Factsheet for PGSC0003DMT400044024

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400044025	Potato	mitochondrion	98.34	98.34
PGSC0003DMT400068616	Potato	cytosol, mitochondrion	27.24	47.67
PGSC0003DMT400052710	Potato	mitochondrion, plastid	46.18	43.99
PGSC0003DMT400052693	Potato	cytosol	47.84	43.64
PGSC0003DMT400052743	Potato	cytosol	47.84	43.64
PGSC0003DMT400067115	Potato	mitochondrion	41.2	42.76
PGSC0003DMT400067198	Potato	mitochondrion	44.19	42.49
PGSC0003DMT400090482	Potato	extracellular, mitochondrion, plasma membrane, plastid	25.25	41.99
PGSC0003DMT400090575	Potato	cytosol	44.85	41.28
PGSC0003DMT400090653	Potato	cytosol	37.54	40.21
PGSC0003DMT400083928	Potato	cytosol	25.91	38.81
PGSC0003DMT400052702	Potato	mitochondrion	43.52	38.53
PGSC0003DMT400067126	Potato	mitochondrion	44.19	37.25
PGSC0003DMT400065492	Potato	nucleus	43.52	36.8
PGSC0003DMT400010342	Potato	cytosol, plastid	42.86	35.83
PGSC0003DMT400024024	Potato	cytosol	18.94	35.4
PGSC0003DMT400038864	Potato	extracellular	39.2	35.12
PGSC0003DMT400010341	Potato	cytosol	40.86	34.55
AT2G18530.1	Thale cress	extracellular	24.25	34.27
PGSC0003DMT400038860	Potato	cytosol	37.87	34.13
PGSC0003DMT400090976	Potato	mitochondrion	38.21	34.12
PGSC0003DMT400010340	Potato	nucleus	40.2	33.61
PGSC0003DMT400067129	Potato	mitochondrion	26.91	33.06
PGSC0003DMT400038374	Potato	cytosol, mitochondrion, plasma membrane, plastid	30.56	32.74
PGSC0003DMT400038863	Potato	cytosol, mitochondrion, plastid	36.21	32.63
PGSC0003DMT400075969	Potato	golgi, mitochondrion	34.55	32.0
PGSC0003DMT400072002	Potato	mitochondrion	36.88	31.9
Bra025496.1-P	Field mustard	cytosol	20.6	31.31
CDY39740	Canola	cytosol	20.6	31.31
PGSC0003DMT400092406	Potato	cytosol	35.55	30.57
PGSC0003DMT400036857	Potato	mitochondrion	40.53	30.12
PGSC0003DMT400067237	Potato	cytosol	28.57	29.55
PGSC0003DMT400038861	Potato	plastid	37.21	29.55
VIT_07s0130g00300.t01	Wine grape	nucleus	37.54	29.5
CDY07592	Canola	mitochondrion	32.23	29.22
CDY66991	Canola	cytosol	27.91	28.87
Bra018010.1-P	Field mustard	mitochondrion	31.23	28.66
CDY08107	Canola	mitochondrion	31.23	28.66
PGSC0003DMT400024020	Potato	cytosol	27.24	28.57
CDY05900	Canola	mitochondrion	31.89	28.57
PGSC0003DMT400088687	Potato	cytosol	18.94	28.36
PGSC0003DMT400092021	Potato	cytosol	18.6	28.28
PGSC0003DMT400073303	Potato	nucleus	40.2	28.01
PGSC0003DMT400064172	Potato	cytosol	32.89	27.89
CDX86063	Canola	nucleus	33.89	27.13
AT3G46140.1	Thale cress	cytosol	33.22	26.6
Bra018220.1-P	Field mustard	nucleus	35.88	26.34
AT3G45670.1	Thale cress	nucleus	32.89	26.12
CDX68367	Canola	nucleus	34.55	25.87
AT3G45790.1	Thale cress	cytosol	31.23	25.0
Bra013996.1-P	Field mustard	mitochondrion	31.89	24.74
AT3G46160.1	Thale cress	cytosol, nucleus, plastid	32.23	24.68
PGSC0003DMT400057171	Potato	plastid	36.21	23.75
PGSC0003DMT400076066	Potato	mitochondrion	18.27	23.5
CDX99124	Canola	nucleus	28.57	22.75
PGSC0003DMT400063858	Potato	cytosol	27.91	20.24
PGSC0003DMT400073788	Potato	nucleus	28.24	13.84
PGSC0003DMT400023236	Potato	cytosol	31.23	13.66
PGSC0003DMT400061014	Potato	mitochondrion	28.9	13.06
PGSC0003DMT400001980	Potato	nucleus, plastid	26.91	12.88
PGSC0003DMT400026093	Potato	nucleus, plastid	27.24	12.79
PGSC0003DMT400039936	Potato	plastid	27.91	12.28
PGSC0003DMT400020760	Potato	plastid	27.91	11.85
PGSC0003DMT400031805	Potato	cytosol	29.57	10.18
PGSC0003DMT400040869	Potato	cytosol	28.57	9.66
PGSC0003DMT400019785	Potato	plastid	2.33	1.03

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102587595	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BFH8	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400017082	PGSC:PGSC0003DMG400017082
EnsemblPlants:PGSC0003DMT400044024	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF334
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295823C	RefSeq:XP_006367881.1

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400017082]

Coordinates

chr6:-:37712260..37713386

Molecular Weight (calculated)

33981.0 Da

IEP (calculated)

8.790

GRAVY (calculated)

-0.381

Length

301 amino acids

Sequence
(BLAST)

001: MASIRWSRGR TIGKGAEGIV TLATTHNNFS IAVKSSLFSC SKSLQKEREF LNEFQDCSQI IRCFGADVTE EDNNILYNIL LEYAIGGNLA HRIGKKSGLP
101: DFEVKKYSKS ILLGLRVVHG RGFVHGDIKP HNILLVGTEK TAKIADFGFA SKVGIESKKR QLRGTPMYMA PESVLDDEYG TPADIWAFGC TVFEMITGKK
201: VWDCTGINDP LHLLCKIGMQ SPELHDEKLS KQAEDFLNKC VDRDPHSRWT ADLLLNHPFL SSDNNDVHQR KRKELKLVDL CNSTELKLLT NKRRRKIVER
301: C

Best Arabidopsis Sequence Match ( AT3G50310.1 )
(BLAST)

001: MEWVRGETIG FGTFSTVSTA TKSRNSGDFP ALIAVKSTDA YGAASLSNEK SVLDSLGDCP EIIRCYGEDS TVENGEEMHN LLLEYASRGS LASYMKKLGG
101: EGLPESTVRR HTGSVLRGLR HIHAKGFAHC DIKLANILLF NDGSVKIADF GLAMRVDGDL TALRKSVEIR GTPLYMAPEC VNDNEYGSAA DVWALGCAVV
201: EMFSGKTAWS VKEGSHFMSL LIRIGVGDEL PKIPEMLSEE GKDFLSKCFV KDPAKRWTAE MLLNHSFVTI DLEDDHRENF VVKVKDEDKV LMSPKCPFEF
301: DDWDSFTLDS NPSFDSPVER LGSLVSGSIP DWSVGGSWLT VR

Arabidopsis Description

MAPKKK20MKKK20 [Source:UniProtKB/TrEMBL;Acc:A0A178VGW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.