Factsheet for PGSC0003DMT400052702

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400067126	Potato	mitochondrion	97.35	92.72
Solyc06g065790.1.1	Tomato	mitochondrion	92.35	87.96
PGSC0003DMT400067129	Potato	mitochondrion	60.29	83.67
PGSC0003DMT400052710	Potato	mitochondrion, plastid	77.65	83.54
PGSC0003DMT400090482	Potato	extracellular, mitochondrion, plasma membrane, plastid	41.76	78.45
PGSC0003DMT400092021	Potato	cytosol	43.82	75.25
PGSC0003DMT400052693	Potato	cytosol	72.35	74.55
PGSC0003DMT400052743	Potato	cytosol	72.35	74.55
PGSC0003DMT400067198	Potato	mitochondrion	51.47	55.91
PGSC0003DMT400067115	Potato	mitochondrion	46.47	54.48
PGSC0003DMT400068616	Potato	cytosol, mitochondrion	26.47	52.33
PGSC0003DMT400090575	Potato	cytosol	49.12	51.07
PGSC0003DMT400090653	Potato	cytosol	40.88	49.47
PGSC0003DMT400044025	Potato	mitochondrion	39.12	44.19
PGSC0003DMT400044024	Potato	mitochondrion	38.53	43.52
PGSC0003DMT400083928	Potato	cytosol	22.94	38.81
PGSC0003DMT400024024	Potato	cytosol	17.06	36.02
PGSC0003DMT400010342	Potato	cytosol, plastid	37.35	35.28
PGSC0003DMT400010341	Potato	cytosol	36.76	35.11
PGSC0003DMT400038374	Potato	cytosol, mitochondrion, plasma membrane, plastid	28.53	34.52
PGSC0003DMT400075969	Potato	golgi, mitochondrion	32.65	34.15
PGSC0003DMT400010340	Potato	nucleus	35.59	33.61
PGSC0003DMT400065492	Potato	nucleus	35.0	33.43
PGSC0003DMT400092406	Potato	cytosol	33.53	32.57
PGSC0003DMT400024020	Potato	cytosol	27.06	32.06
PGSC0003DMT400038864	Potato	extracellular	31.47	31.85
PGSC0003DMT400090976	Potato	mitochondrion	31.47	31.75
PGSC0003DMT400072002	Potato	mitochondrion	32.35	31.61
PGSC0003DMT400038860	Potato	cytosol	30.88	31.44
AT2G18530.1	Thale cress	extracellular	19.41	30.99
PGSC0003DMT400038863	Potato	cytosol, mitochondrion, plastid	29.71	30.24
PGSC0003DMT400067237	Potato	cytosol	25.59	29.9
PGSC0003DMT400036857	Potato	mitochondrion	35.59	29.88
CDY07592	Canola	mitochondrion	29.12	29.82
Bra018010.1-P	Field mustard	mitochondrion	28.53	29.57
CDY05900	Canola	mitochondrion	29.12	29.46
VIT_07s0130g00300.t01	Wine grape	nucleus	32.94	29.24
CDY66991	Canola	cytosol	25.0	29.21
AT3G46140.1	Thale cress	cytosol	32.06	28.99
AT3G45670.1	Thale cress	nucleus	31.76	28.5
CDY08107	Canola	mitochondrion	27.35	28.35
PGSC0003DMT400076066	Potato	mitochondrion	19.41	28.21
PGSC0003DMT400073303	Potato	nucleus	35.29	27.78
PGSC0003DMT400064172	Potato	cytosol	28.82	27.61
PGSC0003DMT400088687	Potato	cytosol	16.18	27.36
AT3G45790.1	Thale cress	cytosol	30.0	27.13
PGSC0003DMT400038861	Potato	plastid	29.71	26.65
Bra013996.1-P	Field mustard	mitochondrion	29.41	25.77
CDX86063	Canola	nucleus	27.94	25.27
Bra025496.1-P	Field mustard	cytosol	14.41	24.75
CDY39740	Canola	cytosol	14.41	24.75
Bra018220.1-P	Field mustard	nucleus	29.41	24.39
AT3G46160.1	Thale cress	cytosol, nucleus, plastid	27.06	23.41
CDX68367	Canola	nucleus	27.65	23.38
PGSC0003DMT400057171	Potato	plastid	30.29	22.44
PGSC0003DMT400063858	Potato	cytosol	26.47	21.69
CDX99124	Canola	nucleus	23.53	21.16
PGSC0003DMT400073788	Potato	nucleus	28.24	15.64
PGSC0003DMT400023236	Potato	cytosol	30.0	14.83
PGSC0003DMT400001980	Potato	nucleus, plastid	26.18	14.15
PGSC0003DMT400026093	Potato	nucleus, plastid	26.47	14.04
PGSC0003DMT400061014	Potato	mitochondrion	26.47	13.51
PGSC0003DMT400039936	Potato	plastid	26.76	13.3
PGSC0003DMT400020760	Potato	plastid	26.18	12.55
PGSC0003DMT400031805	Potato	cytosol	27.94	10.87
PGSC0003DMT400040869	Potato	cytosol	27.94	10.67
PGSC0003DMT400019785	Potato	plastid	1.18	0.59

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102597235	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BTV3	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400020457	PGSC:PGSC0003DMG400020457
EnsemblPlants:PGSC0003DMT400052702	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF334	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00029589FD	RefSeq:XP_006353717.1	SEG:seg	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400020457]

Coordinates

chr6:+:45609046..45610068

Molecular Weight (calculated)

37926.8 Da

IEP (calculated)

9.172

GRAVY (calculated)

-0.296

Length

340 amino acids

Sequence
(BLAST)

001: MAGLLWKRGT TLGQGGFGVV SLASTSNALF RGVTLPSLIA LKSCNYGASQ SLKEEVEILQ MFKHSPYIVH CFGANVSFED NVNLYNLLLE YASGGSLADR
101: LQNCNSLSES EVKKHTKNVL LGLSCIHNNG IIHCDIKPGN ILLVGRDKTA KIADFGLSVT LEQGMNQKQG VIRGTERYMA PESVINTEYT SQVDIWALGC
201: TVYELITRTP LWEDADGDDV LDKIEFEEPK FQNSKLSNEA QNFLEKCLVK NPSSRWTADM LLNHTFLQNS SKVANTALTR KKKSDSLHKP IQKITFKIGH
301: HKFSRQLLDP KPLLDKPIKK ITSKIGNRKF VRQLTDLKEV

Best Arabidopsis Sequence Match ( AT1G05100.1 )
(BLAST)

001: MNWTRGKTLG RGSTATVSAA TCHESGETLA VKSAEFHRSE FLQREAKILS SLNSPYVIGY RGCEITREPF HNNGEATTYS LLMEYAPYGT LTDVATKNGG
101: FIDEARVVKY TRQILLGLEY IHNSKGIAHC DIKGSNVLVG ENGEAKIADF GCAKWVEPEI TEPVRGTPAF MAPEAARGER QGKESDIWAV GCTVIEMVTG
201: SQPWIGADFT DPVSVLYRVG YLGELPELPC SLTEQAKDFL GKCLKKEATE RWTASQLLNH PFLVNKEPEL VTGLVTNSPT SVTDQMFWRS VEEEVSEDRS
301: SWWECHEDER IGVLSWIGHV VVESTWDLDG EDWITVRRN

Arabidopsis Description

MAPKKK18Mitogen-activated protein kinase kinase kinase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVP5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.