Factsheet for PGSC0003DMT400061014

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g104530.2.1	Tomato	nucleus	94.44	94.59
PGSC0003DMT400067237	Potato	cytosol	27.78	63.57
KRH10459	Soybean	cytosol	40.99	62.05
OQU91136	Sorghum	cytosol	31.23	56.06
KRH42244	Soybean	cytosol	38.14	54.04
VIT_18s0001g03960.t01	Wine grape	mitochondrion, nucleus	45.05	52.91
KRH58364	Soybean	cytosol, plastid	38.44	51.2
GSMUA_Achr10P...	Banana	cytosol	40.24	51.05
TraesCS6A01G327500.1	Wheat	mitochondrion	31.38	50.0
GSMUA_Achr11P...	Banana	cytosol	40.69	49.72
GSMUA_Achr7P11850_001	Banana	mitochondrion, nucleus	39.04	46.93
Zm00001d033655_P003	Maize	nucleus, plastid	41.74	45.72
TraesCS6D01G307100.1	Wheat	cytosol	35.74	45.51
GSMUA_Achr10P...	Banana	cytosol	38.29	45.13
GSMUA_Achr2P07690_001	Banana	nucleus	39.19	45.0
TraesCS6B01G358800.1	Wheat	cytosol	35.29	44.93
Os03t0262200-00	Rice	cytosol, plastid	39.94	44.56
HORVU6Hr1G079810.1	Barley	mitochondrion	35.29	44.51
TraesCS4D01G038900.1	Wheat	plastid	42.79	44.39
Zm00001d013477_P008	Maize	plastid	40.84	44.37
OQU85800	Sorghum	mitochondrion	34.53	44.32
GSMUA_Achr1P12210_001	Banana	mitochondrion	38.29	44.12
TraesCS4D01G217000.1	Wheat	plastid	39.04	43.92
TraesCS4B01G216700.1	Wheat	cytosol, plastid	38.89	43.82
TraesCS4A01G087700.1	Wheat	cytosol, plastid	39.19	43.57
Zm00001d052147_P001	Maize	cytosol	34.23	43.43
TraesCS4A01G272500.1	Wheat	plastid	42.79	43.18
TraesCS4B01G041600.1	Wheat	plastid	42.94	42.94
EER92515	Sorghum	cytosol, plastid	38.74	42.72
HORVU4Hr1G006660.1	Barley	plastid	41.89	42.15
Os03t0703400-01	Rice	plasma membrane	41.14	41.9
KRH10458	Soybean	cytosol	28.98	40.89
Zm00001d028514_P002	Maize	plastid	37.84	38.59
Zm00001d047875_P003	Maize	plastid	36.94	38.26
HORVU4Hr1G061550.1	Barley	cytosol, plastid	39.34	37.92
PGSC0003DMT400083928	Potato	cytosol	10.51	34.83
KXG20217	Sorghum	cytosol	32.88	33.54
PGSC0003DMT400063858	Potato	cytosol	20.87	33.49
PGSC0003DMT400044025	Potato	mitochondrion	13.06	28.9
PGSC0003DMT400044024	Potato	mitochondrion	13.06	28.9
PGSC0003DMT400090976	Potato	mitochondrion	14.56	28.78
PGSC0003DMT400038864	Potato	extracellular	14.41	28.57
PGSC0003DMT400052710	Potato	mitochondrion, plastid	13.36	28.16
PGSC0003DMT400038863	Potato	cytosol, mitochondrion, plastid	14.11	28.14
PGSC0003DMT400090575	Potato	cytosol	13.81	28.13
PGSC0003DMT400068616	Potato	cytosol, mitochondrion	7.21	27.91
PGSC0003DMT400052693	Potato	cytosol	13.81	27.88
PGSC0003DMT400052743	Potato	cytosol	13.81	27.88
PGSC0003DMT400038860	Potato	cytosol	13.96	27.84
PGSC0003DMT400064172	Potato	cytosol	14.71	27.61
PGSC0003DMT400067198	Potato	mitochondrion	12.61	26.84
PGSC0003DMT400024024	Potato	cytosol	6.46	26.71
PGSC0003DMT400038374	Potato	cytosol, mitochondrion, plasma membrane, plastid	11.26	26.69
PGSC0003DMT400067115	Potato	mitochondrion	11.56	26.55
PGSC0003DMT400052702	Potato	mitochondrion	13.51	26.47
PGSC0003DMT400073788	Potato	nucleus	24.32	26.38
PGSC0003DMT400090653	Potato	cytosol	11.11	26.33
PGSC0003DMT400065492	Potato	nucleus	13.96	26.12
PGSC0003DMT400010340	Potato	nucleus	13.81	25.56
PGSC0003DMT400090482	Potato	extracellular, mitochondrion, plasma membrane, plastid	6.91	25.41
PGSC0003DMT400038861	Potato	plastid	14.41	25.33
PGSC0003DMT400010342	Potato	cytosol, plastid	13.66	25.28
PGSC0003DMT400067126	Potato	mitochondrion	13.36	24.93
PGSC0003DMT400075969	Potato	golgi, mitochondrion	12.16	24.92
PGSC0003DMT400010341	Potato	cytosol	13.06	24.44
PGSC0003DMT400072002	Potato	mitochondrion	12.61	24.14
PGSC0003DMT400036857	Potato	mitochondrion	14.26	23.46
PGSC0003DMT400092406	Potato	cytosol	12.16	23.14
PGSC0003DMT400024020	Potato	cytosol	9.91	23.0
PGSC0003DMT400001980	Potato	nucleus, plastid	21.47	22.73
PGSC0003DMT400073303	Potato	nucleus	14.26	21.99
PGSC0003DMT400088687	Potato	cytosol	6.61	21.89
PGSC0003DMT400026093	Potato	nucleus, plastid	21.02	21.84
PGSC0003DMT400039936	Potato	plastid	22.22	21.64
PGSC0003DMT400057171	Potato	plastid	14.26	20.7
PGSC0003DMT400020760	Potato	plastid	21.77	20.45
PGSC0003DMT400031805	Potato	cytosol	26.28	20.02
PGSC0003DMT400067129	Potato	mitochondrion	7.21	19.59
PGSC0003DMT400023236	Potato	cytosol	19.82	19.19
PGSC0003DMT400040869	Potato	cytosol	25.38	18.99
PGSC0003DMT400076066	Potato	mitochondrion	6.01	17.09
PGSC0003DMT400092021	Potato	cytosol	4.5	15.15
PGSC0003DMT400019785	Potato	plastid	0.6	0.59

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102593900	MapMan:18.4.2.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1C6W8	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400023742	PGSC:PGSC0003DMG400023742	EnsemblPlants:PGSC0003DMT400061014
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF409	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002960933	RefSeq:XP_006349414.1
SEG:seg	:	:	:	:	:

Description

Mitogen-activated protein kinase kinase kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400023742]

Coordinates

chr1:-:81272450..81279530

Molecular Weight (calculated)

73774.7 Da

IEP (calculated)

4.750

GRAVY (calculated)

-0.578

Length

666 amino acids

Sequence
(BLAST)

001: MYAKQKKLRP RLDRTNALKN VDYDASQSVP SSPSSLRDPP AHRTRSLDLY PVPDRTSFRI DGSAGEFDTI CRSLGLSLED FAIPVAAWEA RKPCSRSDRL
101: RSTRFSDDSR DSDIKLEDAN ELSDSVRTAA RVTVDAESNS RLNNLPENVI EVTISESDVE TECSHSDCFG SEDELETADE VRNGVRGIVG GKLKHLLYSS
201: PENLIKVRVS ESEDDNLPTD VKCGIKGFRP PRLAPPATDV EDFTSAWDFI KSFGPADDED MVSPLPDEST SDDILVNEQV EEIAKNEERR EDFVRNASQV
301: SESSSEISTD RDNDSSVLRT ENDGACEKPF EQGVRDAAES SKSPSDDSYS LISKTSSKSP TGESDDVISE MSSKSLSGDS YALILKPVHS VSPNGSPSIK
401: SWQKGDFLGS GSFGTVYEGF TDDGFFFAVK EVSLIDPGNQ QSLFQLEQEI SLLSRFRHRN IVRYHGTNKD ESKLYIFLEL VTKGSLASVY RKYRLRDSHV
501: SDYTRQILSG LHYLHSREVM HRDIKCANIL VDANGSVKLA DFGLAKATQL NNIKSCKGTA FWMAPEVVNR KSNGYGTPAD IWSLGCTVLE MLTRQIPYSH
601: LEGMQALFRI GRGEPPPIPD TLSTEAQDFI KSCLRVNPND RPTAAELLEH PFVMKPPSNF SGPLAP

Best Arabidopsis Sequence Match ( AT4G08500.1 )
(BLAST)

001: MDRILARMKK STGRRGGDKN ITPVRRLERR DAARNINYDA ASCSSSSAED LSVSTSSLMT RSLEFPEPTS FRIGGGVGEM DRIYRSLGVS GPDDLAISFD
101: AWEACKKRSS SDVVNRFKSF DLDKVRDQDL SEEGPSGVVV GSDSMNHKVQ GQDLSEAGPS GGIVTELSEI GNLITPVDRL VADGVVENRR VMERTPTIVK
201: SKGYLVPNNV VAVGVGVGGG IKGLRPPVLK PPPAMKRPPI DHRGSSWDFL THFAPSETVK RPSSSSSSSE DGCDEEEGKE EEAEAEEMGA RFIQLGDTAD
301: ETCSFTTNEG DSSSTVSNTS PIYPDGGAII TSWQKGQLLG RGSFGSVYEG ISGDGDFFAV KEVSLLDQGS QAQECIQQLE GEIKLLSQLQ HQNIVRYRGT
401: AKDGSNLYIF LELVTQGSLL KLYQRYQLRD SVVSLYTRQI LDGLKYLHDK GFIHRDIKCA NILVDANGAV KLADFGLAKV SKFNDIKSCK GTPFWMAPEV
501: INRKDSDGYG SPADIWSLGC TVLEMCTGQI PYSDLEPVQA LFRIGRGTLP EVPDTLSLDA RLFILKCLKV NPEERPTAAE LLNHPFVRRP LPSVGSGGSG
601: SASPLLRR

Arabidopsis Description

MEKK1Mitogen-activated protein kinase kinase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39008]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.