CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64042	Soybean	nucleus	90.75	93.01
KRH43554	Soybean	nucleus	71.1	73.49
KRH59572	Soybean	nucleus	71.1	73.0
VIT_04s0044g01290.t01	Wine grape	nucleus	66.72	65.97
PGSC0003DMT400073788	Potato	nucleus	60.55	60.75
Solyc11g006000.1.1	Tomato	nucleus	59.9	60.1
AT1G53570.1	Thale cress	cytosol	58.12	58.78
CDX89612	Canola	nucleus	54.87	58.38
Bra013139.1-P	Field mustard	nucleus	55.68	57.94
CDX93120	Canola	nucleus	55.68	57.84
Os11t0207200-01	Rice	cytosol, plasma membrane	47.56	52.89
GSMUA_Achr6P25760_001	Banana	cytosol	43.99	50.75
HORVU4Hr1G017100.3	Barley	cytosol, mitochondrion, nucleus	51.95	48.19
TraesCS4B01G104900.1	Wheat	cytosol, mitochondrion, nucleus	51.62	47.96
TraesCS4A01G211600.1	Wheat	cytosol	51.46	47.89
TraesCS4D01G101800.3	Wheat	cytosol, mitochondrion, nucleus	51.46	47.81
KXG28265	Sorghum	mitochondrion	50.97	47.01
Zm00001d049080_P001	Maize	mitochondrion	50.49	45.94
OQU85116	Sorghum	cytosol	38.8	43.22
GSMUA_Achr9P08460_001	Banana	cytosol, plasma membrane, plastid	37.18	43.05
GSMUA_Achr6P17610_001	Banana	nucleus	50.65	41.54
Os04t0437600-01	Rice	plasma membrane	47.08	40.96
TraesCS2B01G323700.2	Wheat	mitochondrion	45.13	40.35
TraesCS2D01G305500.1	Wheat	mitochondrion	44.81	40.06
TraesCS2A01G307100.1	Wheat	mitochondrion	44.64	40.03
OQU81618	Sorghum	mitochondrion	46.43	38.7
Zm00001d025449_P002	Maize	mitochondrion, plastid	44.97	37.38
HORVU2Hr1G076510.2	Barley	cytosol	44.97	36.79
Zm00001d016807_P001	Maize	mitochondrion	42.21	35.67
KRH28449	Soybean	plastid	15.26	35.47
Os02t0555900-00	Rice	plasma membrane	41.07	35.29
KRH10459	Soybean	cytosol	24.35	34.09
KRH26278	Soybean	cytosol	17.37	32.52
KRH06039	Soybean	cytosol	17.21	31.55
KRH28506	Soybean	plastid	31.49	31.14
KRH57939	Soybean	nucleus	17.21	31.09
KRH05734	Soybean	cytosol, plastid	28.41	30.81
KRH04602	Soybean	nucleus	17.05	30.79
KRH42244	Soybean	cytosol	23.38	30.64
KRH74789	Soybean	nucleus	16.23	30.49
KRH58364	Soybean	cytosol, plastid	24.68	30.4
KRH35266	Soybean	nucleus	43.67	30.33
KRH27916	Soybean	cytosol, plastid	41.4	30.21
KRH38416	Soybean	cytosol, plastid	43.99	30.21
KRH25356	Soybean	cytosol	17.21	30.11
KRG91565	Soybean	cytosol	43.34	30.07
KRH08892	Soybean	cytosol	43.83	30.07
KRH77009	Soybean	nucleus	16.88	30.06
KRH77558	Soybean	cytosol, plastid	42.37	30.03
KRH76953	Soybean	plastid	30.68	29.86
KRH04666	Soybean	plastid	30.84	29.83
KRH55299	Soybean	mitochondrion	11.85	29.55
KRH57740	Soybean	plastid	30.36	29.5
KRH28462	Soybean	plastid	16.4	29.19
KRH66431	Soybean	plastid	16.4	29.02
KRH00952	Soybean	cytosol	13.64	28.97
KRH66433	Soybean	cytosol, plastid	15.91	28.32
KRH53173	Soybean	nucleus	25.49	28.29
KRH55302	Soybean	plasma membrane, plastid	13.47	28.14
KRH55037	Soybean	plasma membrane	13.64	28.0
KRH64744	Soybean	nucleus	25.65	27.92
KRH51939	Soybean	mitochondrion, plastid	30.36	27.87
KRH56159	Soybean	cytosol, mitochondrion, plastid	17.37	27.79
KRH61238	Soybean	cytosol, plastid	29.06	27.33
KRH22583	Soybean	plastid	17.53	27.14
KRH26765	Soybean	mitochondrion	17.21	26.77
KRH16614	Soybean	mitochondrion	23.86	26.58
KRH16616	Soybean	nucleus	25.0	26.1
KRH10458	Soybean	cytosol	19.97	26.06
KRH15298	Soybean	cytosol	29.22	25.64
KRH18819	Soybean	nucleus	24.68	25.59
KRG96833	Soybean	cytosol	26.95	25.23
KRH68552	Soybean	cytosol	26.95	25.08
KRH36483	Soybean	cytosol, mitochondrion, plasma membrane, plastid	16.88	24.64
KRG98260	Soybean	mitochondrion	15.42	24.55
KRH35566	Soybean	nucleus	24.84	24.52
KRH41200	Soybean	cytosol	41.23	24.47
KRH30249	Soybean	mitochondrion	15.91	23.84
KRG91247	Soybean	nucleus	24.19	23.76
KRH72707	Soybean	mitochondrion	16.07	21.24
KRH17058	Soybean	cytosol, golgi, mitochondrion, nucleus, plastid	15.75	19.92
KRH24194	Soybean	cytosol	22.08	9.86
KRH29165	Soybean	cytosol	22.24	9.84

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100813122	MapMan:18.4.2.2	EMBL:ACUP02003488	EnsemblPlantsGene:GLYMA_06G153200	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0006950	GO:GO:0007049	GO:GO:0007154	GO:GO:0007165	GO:GO:0007346	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014
GO:GO:0031098	GO:GO:0032147	UniProt:I1KBJ1	InterPro:IPR000719	EnsemblPlants:KRH53896	ProteinID:KRH53896
ProteinID:KRH53896.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF337	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	UniParc:UPI000233A2DF
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:12517111..12523088

Molecular Weight (calculated)

67213.0 Da

IEP (calculated)

9.201

GRAVY (calculated)

-0.581

Length

616 amino acids

Sequence
(BLAST)

001: MPTWWGKKSS KSKDQQPQED HHHPPHGGGG GAATSVLNFN FNKLNKPRPD RPSKSFDDVV RNSPRCSRDF SSSAAAAVDQ GLPLPRPSVS STQSFGIEQG
101: LVFGSGSVSG SSVSSSGSYD DHPTCHSQIN ASRGQGDTKF YARSKSPGPG SRGPTSPTSP LHPKLHVLSL DSPTGRQEGE CHPLPLPPGS PTSPSSSLPS
201: TRANGMTEHT TGNLSKWKKG KLLGRGTFGH VYLGFNSDSG QLCAIKEVRV VCDDQSSKEC LKQLNQEIHL LSQLSHPNIV QYYGSDLGEE TLSVYLEYVS
301: GGSIHKLLQE YGAFKEPVIQ NYTRQIVSGL SYLHGRNTVH RDIKGANILV DPNGEIKLAD FGMAKHINSS SSMLSFKGSP YWMAPEVVMN TNGYSLPVDI
401: WSLGCTILEM ATSKPPWNQY EGVAAIFKIG NSRDMPEIPD HLSSEAKNFI QLCLQRDPSA RPTAQKLIEH PFIRDQSATK ATNVRITRDA FPYMFDGSRT
501: PPPVLDHSNR TSLTSFDGDY ATKPIPVTSR TVRSPRDNTR MITSLPVSPC SSPLRQYGPA HKSCFLSPPH PTYTLMGQNT LPSYPVRSNA TFTLDPFHET
601: AFYKAHTPGG SPRRLI

Best Arabidopsis Sequence Match ( AT1G53570.4 )
(BLAST)

001: MPTWWGRKSC KNKDDNHRGI ISTDRDIKSS AVVVDPPLTP TRGGTPRCSR EFAGASSAFS GFDSDSTEKK GHPLPRPLLS PVSIHHQDHV SGSTSGSTSV
101: SSVSSSGSAD DQSQLVASRG RGDVKFNVAA APRSPERVSP KAATITTRPT SPRHQRLSGV VSLESSTGRN DDGRSSSECH PLPRPPTSPT SPSAVHGSRI
201: GGGYETSPSG FSTWKKGKFL GSGTFGQVYL GFNSEKGKMC AIKEVKVISD DQTSKECLKQ LNQEINLLNQ LCHPNIVQYY GSELSEETLS VYLEYVSGGS
301: IHKLLKDYGS FTEPVIQNYT RQILAGLAYL HGRNTVHRDI KGANILVDPN GEIKLADFGM AKHVTAFSTM LSFKGSPYWM APEVVMSQNG YTHAVDIWSL
401: GCTILEMATS KPPWSQFEGV AAIFKIGNSK DTPEIPDHLS NDAKNFIRLC LQRNPTVRPT ASQLLEHPFL RNTTRVASTS LPKDFPPRSY DGNFSLQPTR
501: EPYPGRLSHD NYAKQPLSRT IKSPRENVRA ITSLPVSPCS SPLRQLGPAY KSCFLSPPHP SYAFPGQDSG YNLAEFAASP FRMKKDAMME PSSFRTQTPN
601: SPLRSRLV

Arabidopsis Description

MAPKKK3Mitogen-activated protein kinase kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:F4HRJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.