Factsheet for VIT_18s0001g03960.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0142g00700.t01	Wine grape	cytosol	30.34	65.15
KRH10459	Soybean	cytosol	47.8	61.59
VIT_12s0034g00750.t01	Wine grape	cytosol	32.63	59.11
OQU91136	Sorghum	cytosol	37.21	56.87
VIT_12s0034g00240.t01	Wine grape	nucleus	41.8	56.16
KRH42244	Soybean	cytosol	46.21	55.74
KRH58364	Soybean	cytosol, plastid	46.38	52.6
GSMUA_Achr11P...	Banana	cytosol	49.74	51.74
GSMUA_Achr7P11850_001	Banana	mitochondrion, nucleus	48.85	50.0
GSMUA_Achr10P...	Banana	cytosol	45.86	49.52
TraesCS6A01G327500.1	Wheat	mitochondrion	35.98	48.8
GSMUA_Achr1P12210_001	Banana	mitochondrion	48.85	47.92
Os03t0262200-00	Rice	cytosol, plastid	49.21	46.73
GSMUA_Achr2P07690_001	Banana	nucleus	47.44	46.38
GSMUA_Achr10P...	Banana	cytosol	45.86	46.02
Zm00001d033655_P003	Maize	nucleus, plastid	49.21	45.89
TraesCS4D01G217000.1	Wheat	plastid	47.62	45.61
EER92515	Sorghum	cytosol, plastid	48.5	45.53
TraesCS4B01G216700.1	Wheat	cytosol, plastid	47.44	45.52
Zm00001d013477_P008	Maize	plastid	48.85	45.19
PGSC0003DMT400061014	Potato	mitochondrion	52.91	45.05
TraesCS4A01G087700.1	Wheat	cytosol, plastid	47.44	44.91
TraesCS4D01G038900.1	Wheat	plastid	50.79	44.86
Solyc01g104530.2.1	Tomato	nucleus	52.38	44.66
TraesCS6B01G358800.1	Wheat	cytosol	41.09	44.55
OQU85800	Sorghum	mitochondrion	40.56	44.32
KRH10458	Soybean	cytosol	36.86	44.28
Os03t0703400-01	Rice	plasma membrane	50.97	44.19
TraesCS6D01G307100.1	Wheat	cytosol	40.56	43.98
HORVU6Hr1G079810.1	Barley	mitochondrion	40.56	43.56
HORVU4Hr1G006660.1	Barley	plastid	50.79	43.5
TraesCS4A01G272500.1	Wheat	plastid	50.62	43.48
TraesCS4B01G041600.1	Wheat	plastid	50.79	43.24
Zm00001d052147_P001	Maize	cytosol	40.04	43.24
Zm00001d028514_P002	Maize	plastid	47.62	41.35
Zm00001d047875_P003	Maize	plastid	45.86	40.44
HORVU4Hr1G061550.1	Barley	cytosol, plastid	47.62	39.07
VIT_02s0025g03850.t01	Wine grape	plastid	15.87	36.89
KXG20217	Sorghum	cytosol	39.51	34.3
VIT_12s0035g01230.t01	Wine grape	nucleus	18.17	28.37
VIT_12s0034g02540.t01	Wine grape	cytosol	16.23	27.96
VIT_10s0116g01230.t01	Wine grape	plastid	17.64	26.67
VIT_04s0044g01290.t01	Wine grape	nucleus	28.22	25.68
VIT_00s1194g00010.t01	Wine grape	plastid	21.69	25.36
VIT_12s0059g00870.t01	Wine grape	plastid	18.69	25.24
VIT_07s0031g00530.t01	Wine grape	mitochondrion	16.05	24.66
VIT_07s0130g00300.t01	Wine grape	nucleus	16.4	24.28
VIT_18s0001g11240.t01	Wine grape	cytosol	22.22	24.23
VIT_12s0035g00210.t01	Wine grape	cytosol	9.7	22.27
VIT_00s0567g00010.t01	Wine grape	plastid	26.45	21.22
VIT_19s0090g00820.t01	Wine grape	plastid	17.46	21.06
VIT_02s0025g03370.t01	Wine grape	cytosol	32.63	20.53
VIT_16s0050g00770.t01	Wine grape	cytosol	32.1	20.4
VIT_14s0128g00430.t01	Wine grape	cytosol	23.63	20.0
VIT_05s0020g02910.t01	Wine grape	nucleus	24.16	19.97
VIT_06s0004g06850.t01	Wine grape	cytosol	16.58	18.76
VIT_10s0116g01240.t01	Wine grape	plastid	17.64	12.58
VIT_01s0011g02270.t01	Wine grape	cytosol	21.34	8.61

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100264291	wikigene:100264291	MapMan:18.4.2.2	Gene3D:3.30.200.20	ProteinID:CCB45525
ProteinID:CCB45525.1	UniProt:F6H0M8	EMBL:FN595227	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049
GO:GO:0007154	GO:GO:0007165	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100264291	wikigene:LOC100264291	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF627	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00019854B1	ArrayExpress:VIT_18s0001g03960	EnsemblPlantsGene:VIT_18s0001g03960
EnsemblPlants:VIT_18s0001g03960.t01	RefSeq:XP_002284356	RefSeq:XP_002284356.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr18:-:3596240..3606771

Molecular Weight (calculated)

61876.4 Da

IEP (calculated)

5.385

GRAVY (calculated)

-0.450

Length

567 amino acids

Sequence
(BLAST)

001: MHHLPRLFDY SKRSKGMFPK QKPRKPKLER RNALRHIDYD ASASSSSSSF DDSLALHTQS LDLSDRSSFR IHGTEGEVDE ICRSLGLSGP DELSIPEAAW
101: EAWKVRSNSD VLPRTRFNRL HSSKRKESEV KVDDGVVDDL ADGFEDSVSC SDAIGRRRET SELSSSRIVG GVGGCGGGIK GVRPPFLSPP PLMSLPVISD
201: GCSTWDILKS FGPDADGGSS VVVEGGSSSE DDEFDAALVK GEDVNGLRND EIALLSESYS FTTTSNDDDS SSTTTEPMSN ISPNGSLRPS FTNWMKGAFL
301: GSGSFGTVYE GMSEDGIFFA VKEVSLLDQG SQGKQSLYQL EQEIDLLSQF QHENIVQYHG TAKDESKLYI FLELVTKGSL ASLYQRYNLG DSQASAYTRQ
401: ILHGLNYLHE RNVIHRDIKC ANILVGANGS VKLSDFGLAK ATQLNDAKSC KGTPFWMAPE VVNGKGQGYG LAADIWSLGC TVLEMLTREV PYSHLESMQA
501: LFRIGKGEPP PVPDSLSPDA RDFILKCLQV IPDDRPTAAQ LLNHQFVKRP PPTSSGSASP LYHGRRS

Best Arabidopsis Sequence Match ( AT4G08500.1 )
(BLAST)

001: MDRILARMKK STGRRGGDKN ITPVRRLERR DAARNINYDA ASCSSSSAED LSVSTSSLMT RSLEFPEPTS FRIGGGVGEM DRIYRSLGVS GPDDLAISFD
101: AWEACKKRSS SDVVNRFKSF DLDKVRDQDL SEEGPSGVVV GSDSMNHKVQ GQDLSEAGPS GGIVTELSEI GNLITPVDRL VADGVVENRR VMERTPTIVK
201: SKGYLVPNNV VAVGVGVGGG IKGLRPPVLK PPPAMKRPPI DHRGSSWDFL THFAPSETVK RPSSSSSSSE DGCDEEEGKE EEAEAEEMGA RFIQLGDTAD
301: ETCSFTTNEG DSSSTVSNTS PIYPDGGAII TSWQKGQLLG RGSFGSVYEG ISGDGDFFAV KEVSLLDQGS QAQECIQQLE GEIKLLSQLQ HQNIVRYRGT
401: AKDGSNLYIF LELVTQGSLL KLYQRYQLRD SVVSLYTRQI LDGLKYLHDK GFIHRDIKCA NILVDANGAV KLADFGLAKV SKFNDIKSCK GTPFWMAPEV
501: INRKDSDGYG SPADIWSLGC TVLEMCTGQI PYSDLEPVQA LFRIGRGTLP EVPDTLSLDA RLFILKCLKV NPEERPTAAE LLNHPFVRRP LPSVGSGGSG
601: SASPLLRR

Arabidopsis Description

MEKK1Mitogen-activated protein kinase kinase kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39008]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.