Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_02s0025g01280.t01 | |
| VIT_15s0046g02010.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G08480.1 | VIT_15s0046g02010.t01 | AT4G01370.1 | 22643122 |
| AT4G08500.1 | VIT_02s0025g01280.t01 | AT4G23810.1 | 17587183 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_12s0142g00700.t01 | Wine grape | cytosol | 56.23 | 66.67 |
| PGSC0003DMT400067237 | Potato | cytosol | 54.95 | 59.11 |
| Bra039693.1-P | Field mustard | cytosol | 49.2 | 56.2 |
| VIT_12s0034g00240.t01 | Wine grape | nucleus | 68.05 | 50.47 |
| CDY36607 | Canola | cytosol | 48.88 | 46.5 |
| CDY18020 | Canola | cytosol | 11.5 | 46.15 |
| CDY24072 | Canola | cytosol | 50.8 | 44.66 |
| OQU91136 | Sorghum | cytosol | 49.84 | 42.05 |
| TraesCS6A01G327500.1 | Wheat | mitochondrion | 50.16 | 37.56 |
| KRH53173 | Soybean | nucleus | 58.15 | 32.79 |
| VIT_18s0001g03960.t01 | Wine grape | mitochondrion, nucleus | 59.11 | 32.63 |
| KRH64744 | Soybean | nucleus | 58.15 | 32.16 |
| KRH16614 | Soybean | mitochondrion | 54.63 | 30.92 |
| Bra000647.1-P | Field mustard | cytosol | 53.04 | 30.68 |
| GSMUA_Achr11P... | Banana | cytosol | 53.35 | 30.64 |
| TraesCS6B01G358800.1 | Wheat | cytosol | 51.12 | 30.59 |
| GSMUA_Achr10P... | Banana | cytosol | 51.12 | 30.48 |
| Zm00001d052147_P001 | Maize | cytosol | 51.12 | 30.48 |
| Solyc07g053170.2.1 | Tomato | cytosol | 58.15 | 30.28 |
| OQU85800 | Sorghum | mitochondrion | 50.16 | 30.25 |
| CDY69517 | Canola | cytosol | 53.04 | 30.24 |
| TraesCS6D01G307100.1 | Wheat | cytosol | 50.48 | 30.21 |
| CDY34000 | Canola | cytosol | 53.04 | 30.18 |
| HORVU6Hr1G079810.1 | Barley | mitochondrion | 50.8 | 30.11 |
| KRH16616 | Soybean | nucleus | 56.55 | 30.0 |
| KRH18819 | Soybean | nucleus | 56.87 | 29.97 |
| GSMUA_Achr10P... | Banana | cytosol | 53.04 | 29.38 |
| GSMUA_Achr7P11850_001 | Banana | mitochondrion, nucleus | 51.76 | 29.24 |
| VIT_02s0025g03850.t01 | Wine grape | plastid | 22.36 | 28.69 |
| CDY36198 | Canola | cytosol | 52.08 | 28.35 |
| GSMUA_Achr1P12210_001 | Banana | mitochondrion | 52.08 | 28.2 |
| GSMUA_Achr2P07690_001 | Banana | nucleus | 51.44 | 27.76 |
| AT4G08500.1 | Thale cress | cytosol, mitochondrion | 53.35 | 27.47 |
| TraesCS4B01G216700.1 | Wheat | cytosol, plastid | 51.44 | 27.24 |
| Bra037860.1-P | Field mustard | cytosol | 52.08 | 27.21 |
| TraesCS4D01G217000.1 | Wheat | plastid | 51.44 | 27.2 |
| AT4G08470.1 | Thale cress | cytosol | 48.56 | 27.14 |
| Os03t0262200-00 | Rice | cytosol, plastid | 51.44 | 26.97 |
| CDX75154 | Canola | cytosol | 52.08 | 26.94 |
| TraesCS4A01G087700.1 | Wheat | cytosol, plastid | 51.44 | 26.88 |
| EER92515 | Sorghum | cytosol, plastid | 51.76 | 26.82 |
| VIT_12s0035g01230.t01 | Wine grape | nucleus | 30.99 | 26.72 |
| Zm00001d033655_P003 | Maize | nucleus, plastid | 49.84 | 25.66 |
| Zm00001d013477_P008 | Maize | plastid | 49.52 | 25.29 |
| VIT_12s0034g02540.t01 | Wine grape | cytosol | 26.2 | 24.92 |
| Zm00001d028514_P002 | Maize | plastid | 50.8 | 24.35 |
| Os03t0703400-01 | Rice | plasma membrane | 50.48 | 24.16 |
| TraesCS4D01G038900.1 | Wheat | plastid | 49.52 | 24.14 |
| KXG20217 | Sorghum | cytosol | 49.84 | 23.89 |
| HORVU4Hr1G006660.1 | Barley | plastid | 49.84 | 23.57 |
| TraesCS4A01G272500.1 | Wheat | plastid | 49.52 | 23.48 |
| HORVU4Hr1G061550.1 | Barley | cytosol, plastid | 51.44 | 23.3 |
| TraesCS4B01G041600.1 | Wheat | plastid | 49.52 | 23.27 |
| VIT_10s0116g01230.t01 | Wine grape | plastid | 27.8 | 23.2 |
| Zm00001d047875_P003 | Maize | plastid | 47.28 | 23.02 |
| VIT_12s0035g00210.t01 | Wine grape | cytosol | 17.89 | 22.67 |
| VIT_07s0031g00530.t01 | Wine grape | mitochondrion | 26.52 | 22.49 |
| VIT_12s0059g00870.t01 | Wine grape | plastid | 29.39 | 21.9 |
| AT4G08480.1 | Thale cress | cytosol, plastid | 51.12 | 20.7 |
| VIT_18s0001g11240.t01 | Wine grape | cytosol | 34.19 | 20.58 |
| VIT_19s0090g00820.t01 | Wine grape | plastid | 30.67 | 20.43 |
| VIT_07s0130g00300.t01 | Wine grape | nucleus | 24.6 | 20.1 |
| VIT_00s1194g00010.t01 | Wine grape | plastid | 30.99 | 20.0 |
| VIT_04s0044g01290.t01 | Wine grape | nucleus | 38.98 | 19.58 |
| VIT_06s0004g06850.t01 | Wine grape | cytosol | 27.48 | 17.17 |
| VIT_14s0128g00430.t01 | Wine grape | cytosol | 35.46 | 16.57 |
| VIT_05s0020g02910.t01 | Wine grape | nucleus | 36.1 | 16.47 |
| CDY18021 | Canola | nucleus | 21.41 | 16.34 |
| VIT_00s0567g00010.t01 | Wine grape | plastid | 35.78 | 15.84 |
| VIT_02s0025g03370.t01 | Wine grape | cytosol | 43.13 | 14.98 |
| VIT_16s0050g00770.t01 | Wine grape | cytosol | 42.17 | 14.8 |
| VIT_10s0116g01240.t01 | Wine grape | plastid | 27.48 | 10.82 |
| VIT_01s0011g02270.t01 | Wine grape | cytosol | 34.19 | 7.62 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:50.2.7 | ProteinID:CCB48752 | ProteinID:CCB48752.1 | UniProt:F6H8Z9 | EMBL:FN595497 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0006950 | GO:GO:0007049 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007346 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0023014 | GO:GO:0031098 | GO:GO:0032147 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 |
| PIRSF:PIRSF000654 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24361 | PANTHER:PTHR24361:SF409 | InterPro:Prot_kinase_dom |
| SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI000210A0C7 | ArrayExpress:VIT_12s0034g00750 | EnsemblPlantsGene:VIT_12s0034g00750 |
| EnsemblPlants:VIT_12s0034g00750.t01 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr12:+:16523826..16552015
Molecular Weight (calculated)
35277.2 Da
IEP (calculated)
7.136
GRAVY (calculated)
-0.379
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MERNCTSDGF FFAVKEVSLL DQGGKGKQSI YQLEQEISLL SQLEHENIVR YYGTNKDDSK LYIFLELVTK GSLLSLYQKY HLQESQASVY TKQILNGLKY
101: LHEQNVVHRD IKCANILVDV HGSVKIADFG LAKATKLNDV KSCRGTPFWM APEVVNWKNE GYGLATDIWS LGCTVLEMLT RRPPYSHLEG ATKLNDVKSF
201: KGTLRWMAPE VFNQKNEGYG LAVNIWSLGC TVLEMLTCRP PYSNMEDGQV ISKIYRSEPP DVPDSFSSDA RDFILKCLQV NPSDRPTAGE LLDHPFVKRP
301: SGPQSPRTSG IQP
101: LHEQNVVHRD IKCANILVDV HGSVKIADFG LAKATKLNDV KSCRGTPFWM APEVVNWKNE GYGLATDIWS LGCTVLEMLT RRPPYSHLEG ATKLNDVKSF
201: KGTLRWMAPE VFNQKNEGYG LAVNIWSLGC TVLEMLTCRP PYSNMEDGQV ISKIYRSEPP DVPDSFSSDA RDFILKCLQV NPSDRPTAGE LLDHPFVKRP
301: SGPQSPRTSG IQP
001: MDRILARMKK STGRRGGDKN ITPVRRLERR DAARNINYDA ASCSSSSAED LSVSTSSLMT RSLEFPEPTS FRIGGGVGEM DRIYRSLGVS GPDDLAISFD
101: AWEACKKRSS SDVVNRFKSF DLDKVRDQDL SEEGPSGVVV GSDSMNHKVQ GQDLSEAGPS GGIVTELSEI GNLITPVDRL VADGVVENRR VMERTPTIVK
201: SKGYLVPNNV VAVGVGVGGG IKGLRPPVLK PPPAMKRPPI DHRGSSWDFL THFAPSETVK RPSSSSSSSE DGCDEEEGKE EEAEAEEMGA RFIQLGDTAD
301: ETCSFTTNEG DSSSTVSNTS PIYPDGGAII TSWQKGQLLG RGSFGSVYEG ISGDGDFFAV KEVSLLDQGS QAQECIQQLE GEIKLLSQLQ HQNIVRYRGT
401: AKDGSNLYIF LELVTQGSLL KLYQRYQLRD SVVSLYTRQI LDGLKYLHDK GFIHRDIKCA NILVDANGAV KLADFGLAKV SKFNDIKSCK GTPFWMAPEV
501: INRKDSDGYG SPADIWSLGC TVLEMCTGQI PYSDLEPVQA LFRIGRGTLP EVPDTLSLDA RLFILKCLKV NPEERPTAAE LLNHPFVRRP LPSVGSGGSG
601: SASPLLRR
101: AWEACKKRSS SDVVNRFKSF DLDKVRDQDL SEEGPSGVVV GSDSMNHKVQ GQDLSEAGPS GGIVTELSEI GNLITPVDRL VADGVVENRR VMERTPTIVK
201: SKGYLVPNNV VAVGVGVGGG IKGLRPPVLK PPPAMKRPPI DHRGSSWDFL THFAPSETVK RPSSSSSSSE DGCDEEEGKE EEAEAEEMGA RFIQLGDTAD
301: ETCSFTTNEG DSSSTVSNTS PIYPDGGAII TSWQKGQLLG RGSFGSVYEG ISGDGDFFAV KEVSLLDQGS QAQECIQQLE GEIKLLSQLQ HQNIVRYRGT
401: AKDGSNLYIF LELVTQGSLL KLYQRYQLRD SVVSLYTRQI LDGLKYLHDK GFIHRDIKCA NILVDANGAV KLADFGLAKV SKFNDIKSCK GTPFWMAPEV
501: INRKDSDGYG SPADIWSLGC TVLEMCTGQI PYSDLEPVQA LFRIGRGTLP EVPDTLSLDA RLFILKCLKV NPEERPTAAE LLNHPFVRRP LPSVGSGGSG
601: SASPLLRR
Arabidopsis Description
MEKK1Mitogen-activated protein kinase kinase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39008]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.