Factsheet for PGSC0003DMT400024020

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400024024	Potato	cytosol	32.4	57.76
PGSC0003DMT400038374	Potato	cytosol, mitochondrion, plasma membrane, plastid	54.7	55.87
Solyc08g076490.2.1	Tomato	cytosol, golgi, nucleus	72.13	54.91
PGSC0003DMT400075969	Potato	golgi, mitochondrion	42.16	37.23
PGSC0003DMT400092406	Potato	cytosol	41.12	33.71
PGSC0003DMT400072002	Potato	mitochondrion	37.63	31.03
PGSC0003DMT400083928	Potato	cytosol	21.6	30.85
KRH00952	Soybean	cytosol	30.66	30.34
KRH55299	Soybean	mitochondrion	25.44	29.55
KRH55302	Soybean	plasma membrane, plastid	30.31	29.49
PGSC0003DMT400052710	Potato	mitochondrion, plastid	32.4	29.43
KRH55037	Soybean	plasma membrane	30.31	29.0
PGSC0003DMT400088687	Potato	cytosol	20.21	28.86
VIT_12s0034g02540.t01	Wine grape	cytosol	31.71	27.66
PGSC0003DMT400067115	Potato	mitochondrion	27.87	27.59
PGSC0003DMT400044025	Potato	mitochondrion	28.92	27.57
PGSC0003DMT400067198	Potato	mitochondrion	29.97	27.48
PGSC0003DMT400076066	Potato	mitochondrion	22.3	27.35
PGSC0003DMT400052743	Potato	cytosol	31.36	27.27
PGSC0003DMT400052693	Potato	cytosol	31.36	27.27
PGSC0003DMT400044024	Potato	mitochondrion	28.57	27.24
PGSC0003DMT400052702	Potato	mitochondrion	32.06	27.06
PGSC0003DMT400090482	Potato	extracellular, mitochondrion, plasma membrane, plastid	16.72	26.52
PGSC0003DMT400065492	Potato	nucleus	32.4	26.12
PGSC0003DMT400067126	Potato	mitochondrion	32.4	26.05
PGSC0003DMT400010341	Potato	cytosol	31.71	25.56
PGSC0003DMT400038864	Potato	extracellular	29.62	25.3
PGSC0003DMT400010342	Potato	cytosol, plastid	31.36	25.0
PGSC0003DMT400038863	Potato	cytosol, mitochondrion, plastid	28.57	24.55
PGSC0003DMT400038860	Potato	cytosol	28.22	24.25
PGSC0003DMT400010340	Potato	nucleus	30.31	24.17
PGSC0003DMT400067237	Potato	cytosol	24.39	24.05
PGSC0003DMT400090976	Potato	mitochondrion	28.22	24.04
PGSC0003DMT400090575	Potato	cytosol	27.18	23.85
PGSC0003DMT400068616	Potato	cytosol, mitochondrion	14.29	23.84
PGSC0003DMT400090653	Potato	cytosol	22.65	23.13
PGSC0003DMT400038861	Potato	plastid	30.31	22.96
PGSC0003DMT400064172	Potato	cytosol	28.22	22.82
PGSC0003DMT400036857	Potato	mitochondrion	31.36	22.22
PGSC0003DMT400073303	Potato	nucleus	32.06	21.3
PGSC0003DMT400067129	Potato	mitochondrion	17.77	20.82
PGSC0003DMT400063858	Potato	cytosol	25.09	17.35
PGSC0003DMT400057171	Potato	plastid	26.48	16.56
PGSC0003DMT400092021	Potato	cytosol	11.15	16.16
PGSC0003DMT400073788	Potato	nucleus	24.74	11.56
PGSC0003DMT400023236	Potato	cytosol	25.78	10.76
PGSC0003DMT400001980	Potato	nucleus, plastid	23.0	10.49
PGSC0003DMT400026093	Potato	nucleus, plastid	22.65	10.14
PGSC0003DMT400039936	Potato	plastid	24.04	10.09
PGSC0003DMT400061014	Potato	mitochondrion	23.0	9.91
PGSC0003DMT400020760	Potato	plastid	24.04	9.73
PGSC0003DMT400040869	Potato	cytosol	26.83	8.65
PGSC0003DMT400031805	Potato	cytosol	26.13	8.58
CDY23615	Canola	cytosol	0.35	0.76
PGSC0003DMT400019785	Potato	plastid	1.39	0.59

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:107061590	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1AJB6	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400009293	PGSC:PGSC0003DMG400009293	EnsemblPlants:PGSC0003DMT400024020
PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF334	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	UniParc:UPI000294A1F8
RefSeq:XP_015166580.1	:	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400009293]

Coordinates

chr8:-:48796012..48796954

Molecular Weight (calculated)

32724.7 Da

IEP (calculated)

8.895

GRAVY (calculated)

-0.170

Length

287 amino acids

Sequence
(BLAST)

001: MDQWRKLRVL DAGFFEKIYY AVNIHPSSFL SASVAAVKCA DMHRSISLQQ EAKILITLKD SPYVVQFIGA DVSINNDNIS TYNLFLEYAS GGSLHDLINN
101: YKRGMRKMSE LEPANVLVFD NAERGGMHKL KLTDFGLSLR VPKGVAYMTG ATLSNRGTLI YVPPESLTSG FHGRAYDIWL LGCTVTEMMT GSRVWIYRNT
201: RDLQSQIMNE YPMIWGNVSE MANDFLHKCL IKDRLRRWTS EQLLQHPFIQ QVVCSWMPET QRRTARVNPS GCTVSVPEKH LLLHQLV

Best Arabidopsis Sequence Match ( AT5G67080.1 )
(BLAST)

001: MEWIRGETIG YGTFSTVSLA TRSNNDSGEF PPLMAVKSAD SYGAASLANE KSVLDNLGDD CNEIVRCFGE DRTVENGEEM HNLFLEYASR GSLESYLKKL
101: AGEGVPESTV RRHTGSVLRG LRHIHANGFA HCDLKLGNIL LFGDGAVKIA DFGLAKRIGD LTALNYGVQI RGTPLYMAPE SVNDNEYGSE GDVWALGCVV
201: VEMFSGKTAW SLKEGSNFMS LLLRIGVGDE VPMIPEELSE QGRDFLSKCF VKDPKKRWTA EMLLNHPFVT VDVDHDVLVK EEDFVVNMKT EDVSTSPRCP
301: FEFPDWVSVS SGSQTIDSPD ERVASLVTDM IPDWSVTNSW VTVR

Arabidopsis Description

MAPKKK19Mitogen-activated protein kinase kinase kinase 19 [Source:UniProtKB/TrEMBL;Acc:Q9FHA5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.