Factsheet for VIT_04s0044g01290.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64042	Soybean	nucleus	65.97	68.39
KRH43554	Soybean	nucleus	64.85	67.79
KRH59572	Soybean	nucleus	64.85	67.33
KRH53896	Soybean	nucleus	65.97	66.72
PGSC0003DMT400073788	Potato	nucleus	65.17	66.12
Solyc11g006000.1.1	Tomato	nucleus	65.01	65.96
CDX89612	Canola	nucleus	56.5	60.79
Bra013139.1-P	Field mustard	nucleus	57.14	60.14
CDX93120	Canola	nucleus	57.14	60.03
AT1G53570.1	Thale cress	cytosol	58.59	59.93
VIT_02s0025g03850.t01	Wine grape	plastid	21.51	54.92
Os11t0207200-01	Rice	cytosol, plasma membrane	46.23	51.99
GSMUA_Achr6P25760_001	Banana	cytosol	44.46	51.87
HORVU4Hr1G017100.3	Barley	cytosol, mitochondrion, nucleus	52.81	49.55
TraesCS4A01G211600.1	Wheat	cytosol	52.49	49.4
TraesCS4B01G104900.1	Wheat	cytosol, mitochondrion, nucleus	52.49	49.32
TraesCS4D01G101800.3	Wheat	cytosol, mitochondrion, nucleus	52.49	49.32
KXG28265	Sorghum	mitochondrion	51.69	48.2
Zm00001d049080_P001	Maize	mitochondrion	52.01	47.86
VIT_12s0142g00700.t01	Wine grape	cytosol	19.58	46.21
GSMUA_Achr9P08460_001	Banana	cytosol, plasma membrane, plastid	38.84	45.49
OQU85116	Sorghum	cytosol	38.52	43.4
GSMUA_Achr6P17610_001	Banana	nucleus	51.2	42.48
Os04t0437600-01	Rice	plasma membrane	46.07	40.54
TraesCS2B01G323700.2	Wheat	mitochondrion	44.78	40.49
TraesCS2A01G307100.1	Wheat	mitochondrion	44.3	40.17
TraesCS2D01G305500.1	Wheat	mitochondrion	44.14	39.91
VIT_12s0034g00750.t01	Wine grape	cytosol	19.58	38.98
OQU81618	Sorghum	mitochondrion	45.75	38.57
Zm00001d025449_P002	Maize	mitochondrion, plastid	44.46	37.38
VIT_00s1194g00010.t01	Wine grape	plastid	28.89	37.11
HORVU2Hr1G076510.2	Barley	cytosol	44.62	36.92
Zm00001d016807_P001	Maize	mitochondrion	41.57	35.53
Os02t0555900-00	Rice	plasma membrane	40.13	34.87
VIT_18s0001g11240.t01	Wine grape	cytosol	26.97	32.31
VIT_02s0025g03370.t01	Wine grape	cytosol	46.39	32.08
VIT_16s0050g00770.t01	Wine grape	cytosol	45.59	31.84
VIT_12s0034g00240.t01	Wine grape	nucleus	21.51	31.75
VIT_12s0034g02540.t01	Wine grape	cytosol	16.69	31.61
VIT_12s0035g01230.t01	Wine grape	nucleus	17.66	30.3
VIT_00s0567g00010.t01	Wine grape	plastid	33.71	29.7
VIT_10s0116g01230.t01	Wine grape	plastid	17.18	28.53
VIT_18s0001g03960.t01	Wine grape	mitochondrion, nucleus	25.68	28.22
VIT_07s0031g00530.t01	Wine grape	mitochondrion	16.37	27.64
VIT_12s0059g00870.t01	Wine grape	plastid	18.62	27.62
VIT_12s0035g00210.t01	Wine grape	cytosol	10.43	26.32
VIT_14s0128g00430.t01	Wine grape	cytosol	25.84	24.03
VIT_07s0130g00300.t01	Wine grape	nucleus	14.77	24.02
VIT_05s0020g02910.t01	Wine grape	nucleus	25.52	23.18
VIT_19s0090g00820.t01	Wine grape	plastid	17.34	22.98
VIT_06s0004g06850.t01	Wine grape	cytosol	16.69	20.76
VIT_10s0116g01240.t01	Wine grape	plastid	17.18	13.46
VIT_01s0011g02270.t01	Wine grape	cytosol	22.79	10.11

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100243772	wikigene:100243772	MapMan:18.4.2.2	ProteinID:CCB60412	ProteinID:CCB60412.1
UniProt:F6I0E6	EMBL:FN596506	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007154
GO:GO:0007165	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100243772	wikigene:LOC100243772	PFAM:PF00069	ScanProsite:PS00107	PFscan:PS50011
PANTHER:PTHR24361	PANTHER:PTHR24361:SF337	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
TIGR:TC69872	UniParc:UPI0001983274	ArrayExpress:VIT_04s0044g01290	EnsemblPlantsGene:VIT_04s0044g01290	EnsemblPlants:VIT_04s0044g01290.t01	unigene:Vvi.2278
RefSeq:XP_002280682	RefSeq:XP_002280682.1	RefSeq:XP_003631914	RefSeq:XP_003631914.1	SEG:seg	:

Description

No Description!

Coordinates

chr4:+:22814326..22820168

Molecular Weight (calculated)

67700.3 Da

IEP (calculated)

9.188

GRAVY (calculated)

-0.578

Length

623 amino acids

Sequence
(BLAST)

001: MPAWWGRKSS KCKEEVQQQN PESTLYNISK ISIRNDKKNG KDKPKSFDEG LFSRNSPRSS KDYGALTVSG GGGSSGFSGF DSDCGDKIRG HPLPLPSAGI
101: EHGVGSGSGS VSSVSSSGSS DDHPSPHDHA PFGVYRGQGE TKSNTRSRSP GPGSRSATSP LHPRFSTSNI DSLTGKQEEG RSCHRLPLPP GSPTSPSTLS
201: STRTCVVTES TTCNMSKWKK GRLLGRGTFG HVYVGFNSEN GQMCAIKEVK VVSDDHTSKE CLKQLNQEIN LLSQLSHPNI VQYYGSEMGE ETLSVYLEYV
301: SGGSIHKLLQ EYGPFKEPVI QNYARQIISG LAYLHGRSTV HRDIKGANIL VGPNGEIKLA DFGMAKHINS SSSMLSFKGS PYWMAPEVVM NTNGYSLAVD
401: IWSLGCTILE MATSKPPWSQ YEGVAAIFKI GNSRDVPEIP DHLSNDAKSF VRLCLQRDPS ARPTALQLLD HSFVRDQATT RIANIAITKD AFPSTFDGSR
501: TPTALELHSN RTSLTLFDGD YVTKPVGTVS RAAKNSRDSV RTITSLPVSP CSSPLRNYGP AHKSCFLSPP HPSYPIVGQS SYNSNDYSLY PTRAITKYTH
601: DPWSDNPPFR SLTPNGSPRT RPI

Best Arabidopsis Sequence Match ( AT1G53570.4 )
(BLAST)

001: MPTWWGRKSC KNKDDNHRGI ISTDRDIKSS AVVVDPPLTP TRGGTPRCSR EFAGASSAFS GFDSDSTEKK GHPLPRPLLS PVSIHHQDHV SGSTSGSTSV
101: SSVSSSGSAD DQSQLVASRG RGDVKFNVAA APRSPERVSP KAATITTRPT SPRHQRLSGV VSLESSTGRN DDGRSSSECH PLPRPPTSPT SPSAVHGSRI
201: GGGYETSPSG FSTWKKGKFL GSGTFGQVYL GFNSEKGKMC AIKEVKVISD DQTSKECLKQ LNQEINLLNQ LCHPNIVQYY GSELSEETLS VYLEYVSGGS
301: IHKLLKDYGS FTEPVIQNYT RQILAGLAYL HGRNTVHRDI KGANILVDPN GEIKLADFGM AKHVTAFSTM LSFKGSPYWM APEVVMSQNG YTHAVDIWSL
401: GCTILEMATS KPPWSQFEGV AAIFKIGNSK DTPEIPDHLS NDAKNFIRLC LQRNPTVRPT ASQLLEHPFL RNTTRVASTS LPKDFPPRSY DGNFSLQPTR
501: EPYPGRLSHD NYAKQPLSRT IKSPRENVRA ITSLPVSPCS SPLRQLGPAY KSCFLSPPHP SYAFPGQDSG YNLAEFAASP FRMKKDAMME PSSFRTQTPN
601: SPLRSRLV

Arabidopsis Description

MAPKKK3Mitogen-activated protein kinase kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HRJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.