Factsheet for PGSC0003DMT400067237

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400014949
PGSC0003DMT400031695
PGSC0003DMT400055751

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G08480.1	PGSC0003DMT400055751	AT4G01370.1	22643122
AT4G08500.1	PGSC0003DMT400014949	AT4G23810.1	17587183
AT4G08500.1	PGSC0003DMT400031695	AT4G23810.1	17587183

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039693.1-P	Field mustard	cytosol	58.42	62.04
VIT_12s0142g00700.t01	Wine grape	cytosol	54.64	60.23
VIT_12s0034g00750.t01	Wine grape	cytosol	59.11	54.95
CDY18020	Canola	cytosol	14.09	52.56
CDY36607	Canola	cytosol	57.73	51.06
OQU91136	Sorghum	cytosol	64.6	50.67
CDY24072	Canola	cytosol	60.14	49.16
VIT_12s0034g00240.t01	Wine grape	nucleus	68.73	47.39
Solyc07g053170.2.1	Tomato	cytosol	93.13	45.09
TraesCS6A01G327500.1	Wheat	mitochondrion	60.82	42.34
KRH16614	Soybean	mitochondrion	73.2	38.52
KRH53173	Soybean	nucleus	71.82	37.66
KRH64744	Soybean	nucleus	72.51	37.28
KRH16616	Soybean	nucleus	74.57	36.78
GSMUA_Achr11P...	Banana	cytosol	67.35	35.96
KRH18819	Soybean	nucleus	72.85	35.69
GSMUA_Achr10P...	Banana	cytosol	64.26	35.62
GSMUA_Achr7P11850_001	Banana	mitochondrion, nucleus	66.67	35.02
PGSC0003DMT400083928	Potato	cytosol	24.05	34.83
Bra000647.1-P	Field mustard	cytosol	63.57	34.2
Zm00001d052147_P001	Maize	cytosol	61.17	33.9
TraesCS6B01G358800.1	Wheat	cytosol	60.82	33.84
OQU85800	Sorghum	mitochondrion	60.14	33.72
CDY69517	Canola	cytosol	63.57	33.7
TraesCS6D01G307100.1	Wheat	cytosol	60.48	33.65
CDY34000	Canola	cytosol	63.57	33.64
HORVU6Hr1G079810.1	Barley	mitochondrion	60.48	33.33
GSMUA_Achr2P07690_001	Banana	nucleus	66.32	33.28
Os03t0262200-00	Rice	cytosol, plastid	67.01	32.66
CDY36198	Canola	cytosol	64.26	32.52
GSMUA_Achr1P12210_001	Banana	mitochondrion	64.26	32.35
EER92515	Sorghum	cytosol, plastid	67.01	32.28
TraesCS4B01G216700.1	Wheat	cytosol, plastid	65.29	32.15
TraesCS4D01G217000.1	Wheat	plastid	65.29	32.09
GSMUA_Achr10P...	Banana	cytosol	62.2	32.04
AT4G08500.1	Thale cress	cytosol, mitochondrion	65.98	31.58
TraesCS4A01G087700.1	Wheat	cytosol, plastid	64.95	31.55
Bra037860.1-P	Field mustard	cytosol	64.26	31.22
CDX75154	Canola	cytosol	64.26	30.91
AT4G08470.1	Thale cress	cytosol	59.11	30.71
Zm00001d033655_P003	Maize	nucleus, plastid	63.92	30.59
Zm00001d013477_P008	Maize	plastid	63.57	30.18
PGSC0003DMT400063858	Potato	cytosol	42.27	29.64
TraesCS4D01G038900.1	Wheat	plastid	65.29	29.59
Zm00001d028514_P002	Maize	plastid	65.98	29.4
Os03t0703400-01	Rice	plasma membrane	64.95	28.9
TraesCS4A01G272500.1	Wheat	plastid	65.29	28.79
Zm00001d047875_P003	Maize	plastid	63.57	28.77
HORVU4Hr1G006660.1	Barley	plastid	65.29	28.7
PGSC0003DMT400024024	Potato	cytosol	15.81	28.57
PGSC0003DMT400044024	Potato	mitochondrion	29.55	28.57
PGSC0003DMT400044025	Potato	mitochondrion	29.55	28.57
TraesCS4B01G041600.1	Wheat	plastid	65.29	28.53
PGSC0003DMT400038863	Potato	cytosol, mitochondrion, plastid	32.65	28.44
PGSC0003DMT400090976	Potato	mitochondrion	32.65	28.19
PGSC0003DMT400064172	Potato	cytosol	34.02	27.89
PGSC0003DMT400038860	Potato	cytosol	31.96	27.84
PGSC0003DMT400061014	Potato	mitochondrion	63.57	27.78
PGSC0003DMT400038864	Potato	extracellular	31.96	27.68
PGSC0003DMT400052710	Potato	mitochondrion, plastid	29.9	27.53
KXG20217	Sorghum	cytosol	61.17	27.26
HORVU4Hr1G061550.1	Barley	cytosol, plastid	64.6	27.21
PGSC0003DMT400038374	Potato	cytosol, mitochondrion, plasma membrane, plastid	26.12	27.05
PGSC0003DMT400090575	Potato	cytosol	29.55	26.3
PGSC0003DMT400068616	Potato	cytosol, mitochondrion	15.46	26.16
PGSC0003DMT400067198	Potato	mitochondrion	27.84	25.88
PGSC0003DMT400067115	Potato	mitochondrion	25.77	25.86
PGSC0003DMT400052743	Potato	cytosol	29.21	25.76
PGSC0003DMT400052693	Potato	cytosol	29.21	25.76
PGSC0003DMT400052702	Potato	mitochondrion	29.9	25.59
PGSC0003DMT400065492	Potato	nucleus	30.93	25.28
PGSC0003DMT400010340	Potato	nucleus	30.93	25.0
PGSC0003DMT400010342	Potato	cytosol, plastid	30.93	25.0
PGSC0003DMT400075969	Potato	golgi, mitochondrion	27.84	24.92
PGSC0003DMT400090653	Potato	cytosol	24.05	24.91
PGSC0003DMT400038861	Potato	plastid	32.3	24.8
PGSC0003DMT400010341	Potato	cytosol	29.9	24.44
PGSC0003DMT400024020	Potato	cytosol	24.05	24.39
PGSC0003DMT400067126	Potato	mitochondrion	29.9	24.37
PGSC0003DMT400090482	Potato	extracellular, mitochondrion, plasma membrane, plastid	14.78	23.76
PGSC0003DMT400072002	Potato	mitochondrion	28.18	23.56
AT4G08480.1	Thale cress	cytosol, plastid	62.2	23.42
PGSC0003DMT400073788	Potato	nucleus	48.45	22.96
PGSC0003DMT400036857	Potato	mitochondrion	31.96	22.96
PGSC0003DMT400092406	Potato	cytosol	27.15	22.57
PGSC0003DMT400057171	Potato	plastid	35.05	22.22
PGSC0003DMT400088687	Potato	cytosol	15.12	21.89
PGSC0003DMT400073303	Potato	nucleus	31.27	21.06
CDY18021	Canola	nucleus	29.55	20.98
PGSC0003DMT400001980	Potato	nucleus, plastid	41.58	19.24
PGSC0003DMT400067129	Potato	mitochondrion	15.46	18.37
PGSC0003DMT400026093	Potato	nucleus, plastid	40.21	18.25
PGSC0003DMT400039936	Potato	plastid	42.27	17.98
PGSC0003DMT400076066	Potato	mitochondrion	14.09	17.52
PGSC0003DMT400020760	Potato	plastid	41.92	17.21
PGSC0003DMT400023236	Potato	cytosol	40.55	17.15
PGSC0003DMT400031805	Potato	cytosol	46.74	15.56
PGSC0003DMT400040869	Potato	cytosol	47.42	15.51
PGSC0003DMT400092021	Potato	cytosol	9.62	14.14
PGSC0003DMT400019785	Potato	plastid	3.09	1.33

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102597910	MapMan:18.4.2.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1CGY3	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG402026149	PGSC:PGSC0003DMG402026149
EnsemblPlants:PGSC0003DMT400067237	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF409	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000295E8F2	RefSeq:XP_006360533.1	RefSeq:XP_015170373.1	RefSeq:XP_015170374.1	:	:

Description

Mitogen-activated protein kinase kinase kinase [Source:PGSC_GENE;Acc:PGSC0003DMG402026149]

Coordinates

chr7:-:47826016..47835546

Molecular Weight (calculated)

32424.9 Da

IEP (calculated)

7.952

GRAVY (calculated)

-0.221

Length

291 amino acids

Sequence
(BLAST)

001: MSIISPNGRF TRFITGWDKG GLLGCGSFGS VYEGISHDGF FFAVKEVSLL DQGDGGRESL YQLEQEIEVL RQFEHENIVQ YYGTDKNDSK LYIFLELVTQ
101: GSLLNLYQKC HLRDSQVSAY TRQILHGLKY LHDRNMVHRD IKCANILVHA NGSVKLADFG LAKATKLNVV KSFKGTALWM APEVVNRENP GYGLAADKWG
201: LGCTVLEMLT RQFPYSHLDN PMQVLFHIGK GVPPAVPNTL SEDARNFINH CLQVDPSARP TATQLLEHPF VKQTLPSSSG SASPLNLGRR L

Best Arabidopsis Sequence Match ( AT4G08470.1 )
(BLAST)

001: MDVTAIFAGD ILVQSREYLI PNDVVDVDGG IKAVRPPIIQ PPPGRKLPLI DFPGSSWDFL TYFAPSKTVK RQSSSSSDNT SDKEEVETEE TRGMFVQLGD
101: TAHEACPFAT NEADSSSTVS IISPSYASRG SIVPSWLKRK FLGRVSLGFV YEGSSGSSVG SESTCSLMTP SLEFPDRISF RKKDFSEKGP SRHVWEKRKL
201: TRAKLIENFC NPEDIEPVTS WLKGQLLGEE SFASVYEAIS DSSVGSESTC SLMTPSMEFP DRISFRKRDF SEEGPSGRVK EKRKLMRNKL IENFRKPEDI
301: TSWLKGQLLG RGSYASVYEA ISEDGDFFAV KEVSLLDKGI QAQECIQQLE GEIALLSQLQ HQNIVRYRGT AKDVSKLYIF LELVTQGSVQ KLYERYQLSY
401: TVVSLYTRQI LAGLNYLHDK GFVHRDIKCA NMLVDANGTV KLADFGLAEA SKFNDIMSCK GTLFWMAPEV INRKDSDGNG SPADIWSLGC TVLEMCTGQI
501: PYSDLKPIQA AFKIGRGTLP DVPDTLSLDA RHFILTCLKV NPEERPTAAE LLHHPFVINL

Arabidopsis Description

MAPKKK10Mitogen-activated protein kinase kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0T3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.