CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50310.1	KRG89812	AT2G41090.1	17360592
AT3G50310.1	KRG94975	AT2G41090.1	17360592
AT3G50310.1	KRH18664	AT2G41090.1	17360592
AT3G50310.1	KRH31638	AT4G14640.1	17360592
AT3G50310.1	KRH69070	AT4G14640.1	17360592
AT3G50310.1	KRG89812	AT5G21274.1	17360592
AT3G50310.1	KRG94975	AT5G21274.1	17360592
AT3G50310.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04602	Soybean	nucleus	90.91	90.91
KRH74789	Soybean	nucleus	60.41	62.8
KRH66431	Soybean	plastid	63.93	62.64
KRH28462	Soybean	plastid	63.34	62.43
KRH77009	Soybean	nucleus	63.05	62.14
KRH28449	Soybean	plastid	44.57	57.36
AT4G36950.1	Thale cress	plastid	51.03	51.79
PGSC0003DMT400010341	Potato	cytosol	50.73	48.6
PGSC0003DMT400010342	Potato	cytosol, plastid	51.03	48.33
KRH66433	Soybean	cytosol, plastid	48.97	48.27
CDX75628	Canola	plastid	49.85	48.02
Bra011739.1-P	Field mustard	plastid	49.85	48.02
Solyc02g090980.1.1	Tomato	cytosol	49.85	47.89
AT5G67080.1	Thale cress	cytosol	48.09	47.67
CDY17760	Canola	cytosol	47.8	47.66
Solyc02g064980.1.1	Tomato	cytosol	50.15	47.63
CDX69280	Canola	plastid	49.27	47.59
Solyc02g090970.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	50.15	47.5
CDY12801	Canola	cytosol	48.09	47.4
CDY30595	Canola	cytosol	47.51	47.37
AT3G50310.1	Thale cress	cytosol	47.51	47.37
Bra036070.1-P	Field mustard	cytosol	47.51	47.37
PGSC0003DMT400010340	Potato	nucleus	49.85	47.22
PGSC0003DMT400065492	Potato	nucleus	49.27	47.19
VIT_07s0031g00530.t01	Wine grape	mitochondrion	51.03	47.15
CDY01441	Canola	cytosol	47.8	47.11
Solyc02g090990.1.1	Tomato	cytosol	48.97	46.91
CDX83120	Canola	cytosol	46.33	46.61
Bra030001.1-P	Field mustard	cytosol	46.33	46.61
Bra012131.1-P	Field mustard	cytosol	47.21	46.53
GSMUA_Achr9P21940_001	Banana	cytosol, mitochondrion, peroxisome, plastid	45.45	39.04
KRH55299	Soybean	mitochondrion	28.15	38.87
KRH55037	Soybean	plasma membrane	34.02	38.67
KRH55302	Soybean	plasma membrane, plastid	33.14	38.31
KRH00952	Soybean	cytosol	32.26	37.93
KRH25356	Soybean	cytosol	37.54	36.36
GSMUA_Achr4P13370_001	Banana	cytosol	46.92	33.83
KRH56159	Soybean	cytosol, mitochondrion, plastid	37.54	33.25
KRH26278	Soybean	cytosol	31.67	32.83
KRH06039	Soybean	cytosol	31.96	32.44
KRH22583	Soybean	plastid	37.83	32.41
KRH26765	Soybean	mitochondrion	37.54	32.32
KRG98260	Soybean	mitochondrion	34.6	30.49
KRH36483	Soybean	cytosol, mitochondrion, plasma membrane, plastid	37.54	30.33
KRH30249	Soybean	mitochondrion	34.31	28.47
KRH72707	Soybean	mitochondrion	34.9	25.54
KRH17058	Soybean	cytosol, golgi, mitochondrion, nucleus, plastid	34.02	23.82
KRH10459	Soybean	cytosol	28.45	22.05
KRH42244	Soybean	cytosol	26.98	19.57
KRH58364	Soybean	cytosol, plastid	28.15	19.2
KRH43554	Soybean	nucleus	31.67	18.12
KRH64042	Soybean	nucleus	31.67	17.97
KRH59572	Soybean	nucleus	31.38	17.83
KRH10458	Soybean	cytosol	24.34	17.58
KRH53896	Soybean	nucleus	31.09	17.21
KRH16614	Soybean	mitochondrion	26.98	16.64
KRH53173	Soybean	nucleus	26.98	16.58
KRH16616	Soybean	nucleus	27.86	16.1
KRH64744	Soybean	nucleus	26.69	16.08
KRH05734	Soybean	cytosol, plastid	26.69	16.02
KRH18819	Soybean	nucleus	27.86	15.99
KRH28506	Soybean	plastid	28.74	15.73
KRH76953	Soybean	plastid	29.03	15.64
KRG96833	Soybean	cytosol	29.91	15.5
KRH68552	Soybean	cytosol	29.91	15.41
KRG91247	Soybean	nucleus	27.86	15.15
KRH35566	Soybean	nucleus	27.57	15.06
KRH57740	Soybean	plastid	27.57	14.83
KRH04666	Soybean	plastid	27.27	14.6
KRH61238	Soybean	cytosol, plastid	25.22	13.13
KRH51939	Soybean	mitochondrion, plastid	25.81	13.11
KRH15298	Soybean	cytosol	26.98	13.11
KRH27916	Soybean	cytosol, plastid	29.62	11.97
KRH35266	Soybean	nucleus	30.79	11.84
KRG91565	Soybean	cytosol	30.79	11.82
KRH08892	Soybean	cytosol	30.79	11.69
KRH77558	Soybean	cytosol, plastid	29.62	11.62
KRH38416	Soybean	cytosol, plastid	30.21	11.48
KRH41200	Soybean	cytosol	30.21	9.92
KRH24194	Soybean	cytosol	27.57	6.81
KRH29165	Soybean	cytosol	27.57	6.75

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100799752	MapMan:18.4.2.2	EMBL:ACUP02003162	EnsemblPlantsGene:GLYMA_05G094400	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0006950	GO:GO:0007049	GO:GO:0007154	GO:GO:0007165	GO:GO:0007346	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014
GO:GO:0031098	GO:GO:0032147	UniProt:I1K249	InterPro:IPR000719	EnsemblPlants:KRH57939	ProteinID:KRH57939
ProteinID:KRH57939.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24361	PANTHER:PTHR24361:SF334	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233A262	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:23987218..23988243

Molecular Weight (calculated)

38023.6 Da

IEP (calculated)

4.880

GRAVY (calculated)

-0.440

Length

341 amino acids

Sequence
(BLAST)

001: MDWVRGDALG RGSFATVSLA IPTTNPNQFP SLTAVKSAEA QTSCWLRNEK HVLDRLGSSS PRIIRCFGDD CSFENGVEYY NLFLEYAAGG SLADELKNHD
101: GQISEHEARE YTRAIVEGLS HVHKSGFVHC DIKLQNILVF GDGGIKIADF GLAREAGQKQ EKSECRGTPM FMSPEQATGG ECESPADIWA LGCTIVEMVT
201: GKPAWQVEKG ASMWSLLLRI GVGEEVPEIP NNLSEDGKDF IEKCFIKDPK KRWSAEMLLK HPFLINDGTV PFKRVHESPR SHFDFPDWVS SVTNSLPSSP
301: EFQDKWDFDD GFCSPEDRLR QLLTVNRPAS WSESDGWSSV R

Best Arabidopsis Sequence Match ( AT4G36950.1 )
(BLAST)

001: MEWIRRETIG HGSFSTVSLA TTSGSSSKAF PSLMAVKSSG VVCSAALRNE RDVLDDLGDC SEIVRCFGEG RTVENGEEIY NLFLEYASGG SLADRIKSSG
101: EALPEFEVRR FTRSIVKGLC HIHGNGFTHC DIKLENVLVF GDGDVKISDF GLAKRRSGEV CVEIRGTPLY MAPESVNHGE FESPADIWAL GCSVVEMSSG
201: KTAWCLEDGV MNNVMSLLVR IGSGDEVPRI PVELSEEGKD FVSKCFVKNA AERWTAEMLL DHPFLAVDDE SGEEDEACSV SPRNPFDFPG WNSVQSPVND
301: SVMFGSLVGS PEERISGLVS EKVPDWSVSC DWVNVR

Arabidopsis Description

MAPKKK21Mitogen-activated protein kinase kinase kinase 21 [Source:UniProtKB/TrEMBL;Acc:Q6K1M3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.