CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
nucleus 1
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75628	Canola	plastid	94.62	94.35
AT4G36950.1	Thale cress	plastid	77.05	80.95
CDY17760	Canola	cytosol	54.39	56.14
CDY30595	Canola	cytosol	53.54	55.26
CDX83120	Canola	cytosol	52.97	55.16
CDY12801	Canola	cytosol	53.82	54.91
CDY01441	Canola	cytosol	53.82	54.91
KRH28462	Soybean	plastid	49.29	50.29
KRH77009	Soybean	nucleus	49.01	50.0
KRH66431	Soybean	plastid	49.29	50.0
KRH04602	Soybean	nucleus	48.16	49.85
KRH74789	Soybean	nucleus	46.18	49.7
KRH57939	Soybean	nucleus	47.59	49.27
KRH28449	Soybean	plastid	36.83	49.06
PGSC0003DMT400065492	Potato	nucleus	47.31	46.91
PGSC0003DMT400010342	Potato	cytosol, plastid	47.31	46.39
Solyc02g064980.1.1	Tomato	cytosol	47.03	46.24
Solyc02g090970.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	45.89	45.0
VIT_07s0031g00530.t01	Wine grape	mitochondrion	47.03	44.99
PGSC0003DMT400010341	Potato	cytosol	44.19	43.82
PGSC0003DMT400010340	Potato	nucleus	43.91	43.06
Solyc02g090990.1.1	Tomato	cytosol	43.34	42.98
Solyc02g090980.1.1	Tomato	cytosol	43.06	42.82
KRH66433	Soybean	cytosol, plastid	39.66	40.46
GSMUA_Achr9P21940_001	Banana	cytosol, mitochondrion, peroxisome, plastid	43.06	38.29
CDY53387	Canola	cytosol, plasma membrane, plastid	33.99	35.61
CDY18290	Canola	nucleus, plasma membrane, plastid	33.71	35.31
GSMUA_Achr4P13370_001	Banana	cytosol	46.46	34.67
CDX97370	Canola	plastid	38.81	33.99
CDY18020	Canola	cytosol	7.37	33.33
CDY19144	Canola	mitochondrion	33.43	33.05
CDY52049	Canola	mitochondrion	32.86	32.68
CDY12200	Canola	mitochondrion	32.86	31.78
CDY17301	Canola	cytosol	37.96	31.09
CDY42094	Canola	cytosol	32.58	30.59
CDY19916	Canola	cytosol	37.96	30.04
CDY20789	Canola	cytosol	37.96	29.58
CDX89295	Canola	plastid	38.24	29.48
CDY39740	Canola	cytosol	16.43	29.29
CDY29258	Canola	cytosol	30.31	28.92
CDY36728	Canola	cytosol	37.39	28.82
CDY66991	Canola	cytosol	23.51	28.52
CDY14295	Canola	plastid	37.96	28.45
CDY69540	Canola	cytosol	36.26	28.38
CDY07592	Canola	mitochondrion	26.35	28.01
CDY08107	Canola	mitochondrion	25.78	27.74
CDY05900	Canola	mitochondrion	26.35	27.68
CDY20266	Canola	cytosol	12.18	27.39
CDY06612	Canola	cytosol	37.39	27.39
CDY10252	Canola	plastid	34.28	26.59
CDY36607	Canola	cytosol	24.65	26.44
CDX80352	Canola	plastid	33.14	25.66
CDX97857	Canola	cytosol, plasma membrane, plastid	32.86	25.44
CDX86063	Canola	nucleus	26.91	25.27
CDX84864	Canola	plastid	33.14	24.95
CDY24072	Canola	cytosol	24.93	24.72
CDX68367	Canola	nucleus	28.05	24.63
CDY52115	Canola	plastid	32.58	23.47
CDY02024	Canola	cytosol, plastid	32.86	23.39
CDY10704	Canola	cytosol, plastid	32.29	22.89
CDX99124	Canola	nucleus	23.23	21.69
CDY24036	Canola	cytosol	33.43	21.0
CDY49844	Canola	nucleus	23.8	20.19
CDY52152	Canola	cytosol	9.92	16.75
CDY69517	Canola	cytosol	25.5	16.39
CDY34000	Canola	cytosol	25.21	16.18
CDY36198	Canola	cytosol	26.06	16.0
CDX75154	Canola	cytosol	26.35	15.37
CDX89612	Canola	nucleus	23.23	14.16
CDX95018	Canola	cytosol	25.5	13.85
CDX93120	Canola	nucleus	23.23	13.83
CDX93524	Canola	nucleus	25.21	13.69
CDY01459	Canola	cytosol	26.35	13.54
CDY12781	Canola	cytosol	26.63	13.49
CDY27717	Canola	cytosol	23.51	12.77
CDY05223	Canola	cytosol	23.8	12.71
CDY08319	Canola	nucleus	26.91	10.92
CDY45350	Canola	nucleus	26.91	10.92
CDY18021	Canola	nucleus	10.2	8.78
CDY43937	Canola	cytosol	4.53	8.25
CDY07086	Canola	cytosol	22.1	6.98
CDY24178	Canola	cytosol	22.1	6.79
CDX74018	Canola	cytosol	23.23	6.31
CDY07961	Canola	cytosol	23.23	6.3
CDX75717	Canola	cytosol	23.8	6.21
CDX82534	Canola	cytosol	23.51	6.15
CDY23615	Canola	cytosol	1.42	3.79
CDY59256	Canola	extracellular	1.13	2.2

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.2	GO:A0A078BWU5	EnsemblPlants:CDX69280	ProteinID:CDX69280	ProteinID:CDX69280.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00131100001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF334	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE951C	SEG:seg

Description

BnaC01g01730D

Coordinates

chrLK031789:+:3867621..3868682

Molecular Weight (calculated)

38603.3 Da

IEP (calculated)

4.610

GRAVY (calculated)

-0.247

Length

353 amino acids

Sequence
(BLAST)

001: MEWVRRETIG HGSFSTVTLA TTSGSSTSFP PLIAVKSSGA VCSAALRNER DVLDDLGHCS EIVRCFGGGT TVENGEEVYN LFLEYASGGN LGDRIKNSGE
101: GLPELEVRRF TRSIVKGLRH VHKNGYSHCD VKLENVLVFG DEGVKISDFG LAKRKGETAD GIRGTPLYLA PEAVNRGEFE SPADVWALGW CVVEMSSGKT
201: AWCLEEGVGN VMSLMVRIGS GDVPKIPVEL SEEGKDFVRR CFVKDPVERW TAQMLLDHPF LAVDHDDERS SGSLRCGDED EASVSPRDPF DFPDWNSVND
301: SVTVCSPVNY SPFSYLVRLP EERISGLVSG NVPDWSVSCD WVNVREVKGS TVV

Best Arabidopsis Sequence Match ( AT4G36950.1 )
(BLAST)

001: MEWIRRETIG HGSFSTVSLA TTSGSSSKAF PSLMAVKSSG VVCSAALRNE RDVLDDLGDC SEIVRCFGEG RTVENGEEIY NLFLEYASGG SLADRIKSSG
101: EALPEFEVRR FTRSIVKGLC HIHGNGFTHC DIKLENVLVF GDGDVKISDF GLAKRRSGEV CVEIRGTPLY MAPESVNHGE FESPADIWAL GCSVVEMSSG
201: KTAWCLEDGV MNNVMSLLVR IGSGDEVPRI PVELSEEGKD FVSKCFVKNA AERWTAEMLL DHPFLAVDDE SGEEDEACSV SPRNPFDFPG WNSVQSPVND
301: SVMFGSLVGS PEERISGLVS EKVPDWSVSC DWVNVR

Arabidopsis Description

MAPKKK21Mitogen-activated protein kinase kinase kinase 21 [Source:UniProtKB/TrEMBL;Acc:Q6K1M3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.