Factsheet for PGSC0003DMT400072002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g047910.1.1	Tomato	plasma membrane	84.77	60.82
PGSC0003DMT400092406	Potato	cytosol	59.77	59.43
PGSC0003DMT400075969	Potato	golgi, mitochondrion	54.31	58.15
PGSC0003DMT400088687	Potato	cytosol	28.45	49.25
PGSC0003DMT400076066	Potato	mitochondrion	32.18	47.86
PGSC0003DMT400024024	Potato	cytosol	22.13	47.83
PGSC0003DMT400038374	Potato	cytosol, mitochondrion, plasma membrane, plastid	33.62	41.64
PGSC0003DMT400083928	Potato	cytosol	22.41	38.81
KRH55299	Soybean	mitochondrion	26.72	37.65
PGSC0003DMT400024020	Potato	cytosol	31.03	37.63
PGSC0003DMT400044025	Potato	mitochondrion	32.18	37.21
KRH55037	Soybean	plasma membrane	31.9	37.0
KRH55302	Soybean	plasma membrane, plastid	31.32	36.95
PGSC0003DMT400044024	Potato	mitochondrion	31.9	36.88
KRH00952	Soybean	cytosol	29.89	35.86
PGSC0003DMT400068616	Potato	cytosol, mitochondrion	17.53	35.47
PGSC0003DMT400052710	Potato	mitochondrion, plastid	31.32	34.49
VIT_12s0034g02540.t01	Wine grape	cytosol	32.47	34.35
PGSC0003DMT400010342	Potato	cytosol, plastid	34.77	33.61
PGSC0003DMT400065492	Potato	nucleus	33.91	33.15
PGSC0003DMT400010341	Potato	cytosol	33.91	33.15
PGSC0003DMT400067198	Potato	mitochondrion	29.6	32.91
PGSC0003DMT400052702	Potato	mitochondrion	31.61	32.35
PGSC0003DMT400090575	Potato	cytosol	30.17	32.11
PGSC0003DMT400067115	Potato	mitochondrion	26.72	32.07
PGSC0003DMT400090482	Potato	extracellular, mitochondrion, plasma membrane, plastid	16.67	32.04
PGSC0003DMT400038860	Potato	cytosol	30.17	31.44
PGSC0003DMT400090976	Potato	mitochondrion	30.17	31.16
PGSC0003DMT400052693	Potato	cytosol	29.31	30.91
PGSC0003DMT400010340	Potato	nucleus	31.9	30.83
PGSC0003DMT400052743	Potato	cytosol	29.02	30.61
PGSC0003DMT400090653	Potato	cytosol	24.71	30.61
PGSC0003DMT400067126	Potato	mitochondrion	31.32	30.53
PGSC0003DMT400038864	Potato	extracellular	28.74	29.76
PGSC0003DMT400038863	Potato	cytosol, mitochondrion, plastid	28.45	29.64
PGSC0003DMT400064172	Potato	cytosol	29.89	29.3
PGSC0003DMT400067237	Potato	cytosol	23.56	28.18
PGSC0003DMT400067129	Potato	mitochondrion	19.25	27.35
PGSC0003DMT400038861	Potato	plastid	29.31	26.91
PGSC0003DMT400036857	Potato	mitochondrion	30.75	26.42
PGSC0003DMT400073303	Potato	nucleus	31.32	25.23
PGSC0003DMT400057171	Potato	plastid	31.03	23.53
PGSC0003DMT400092021	Potato	cytosol	12.36	21.72
PGSC0003DMT400063858	Potato	cytosol	22.7	19.04
PGSC0003DMT400073788	Potato	nucleus	27.01	15.31
PGSC0003DMT400001980	Potato	nucleus, plastid	24.14	13.35
PGSC0003DMT400026093	Potato	nucleus, plastid	23.85	12.95
PGSC0003DMT400061014	Potato	mitochondrion	24.14	12.61
PGSC0003DMT400039936	Potato	plastid	23.85	12.13
PGSC0003DMT400023236	Potato	cytosol	23.85	12.06
PGSC0003DMT400020760	Potato	plastid	23.85	11.71
PGSC0003DMT400031805	Potato	cytosol	26.44	10.53
PGSC0003DMT400040869	Potato	cytosol	26.72	10.45
CDY23615	Canola	cytosol	0.86	2.27
PGSC0003DMT400019785	Potato	plastid	2.59	1.33

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M1CPK5	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400028014	PGSC:PGSC0003DMG400028014	EnsemblPlants:PGSC0003DMT400072002	PIRSF:PIRSF000654
ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF334	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112	UniParc:UPI0002957E43	:	:	:	:

Description

Protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400028014]

Coordinates

chr7:-:44029220..44030266

Molecular Weight (calculated)

39396.4 Da

IEP (calculated)

8.735

GRAVY (calculated)

-0.256

Length

348 amino acids

Sequence
(BLAST)

001: MSWKKLKLLG RGSYGTVSLA TPLTDYYTLF AAVKSAEDNR SSSLRVEGQI LHALRGSDYV IKCFGEDVSI ENGKKTYNLL LEYAAGGTLH DLIHKSKTVL
101: GESEAAYYAF QILVGICHVH RKGFIHCDLK PAYILVFPGG QHGLANVKLA DFGLSLRSET NTCWDTSVKK CRRRRGTLLY AAPESVVCGI QDKAVDIWAF
201: GCILVEMLTR KRVWSECKNK NELKLKIAHE KLEIPDKISN DAKDFLSKCL DRDHNSRWNA EMLLNHSFIT NYVNKKMIHE LIQRPFGDAG LKTLVSLEHL
301: FTTTSFYYPH NSYLRESSSI ITSLPETNNN NATGDEPLLW MNFRNLHI

Best Arabidopsis Sequence Match ( AT3G45670.1 )
(BLAST)

001: MEIDSEISDS SSSNNSMIPP LPQNPILTVK LSPIILHVRR CSKNIKKKKR TRTPLKKKKK SISSSVESII GVSFKSASQK HSTTVTRDGG VKKISSWVKS
101: RLLGEGAYGC VYLATSKDDI YKTERAIKSA DVLKAWSLMH EGRILRSLQS PFVIRCYGHE IAREGTGHQY NLILEYCSGQ CLADMIEDNQ GGIPEFDVKQ
201: FAIDVLSGLS YIHRRNIIHC EIKPDNLLLS PVDHRFRSNG FLTKIADFGL SMEKGSKEYG NGRGHMRGTT RYMAPELIGG GLLDFAVDIC AFGCSVLEML
301: TGKRVWGEYG DLAHDDWVDL IGHSDLTPQI SIRLSAEAQD FLMRCLVKEP GSRWTIGELV DHPFLCSDEE FSHNGFVYD

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M1E0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.