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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000955.1-P
Bra013732.1-P
Bra019265.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G08480.1 Bra000955.1-P AT4G01370.1 22643122
AT4G08500.1 Bra013732.1-P AT4G23810.1 17587183
AT4G08500.1 Bra019265.1-P AT4G23810.1 17587183
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69517 Canola cytosol 99.63 98.18
CDY34000 Canola cytosol 97.04 95.45
Bra039693.1-P Field mustard cytosol 42.51 83.94
Bra037860.1-P Field mustard cytosol 75.05 67.78
AT4G08500.1 Thale cress cytosol, mitochondrion 75.42 67.11
PGSC0003DMT400067237 Potato cytosol 34.2 63.57
VIT_12s0142g00700.t01 Wine grape cytosol 29.02 59.47
VIT_12s0034g00750.t01 Wine grape cytosol 30.68 53.04
OQU91136 Sorghum cytosol 35.86 52.29
KRH53173 Soybean nucleus 52.68 51.35
KRH64744 Soybean nucleus 52.68 50.35
AT4G08470.1 Thale cress cytosol 49.91 48.21
VIT_12s0034g00240.t01 Wine grape nucleus 37.52 48.1
TraesCS6A01G327500.1 Wheat mitochondrion 36.6 47.37
KRH18819 Soybean nucleus 51.57 46.97
KRH16616 Soybean nucleus 51.02 46.78
GSMUA_Achr11P... Banana cytosol 46.77 46.42
AT4G08480.1 Thale cress cytosol, plastid 66.17 46.31
KRH16614 Soybean mitochondrion 47.32 46.29
GSMUA_Achr10P... Banana cytosol 43.25 44.57
Solyc07g053170.2.1 Tomato cytosol 48.24 43.43
GSMUA_Achr7P11850_001 Banana mitochondrion, nucleus 43.99 42.96
GSMUA_Achr2P07690_001 Banana nucleus 45.84 42.76
GSMUA_Achr1P12210_001 Banana mitochondrion 45.66 42.73
TraesCS6D01G307100.1 Wheat cytosol 41.22 42.64
TraesCS4D01G217000.1 Wheat plastid 46.4 42.4
OQU85800 Sorghum mitochondrion 40.67 42.39
Os03t0262200-00 Rice cytosol, plastid 46.77 42.38
TraesCS6B01G358800.1 Wheat cytosol 40.85 42.26
TraesCS4B01G216700.1 Wheat cytosol, plastid 46.03 42.13
Zm00001d052147_P001 Maize cytosol 40.85 42.1
TraesCS4A01G087700.1 Wheat cytosol, plastid 46.58 42.07
EER92515 Sorghum cytosol, plastid 46.21 41.39
HORVU6Hr1G079810.1 Barley mitochondrion 40.11 41.1
GSMUA_Achr10P... Banana cytosol 42.51 40.71
Zm00001d033655_P003 Maize nucleus, plastid 45.47 40.46
Zm00001d013477_P008 Maize plastid 45.47 40.13
TraesCS4D01G038900.1 Wheat plastid 45.84 38.63
Os03t0703400-01 Rice plasma membrane 46.21 38.23
Zm00001d028514_P002 Maize plastid 45.66 37.83
Zm00001d047875_P003 Maize plastid 44.55 37.48
TraesCS4A01G272500.1 Wheat plastid 45.66 37.42
TraesCS4B01G041600.1 Wheat plastid 45.66 37.09
HORVU4Hr1G006660.1 Barley plastid 45.29 37.01
HORVU4Hr1G061550.1 Barley cytosol, plastid 46.77 36.61
Bra022773.1-P Field mustard plastid 12.2 34.38
KXG20217 Sorghum cytosol 40.3 33.38
Bra012131.1-P Field mustard cytosol 19.41 30.35
Bra015388.1-P Field mustard cytosol, plasma membrane, plastid 18.67 29.97
Bra030001.1-P Field mustard cytosol 18.48 29.5
Bra036070.1-P Field mustard cytosol 17.56 27.78
Bra031828.1-P Field mustard nucleus, plasma membrane 12.94 26.62
Bra018010.1-P Field mustard mitochondrion 16.08 26.52
Bra021794.1-P Field mustard mitochondrion 17.38 26.33
Bra011739.1-P Field mustard plastid 16.82 25.71
Bra013139.1-P Field mustard nucleus 27.91 25.51
Bra005599.1-P Field mustard mitochondrion 17.01 25.07
Bra013996.1-P Field mustard mitochondrion 17.19 23.97
Bra035552.1-P Field mustard cytosol 18.11 22.74
Bra002933.1-P Field mustard cytosol 18.48 22.68
Bra026395.1-P Field mustard plastid 18.85 22.27
Bra010423.1-P Field mustard mitochondrion, plastid 19.41 22.25
Bra025496.1-P Field mustard cytosol 8.13 22.22
Bra028991.1-P Field mustard cytosol 18.48 22.17
Bra018220.1-P Field mustard nucleus 16.27 21.46
Bra012110.1-P Field mustard nucleus 26.99 20.83
Bra018588.1-P Field mustard nucleus 24.77 20.74
Bra020785.1-P Field mustard cytosol 24.58 20.4
Bra002635.1-P Field mustard plastid 18.3 20.16
Bra027792.1-P Field mustard nucleus 31.98 19.7
Bra018344.1-P Field mustard cytosol 9.43 15.27
Bra039396.1-P Field mustard cytosol 18.3 9.51
Bra001280.1-P Field mustard cytosol 22.37 9.29
Bra001510.1-P Field mustard cytosol 22.37 8.94
Bra027424.1-P Field mustard extracellular 0.37 1.1
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.2.2EnsemblPlantsGene:Bra000647EnsemblPlants:Bra000647.1EnsemblPlants:Bra000647.1-Pncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:Kinase-like_dom_sfUniProt:M4C8W9PFAM:PF00069
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24361PANTHER:PTHR24361:SF627InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI000254026BSEG:seg
Description
AT4G08500 (E=2e-146) MEKK1, ATMEKK1, MAPKKK8, ARAKIN | MEKK1 (MAP KINASE KINASE KINASE 1); DNA binding / MAP kinase kinase kinase/ kinase/ kinase binding / protein binding
Coordinates
chrA03:-:12253119..12255540
Molecular Weight (calculated)
58198.6 Da
IEP (calculated)
5.989
GRAVY (calculated)
-0.305
Length
541 amino acids
Sequence
(BLAST)
001: MKKASGRRGA ERKLERIGAL KNVNYDAASS SSSSADDLSV STSSLMTRSL EVDRTSFRIF GGGDGELDRI FKSIGVSGPD DLAISFDAWE ASMMRSSSEV
101: INRSNSFDHD WSGPGPGGDA NSEIGSLADR VVVDGGGTKR GLQRVMSRGY LVPSSTDVVP VGGGGGGIKG VRPSVLKPPP AKRPPIDHQG SSWDFLMHLG
201: PEDEIVKRPS SSSSSSSSDK ADEVEAQGRL LAVTADESCS FTTNEGGDSS STVSNTSPVY SSGTIITSWL KGDLLGRGSF GSVYEGISGD GDFFAVKEVS
301: LIDQGSQAQE CIQQLEREIA LLSQLQHQNI VRYRGTAKDG SNLYIFLELV SQGSLLKLYQ KYPLRDSVVS TYTRQILDGL KYLHGEGFIH RDIKCANILV
401: DASGAVKLAD FGLAKVSKLN DIKSSKGTPF WMAPEVINLK RSDGYGSSAD IWSLGCTVLE LLTRKIPYCD LENPYQALFR IGKGELPDIP DTLSLDARDF
501: IIKCLRVNPE ERPTAAELLN HPFVKRPLST SGSGIKIFTS P
Best Arabidopsis Sequence Match ( AT4G08500.1 )
(BLAST)
001: MDRILARMKK STGRRGGDKN ITPVRRLERR DAARNINYDA ASCSSSSAED LSVSTSSLMT RSLEFPEPTS FRIGGGVGEM DRIYRSLGVS GPDDLAISFD
101: AWEACKKRSS SDVVNRFKSF DLDKVRDQDL SEEGPSGVVV GSDSMNHKVQ GQDLSEAGPS GGIVTELSEI GNLITPVDRL VADGVVENRR VMERTPTIVK
201: SKGYLVPNNV VAVGVGVGGG IKGLRPPVLK PPPAMKRPPI DHRGSSWDFL THFAPSETVK RPSSSSSSSE DGCDEEEGKE EEAEAEEMGA RFIQLGDTAD
301: ETCSFTTNEG DSSSTVSNTS PIYPDGGAII TSWQKGQLLG RGSFGSVYEG ISGDGDFFAV KEVSLLDQGS QAQECIQQLE GEIKLLSQLQ HQNIVRYRGT
401: AKDGSNLYIF LELVTQGSLL KLYQRYQLRD SVVSLYTRQI LDGLKYLHDK GFIHRDIKCA NILVDANGAV KLADFGLAKV SKFNDIKSCK GTPFWMAPEV
501: INRKDSDGYG SPADIWSLGC TVLEMCTGQI PYSDLEPVQA LFRIGRGTLP EVPDTLSLDA RLFILKCLKV NPEERPTAAE LLNHPFVRRP LPSVGSGGSG
601: SASPLLRR
Arabidopsis Description
MEKK1Mitogen-activated protein kinase kinase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39008]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.