cytosol	25.08	18.67
HORVU3Hr1G065620.1	Barley	cytosol	14.35	18.45
HORVU1Hr1G078720.4	Barley	mitochondrion	13.29	18.33
HORVU0Hr1G038670.2	Barley	plastid	12.08	17.62
HORVU1Hr1G078710.3	Barley	cytosol	13.9	17.01
HORVU5Hr1G059840.4	Barley	cytosol	15.56	16.72
HORVU6Hr1G002500.1	Barley	plastid	9.67	15.65
HORVU2Hr1G110900.7	Barley	cytosol	17.52	8.72

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.2	Gene3D:3.30.200.20	UniProt:A0A287N2D8	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:HORVU4Hr1G006660	EnsemblPlants:HORVU4Hr1G006660.1	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF404	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000B485346	SEG:seg	:

Description

No Description!

Coordinates

chrchr4H:+:15419487..15425589

Molecular Weight (calculated)

70685.4 Da

IEP (calculated)

5.172

GRAVY (calculated)

-0.415

Length

662 amino acids

Sequence
(BLAST)

001: MFSWARSKQS SPASSSGRRG GDAAAAAMDS GSRRSGGGSG HGSGSGSGSG SGSRGRSPRL ERRNAAKHID YEAGAAAATS VSASWSTSSS ERSPGGRPTR
101: SLDLAARGGG ADFRINGSAE GEVDELCRSL GLSGPEEFAI PVAAWEARKA RSSSDLLSRP RPDPDSSALP VEEPAPVVRT VSAPEVPWPA PHTFPDPIPE
201: ESIHSSSAST ATDSVEEPVA AAPQESPKAT RAVAVAAPVA ALSLLSPRRG GGEVGIRGVR PPVLSPPPPI TGLAPPPARQ SSVADIMSGS AWDIVNSFAP
301: TEGNSELRMT YEHVEASPMS DTEEDNPEEN DEGLTGLEGE LKGWRVGETF EGFTGTSSLS TTNDDDASST NTEAVFVISP NGKFKRNIKS WMRGALLGSG
401: SFGMVYEGIS DEGAFFAVKE VSLLDQGSNA QQSILSLEQE IALLSQFEHE NIVQYYGTDK EESKLYIFIE LVTQGSLSSL YQKYKLRDSQ VSAYTRQILN
501: GLVYLHERNV VHRDIKCANI LVHANGSVKL ADFGLAKEMS KINMLRSCKG SVYWMAPEVV NPRKTYGPAA DMWSLGCTVL EMLTRQIPYP NVEWTNAFFM
601: IGKGEQPPIP SSLSKEAQDF IRQCVRVDPD ERPSASQLLA HPFVNRPLRA SFDSLSPPIN RP

Best Arabidopsis Sequence Match ( AT4G08500.1 )
(BLAST)

001: MDRILARMKK STGRRGGDKN ITPVRRLERR DAARNINYDA ASCSSSSAED LSVSTSSLMT RSLEFPEPTS FRIGGGVGEM DRIYRSLGVS GPDDLAISFD
101: AWEACKKRSS SDVVNRFKSF DLDKVRDQDL SEEGPSGVVV GSDSMNHKVQ GQDLSEAGPS GGIVTELSEI GNLITPVDRL VADGVVENRR VMERTPTIVK
201: SKGYLVPNNV VAVGVGVGGG IKGLRPPVLK PPPAMKRPPI DHRGSSWDFL THFAPSETVK RPSSSSSSSE DGCDEEEGKE EEAEAEEMGA RFIQLGDTAD
301: ETCSFTTNEG DSSSTVSNTS PIYPDGGAII TSWQKGQLLG RGSFGSVYEG ISGDGDFFAV KEVSLLDQGS QAQECIQQLE GEIKLLSQLQ HQNIVRYRGT
401: AKDGSNLYIF LELVTQGSLL KLYQRYQLRD SVVSLYTRQI LDGLKYLHDK GFIHRDIKCA NILVDANGAV KLADFGLAKV SKFNDIKSCK GTPFWMAPEV
501: INRKDSDGYG SPADIWSLGC TVLEMCTGQI PYSDLEPVQA LFRIGRGTLP EVPDTLSLDA RLFILKCLKV NPEERPTAAE LLNHPFVRRP LPSVGSGGSG
601: SASPLLRR

Arabidopsis Description

MEKK1Mitogen-activated protein kinase kinase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39008]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.