CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 4
plasma membrane 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH00834
KRH06592
KRH40392
KRH41300
KRH48074
KRH60029
KRH77637

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G08480.1	KRH00834	AT4G01370.1	22643122
AT4G08480.1	KRH06592	AT4G01370.1	22643122
AT4G08480.1	KRH40392	AT4G01370.1	22643122
AT4G08480.1	KRH48074	AT4G01370.1	22643122
AT4G08500.1	KRH41300	AT4G23810.1	17587183
AT4G08500.1	KRH60029	AT4G23810.1	17587183
AT4G08500.1	KRH77637	AT4G23810.1	17587183

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16616	Soybean	nucleus	87.7	82.2
KRH18819	Soybean	nucleus	82.1	76.43
PGSC0003DMT400067237	Potato	cytosol	38.52	73.2
KRH53173	Soybean	nucleus	65.64	65.41
Bra039693.1-P	Field mustard	cytosol	32.01	64.6
KRH64744	Soybean	nucleus	65.82	64.31
VIT_12s0142g00700.t01	Wine grape	cytosol	28.93	60.61
OQU91136	Sorghum	cytosol	39.6	59.03
CDY36607	Canola	cytosol	34.72	58.36
CDY18020	Canola	cytosol	8.14	57.69
CDY24072	Canola	cytosol	36.71	57.02
KRH10459	Soybean	cytosol	44.85	56.36
VIT_12s0034g00750.t01	Wine grape	cytosol	30.92	54.63
KRH42244	Soybean	cytosol	44.48	52.34
VIT_12s0034g00240.t01	Wine grape	nucleus	39.6	51.9
KRH58364	Soybean	cytosol, plastid	44.67	49.4
GSMUA_Achr10P...	Banana	cytosol	46.65	49.14
GSMUA_Achr11P...	Banana	cytosol	47.56	48.26
Solyc07g053170.2.1	Tomato	cytosol	52.08	47.92
Bra000647.1-P	Field mustard	cytosol	46.29	47.32
CDY36198	Canola	cytosol	49.01	47.13
CDY34000	Canola	cytosol	46.65	46.91
GSMUA_Achr7P11850_001	Banana	mitochondrion, nucleus	46.84	46.75
TraesCS6A01G327500.1	Wheat	mitochondrion	35.26	46.65
CDY69517	Canola	cytosol	46.29	46.63
AT4G08500.1	Thale cress	cytosol, mitochondrion	51.18	46.55
CDX75154	Canola	cytosol	49.91	45.62
GSMUA_Achr1P12210_001	Banana	mitochondrion	47.56	45.5
Bra037860.1-P	Field mustard	cytosol	49.01	45.24
Zm00001d033655_P003	Maize	nucleus, plastid	49.19	44.74
GSMUA_Achr2P07690_001	Banana	nucleus	46.84	44.66
Os03t0262200-00	Rice	cytosol, plastid	47.92	44.39
EER92515	Sorghum	cytosol, plastid	48.1	44.04
TraesCS4D01G217000.1	Wheat	plastid	47.02	43.92
Zm00001d013477_P008	Maize	plastid	48.46	43.72
TraesCS4B01G216700.1	Wheat	cytosol, plastid	46.29	43.32
TraesCS4D01G038900.1	Wheat	plastid	50.27	43.3
TraesCS4A01G087700.1	Wheat	cytosol, plastid	46.84	43.24
HORVU4Hr1G006660.1	Barley	plastid	50.81	42.45
Os03t0703400-01	Rice	plasma membrane	50.09	42.35
GSMUA_Achr10P...	Banana	cytosol	43.22	42.3
TraesCS4A01G272500.1	Wheat	plastid	50.27	42.12
TraesCS4B01G041600.1	Wheat	plastid	50.27	41.74
OQU85800	Sorghum	mitochondrion	39.06	41.62
TraesCS6B01G358800.1	Wheat	cytosol	38.88	41.11
Zm00001d028514_P002	Maize	plastid	48.46	41.04
Zm00001d052147_P001	Maize	cytosol	38.52	40.57
TraesCS6D01G307100.1	Wheat	cytosol	38.34	40.54
HORVU6Hr1G079810.1	Barley	mitochondrion	38.7	40.53
KRH10458	Soybean	cytosol	34.54	40.47
Zm00001d047875_P003	Maize	plastid	45.57	39.19
AT4G08470.1	Thale cress	cytosol	39.06	38.57
HORVU4Hr1G061550.1	Barley	cytosol, plastid	46.11	36.9
AT4G08480.1	Thale cress	cytosol, plastid	46.47	33.25
KRH28449	Soybean	plastid	15.55	32.45
KXG20217	Sorghum	cytosol	38.16	32.31
CDY18021	Canola	nucleus	23.51	31.71
KRH74789	Soybean	nucleus	18.08	30.49
KRH55299	Soybean	mitochondrion	13.56	30.36
KRH26278	Soybean	cytosol	17.9	30.09
KRH06039	Soybean	cytosol	18.26	30.06
KRH28462	Soybean	plastid	18.26	29.19
KRH77009	Soybean	nucleus	18.26	29.19
KRH55302	Soybean	plasma membrane, plastid	15.55	29.15
KRH00952	Soybean	cytosol	15.19	28.97
KRH66431	Soybean	plastid	18.08	28.74
KRH55037	Soybean	plasma membrane	15.55	28.67
KRH25356	Soybean	cytosol	17.36	27.27
KRH57939	Soybean	nucleus	16.64	26.98
KRH04602	Soybean	nucleus	16.46	26.69
KRH66433	Soybean	cytosol, plastid	16.27	26.01
KRH56159	Soybean	cytosol, mitochondrion, plastid	17.72	25.45
KRH26765	Soybean	mitochondrion	17.9	25.0
KRH36483	Soybean	cytosol, mitochondrion, plasma membrane, plastid	18.99	24.88
KRH22583	Soybean	plastid	17.9	24.87
KRH59572	Soybean	nucleus	26.76	24.67
KRH43554	Soybean	nucleus	26.4	24.5
KRH64042	Soybean	nucleus	26.58	24.46
KRH05734	Soybean	cytosol, plastid	24.77	24.12
KRH53896	Soybean	nucleus	26.58	23.86
KRG98260	Soybean	mitochondrion	16.46	23.51
KRH61238	Soybean	cytosol, plastid	26.4	22.29
KRH30249	Soybean	mitochondrion	16.46	22.14
KRH51939	Soybean	mitochondrion, plastid	26.58	21.91
KRH04666	Soybean	plastid	24.05	20.88
KRH57740	Soybean	plastid	23.87	20.82
KRH28506	Soybean	plastid	23.33	20.71
KRH15298	Soybean	cytosol	25.86	20.37
KRH27916	Soybean	cytosol, plastid	30.92	20.26
KRG96833	Soybean	cytosol	23.69	19.91
KRH68552	Soybean	cytosol	23.69	19.79
KRH76953	Soybean	plastid	22.6	19.75
KRH77558	Soybean	cytosol, plastid	30.92	19.68
KRG91247	Soybean	nucleus	21.88	19.3
KRH35566	Soybean	nucleus	21.52	19.07
KRH35266	Soybean	nucleus	29.66	18.49
KRH08892	Soybean	cytosol	30.02	18.49
KRH72707	Soybean	mitochondrion	15.55	18.45
KRH38416	Soybean	cytosol, plastid	29.84	18.39
KRG91565	Soybean	cytosol	29.48	18.36
KRH17058	Soybean	cytosol, golgi, mitochondrion, nucleus, plastid	15.37	17.45
KRH41200	Soybean	cytosol	30.74	16.38
KRH24194	Soybean	cytosol	21.7	8.7
KRH29165	Soybean	cytosol	21.7	8.62

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100798028	MapMan:18.4.2.2	EMBL:ACUP02008961	EMBL:ACUP02008962	ncoils:Coil
EnsemblPlantsGene:GLYMA_14G165700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0004713	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007154
GO:GO:0007165	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0018108	GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147
UniProt:I1MAM7	InterPro:IPR000719	EnsemblPlants:KRH16614	ProteinID:KRH16614	ProteinID:KRH16614.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00109	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF627	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00219	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Tyr_kinase_AS	InterPro:Tyr_kinase_cat_dom	UniParc:UPI000233BB03	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr14:-:40916648..40932983

Molecular Weight (calculated)

61430.5 Da

IEP (calculated)

4.400

GRAVY (calculated)

-0.496

Length

553 amino acids

Sequence
(BLAST)

001: MDLRNLLRRN AAKLFESSSS SSSSTGSSRS LVYTRAMEFY DQADIRFEGV EAELNQLCQS LGLSSIEDFS IPAADWEAIK LRSSLDLLPP PRRPNRGGGG
101: EFDDEVNEKQ KEEIGVLESE DRARVLDECV VPAESSGCCG GSCRIKGFQP LMLTPPPTPG VWVSVVDDAT CSTWDLMRDF APKGEGGGKD SYVELNSSDD
201: EDDHEREEEE EEEEEEEEVG GVRVESVEEE NAATFAEIVG DFSGFSTSNE DDSSGTTTGP RSNNISPNGR IKRVITAGNW QKGELLGRGS FGSVYEGISE
301: DGFFFAVKEV SLLDQGNQGR QSVYQLEQEI ALLSQFEHEN IVQYIGTEMD ASNLYIFIEL VTKGSLRNLY QRYNLRDSQV SAYTRQILHG LKYLHDRNIV
401: HRDIRCANIL VDANGSVKFA DFGLAKEPKF NDVKSWKGTA FFWMAPEVVK RINTGYGLPA DIWSLGCTVL EMLTGQIPYS PLECMQALFR IGRGEPPHVP
501: DSLSRDARDF ILQCLKVDPD ERPSAAQLLN HTFVQRPLHS QSSGSASPYI RRG

Best Arabidopsis Sequence Match ( AT4G08470.1 )
(BLAST)

001: MDVTAIFAGD ILVQSREYLI PNDVVDVDGG IKAVRPPIIQ PPPGRKLPLI DFPGSSWDFL TYFAPSKTVK RQSSSSSDNT SDKEEVETEE TRGMFVQLGD
101: TAHEACPFAT NEADSSSTVS IISPSYASRG SIVPSWLKRK FLGRVSLGFV YEGSSGSSVG SESTCSLMTP SLEFPDRISF RKKDFSEKGP SRHVWEKRKL
201: TRAKLIENFC NPEDIEPVTS WLKGQLLGEE SFASVYEAIS DSSVGSESTC SLMTPSMEFP DRISFRKRDF SEEGPSGRVK EKRKLMRNKL IENFRKPEDI
301: TSWLKGQLLG RGSYASVYEA ISEDGDFFAV KEVSLLDKGI QAQECIQQLE GEIALLSQLQ HQNIVRYRGT AKDVSKLYIF LELVTQGSVQ KLYERYQLSY
401: TVVSLYTRQI LAGLNYLHDK GFVHRDIKCA NMLVDANGTV KLADFGLAEA SKFNDIMSCK GTLFWMAPEV INRKDSDGNG SPADIWSLGC TVLEMCTGQI
501: PYSDLKPIQA AFKIGRGTLP DVPDTLSLDA RHFILTCLKV NPEERPTAAE LLHHPFVINL

Arabidopsis Description

MAPKKK10Mitogen-activated protein kinase kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0T3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.