CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH00834
KRH06592
KRH40392
KRH41300
KRH48074
KRH60029
KRH77637

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G08480.1	KRH00834	AT4G01370.1	22643122
AT4G08480.1	KRH06592	AT4G01370.1	22643122
AT4G08480.1	KRH40392	AT4G01370.1	22643122
AT4G08480.1	KRH48074	AT4G01370.1	22643122
AT4G08500.1	KRH41300	AT4G23810.1	17587183
AT4G08500.1	KRH60029	AT4G23810.1	17587183
AT4G08500.1	KRH77637	AT4G23810.1	17587183

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64744	Soybean	nucleus	90.09	88.34
PGSC0003DMT400067237	Potato	cytosol	37.66	71.82
KRH16616	Soybean	nucleus	70.81	66.61
KRH18819	Soybean	nucleus	70.63	65.99
KRH16614	Soybean	mitochondrion	65.41	65.64
Bra039693.1-P	Field mustard	cytosol	31.35	63.5
VIT_12s0142g00700.t01	Wine grape	cytosol	29.55	62.12
KRH10459	Soybean	cytosol	48.65	61.36
CDY36607	Canola	cytosol	35.5	59.88
VIT_12s0034g00750.t01	Wine grape	cytosol	32.79	58.15
CDY24072	Canola	cytosol	37.3	58.15
OQU91136	Sorghum	cytosol	38.56	57.68
CDY18020	Canola	cytosol	7.93	56.41
KRH42244	Soybean	cytosol	47.75	56.38
VIT_12s0034g00240.t01	Wine grape	nucleus	41.62	54.74
KRH58364	Soybean	cytosol, plastid	48.11	53.4
Bra000647.1-P	Field mustard	cytosol	51.35	52.68
CDY34000	Canola	cytosol	51.53	52.0
CDY69517	Canola	cytosol	51.35	51.91
GSMUA_Achr11P...	Banana	cytosol	50.09	51.01
CDY36198	Canola	cytosol	52.79	50.96
GSMUA_Achr10P...	Banana	cytosol	47.39	50.1
Solyc07g053170.2.1	Tomato	cytosol	54.23	50.08
TraesCS6A01G327500.1	Wheat	mitochondrion	37.48	49.76
Bra037860.1-P	Field mustard	cytosol	52.97	49.08
CDX75154	Canola	cytosol	52.79	48.43
GSMUA_Achr7P11850_001	Banana	mitochondrion, nucleus	48.29	48.38
AT4G08500.1	Thale cress	cytosol, mitochondrion	52.07	47.53
GSMUA_Achr10P...	Banana	cytosol	48.29	47.43
GSMUA_Achr1P12210_001	Banana	mitochondrion	49.37	47.4
Zm00001d052147_P001	Maize	cytosol	44.32	46.86
OQU85800	Sorghum	mitochondrion	43.78	46.82
GSMUA_Achr2P07690_001	Banana	nucleus	48.83	46.72
Zm00001d033655_P003	Maize	nucleus, plastid	50.63	46.22
Os03t0262200-00	Rice	cytosol, plastid	48.83	45.39
Zm00001d013477_P008	Maize	plastid	50.09	45.35
TraesCS6B01G358800.1	Wheat	cytosol	42.7	45.32
EER92515	Sorghum	cytosol, plastid	49.19	45.2
TraesCS4D01G217000.1	Wheat	plastid	48.11	45.1
HORVU6Hr1G079810.1	Barley	mitochondrion	42.7	44.89
TraesCS6D01G307100.1	Wheat	cytosol	42.16	44.74
TraesCS4B01G216700.1	Wheat	cytosol, plastid	47.57	44.67
TraesCS4A01G087700.1	Wheat	cytosol, plastid	48.11	44.57
TraesCS4D01G038900.1	Wheat	plastid	50.81	43.93
Os03t0703400-01	Rice	plasma membrane	50.99	43.27
KRH10458	Soybean	cytosol	36.4	42.8
HORVU4Hr1G006660.1	Barley	plastid	50.63	42.45
TraesCS4A01G272500.1	Wheat	plastid	50.45	42.42
TraesCS4B01G041600.1	Wheat	plastid	50.63	42.19
Zm00001d028514_P002	Maize	plastid	48.11	40.89
Zm00001d047875_P003	Maize	plastid	47.21	40.75
HORVU4Hr1G061550.1	Barley	cytosol, plastid	47.75	38.35
AT4G08470.1	Thale cress	cytosol	38.2	37.86
AT4G08480.1	Thale cress	cytosol, plastid	49.73	35.7
CDY18021	Canola	nucleus	25.41	34.39
KRH28449	Soybean	plastid	16.4	34.34
KXG20217	Sorghum	cytosol	40.18	34.15
KRH55299	Soybean	mitochondrion	14.05	31.58
KRH26278	Soybean	cytosol	18.2	30.7
KRH55302	Soybean	plasma membrane, plastid	16.04	30.17
KRH06039	Soybean	cytosol	18.2	30.06
KRH55037	Soybean	plasma membrane	16.04	29.67
KRH74789	Soybean	nucleus	17.48	29.57
KRH28462	Soybean	plastid	18.02	28.9
KRH00952	Soybean	cytosol	14.96	28.62
KRH66431	Soybean	plastid	17.84	28.45
KRH77009	Soybean	nucleus	17.66	28.32
KRH25356	Soybean	cytosol	17.3	27.27
KRH66433	Soybean	cytosol, plastid	16.94	27.17
KRH57939	Soybean	nucleus	16.58	26.98
KRH04602	Soybean	nucleus	16.4	26.69
KRH64042	Soybean	nucleus	28.29	26.12
KRH43554	Soybean	nucleus	27.57	25.67
KRH59572	Soybean	nucleus	27.75	25.67
KRH53896	Soybean	nucleus	28.29	25.49
KRH56159	Soybean	cytosol, mitochondrion, plastid	17.66	25.45
KRH26765	Soybean	mitochondrion	18.02	25.25
KRH22583	Soybean	plastid	18.02	25.13
KRG98260	Soybean	mitochondrion	16.76	24.03
KRH05734	Soybean	cytosol, plastid	24.5	23.94
KRH36483	Soybean	cytosol, mitochondrion, plasma membrane, plastid	18.2	23.93
KRH30249	Soybean	mitochondrion	16.76	22.63
KRH61238	Soybean	cytosol, plastid	26.67	22.6
KRH51939	Soybean	mitochondrion, plastid	27.21	22.5
KRH28506	Soybean	plastid	24.32	21.67
KRG96833	Soybean	cytosol	25.23	21.28
KRH76953	Soybean	plastid	24.14	21.17
KRH68552	Soybean	cytosol	25.23	21.15
KRH04666	Soybean	plastid	24.14	21.04
KRH57740	Soybean	plastid	23.96	20.98
KRH27916	Soybean	cytosol, plastid	31.71	20.85
KRG91247	Soybean	nucleus	23.24	20.57
KRH35566	Soybean	nucleus	23.06	20.51
KRH77558	Soybean	cytosol, plastid	31.89	20.37
KRH15298	Soybean	cytosol	25.41	20.09
KRH35266	Soybean	nucleus	32.07	20.07
KRG91565	Soybean	cytosol	31.89	19.93
KRH38416	Soybean	cytosol, plastid	31.89	19.73
KRH08892	Soybean	cytosol	31.89	19.71
KRH72707	Soybean	mitochondrion	16.04	19.1
KRH17058	Soybean	cytosol, golgi, mitochondrion, nucleus, plastid	15.68	17.86
KRH41200	Soybean	cytosol	32.79	17.53
KRH24194	Soybean	cytosol	21.44	8.62
KRH29165	Soybean	cytosol	21.44	8.55

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100778553	MapMan:18.4.2.2	EMBL:ACUP02003452	EnsemblPlantsGene:GLYMA_06G108900	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0006950	GO:GO:0007049	GO:GO:0007154	GO:GO:0007165	GO:GO:0007346	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014
GO:GO:0031098	GO:GO:0032147	UniProt:I1KA48	InterPro:IPR000719	EnsemblPlants:KRH53173	ProteinID:KRH53173
ProteinID:KRH53173.1	ProteinID:KRH53174.1	ProteinID:KRH53175.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF627	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00023C3884	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:8761439..8769061

Molecular Weight (calculated)

61990.6 Da

IEP (calculated)

4.917

GRAVY (calculated)

-0.625

Length

555 amino acids

Sequence
(BLAST)

001: MDRKNPRRKP KLERRNALKY SSSEYDAGSS PSDDTLYTRS MEFYDRTSFR IEGVEGEFDR ICRSLGLSGP EDFAIPAAAW EAIKFRYSSD ILPRLKLDNL
101: DIPEEEEGEE ELKVNEDIIV NSVEEGKLSE KHGDSSSVRV RVRVRVREID ESSTGIKGTR PPMLKPPPGA RVQVVDDSTC STWDLLRDLA PQGEEGLPLN
201: RSENESEVAR EVERGAVEKE EGEVGTRESP KREEEENVAG LSESCSFSTS NEDDSSSSTT DPTSNNISPQ GRIKRIITAE SWQKGEFLGG GSFGSVYEGI
301: SDDGFFFAVK EVSLLDQGTQ GKQSVYQLEQ EIALLSQFEH ENIVQYYGTE MDQSKLYIFL ELVTKGSLRS LYQKYTLRDS QVSSYTRQIL HGLKYLHDRN
401: VVHRDIKCAN ILVDASGSVK LADFGLAKAT KLNDVKSMKG TAFWMAPEVV KGKNKGYGLP ADIWSLGCTV LEMLTGQLPY CDLESMQALY RIGKGERPRI
501: PDSLSRDAQD FILQCLQVSP NDRATAAQLL NHSFVQRPLS QSSGSSFPHI HGRKG

Best Arabidopsis Sequence Match ( AT4G08470.1 )
(BLAST)

001: MDVTAIFAGD ILVQSREYLI PNDVVDVDGG IKAVRPPIIQ PPPGRKLPLI DFPGSSWDFL TYFAPSKTVK RQSSSSSDNT SDKEEVETEE TRGMFVQLGD
101: TAHEACPFAT NEADSSSTVS IISPSYASRG SIVPSWLKRK FLGRVSLGFV YEGSSGSSVG SESTCSLMTP SLEFPDRISF RKKDFSEKGP SRHVWEKRKL
201: TRAKLIENFC NPEDIEPVTS WLKGQLLGEE SFASVYEAIS DSSVGSESTC SLMTPSMEFP DRISFRKRDF SEEGPSGRVK EKRKLMRNKL IENFRKPEDI
301: TSWLKGQLLG RGSYASVYEA ISEDGDFFAV KEVSLLDKGI QAQECIQQLE GEIALLSQLQ HQNIVRYRGT AKDVSKLYIF LELVTQGSVQ KLYERYQLSY
401: TVVSLYTRQI LAGLNYLHDK GFVHRDIKCA NMLVDANGTV KLADFGLAEA SKFNDIMSCK GTLFWMAPEV INRKDSDGNG SPADIWSLGC TVLEMCTGQI
501: PYSDLKPIQA AFKIGRGTLP DVPDTLSLDA RHFILTCLKV NPEERPTAAE LLHHPFVINL

Arabidopsis Description

MAPKKK10Mitogen-activated protein kinase kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0T3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.