CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50310.1	KRG89812	AT2G41090.1	17360592
AT3G50310.1	KRG94975	AT2G41090.1	17360592
AT3G50310.1	KRH18664	AT2G41090.1	17360592
AT3G50310.1	KRH31638	AT4G14640.1	17360592
AT3G50310.1	KRH69070	AT4G14640.1	17360592
AT3G50310.1	KRG89812	AT5G21274.1	17360592
AT3G50310.1	KRG94975	AT5G21274.1	17360592
AT3G50310.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28449	Soybean	plastid	72.54	94.72
KRH66431	Soybean	plastid	57.23	56.9
KRH28462	Soybean	plastid	56.65	56.65
KRH77009	Soybean	nucleus	56.36	56.36
KRH74789	Soybean	nucleus	53.18	56.1
KRH57939	Soybean	nucleus	48.27	48.97
KRH04602	Soybean	nucleus	46.53	47.21
AT4G36950.1	Thale cress	plastid	42.2	43.45
CDX83120	Canola	cytosol	42.49	43.36
Bra030001.1-P	Field mustard	cytosol	42.49	43.36
CDY12801	Canola	cytosol	43.06	43.06
AT5G67080.1	Thale cress	cytosol	42.2	42.44
AT3G50310.1	Thale cress	cytosol	41.91	42.4
Bra036070.1-P	Field mustard	cytosol	41.62	42.11
CDY30595	Canola	cytosol	41.62	42.11
CDY17760	Canola	cytosol	41.62	42.11
CDY01441	Canola	cytosol	41.91	41.91
Bra012131.1-P	Field mustard	cytosol	41.91	41.91
CDX75628	Canola	plastid	41.33	40.4
Bra011739.1-P	Field mustard	plastid	41.33	40.4
PGSC0003DMT400010342	Potato	cytosol, plastid	41.33	39.72
CDX69280	Canola	plastid	40.46	39.66
Solyc02g090970.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	41.04	39.44
PGSC0003DMT400010340	Potato	nucleus	40.75	39.17
Solyc02g090980.1.1	Tomato	cytosol	40.17	39.15
PGSC0003DMT400065492	Potato	nucleus	39.88	38.76
Solyc02g090990.1.1	Tomato	cytosol	39.6	38.48
PGSC0003DMT400010341	Potato	cytosol	39.31	38.2
Solyc02g064980.1.1	Tomato	cytosol	39.6	38.16
KRH55299	Soybean	mitochondrion	27.17	38.06
KRH55037	Soybean	plasma membrane	32.95	38.0
KRH55302	Soybean	plasma membrane, plastid	32.37	37.97
KRH00952	Soybean	cytosol	31.21	37.24
VIT_07s0031g00530.t01	Wine grape	mitochondrion	38.15	35.77
GSMUA_Achr9P21940_001	Banana	cytosol, mitochondrion, peroxisome, plastid	40.46	35.26
KRH06039	Soybean	cytosol	30.92	31.85
KRH26278	Soybean	cytosol	29.77	31.31
KRH25356	Soybean	cytosol	31.79	31.25
KRH36483	Soybean	cytosol, mitochondrion, plasma membrane, plastid	34.1	27.96
KRH56159	Soybean	cytosol, mitochondrion, plastid	30.92	27.79
GSMUA_Achr4P13370_001	Banana	cytosol	36.99	27.06
KRH22583	Soybean	plastid	29.48	25.63
KRH26765	Soybean	mitochondrion	29.19	25.51
KRG98260	Soybean	mitochondrion	27.17	24.29
KRH30249	Soybean	mitochondrion	27.17	22.87
KRH10459	Soybean	cytosol	27.75	21.82
KRH72707	Soybean	mitochondrion	28.03	20.82
KRH42244	Soybean	cytosol	26.59	19.57
KRH17058	Soybean	cytosol, golgi, mitochondrion, nucleus, plastid	27.17	19.3
KRH58364	Soybean	cytosol, plastid	27.17	18.8
KRH53173	Soybean	nucleus	27.17	16.94
KRH64042	Soybean	nucleus	28.9	16.64
KRH64744	Soybean	nucleus	26.88	16.43
KRH43554	Soybean	nucleus	28.03	16.28
KRH16614	Soybean	mitochondrion	26.01	16.27
KRH59572	Soybean	nucleus	28.03	16.17
KRH05734	Soybean	cytosol, plastid	26.3	16.02
KRH53896	Soybean	nucleus	28.32	15.91
KRH10458	Soybean	cytosol	21.68	15.89
KRH16616	Soybean	nucleus	26.59	15.59
KRH35566	Soybean	nucleus	27.75	15.38
KRH18819	Soybean	nucleus	26.3	15.32
KRH28506	Soybean	plastid	27.46	15.25
KRG96833	Soybean	cytosol	28.9	15.2
KRG91247	Soybean	nucleus	27.46	15.15
KRH68552	Soybean	cytosol	28.9	15.11
KRH76953	Soybean	plastid	27.46	15.01
KRH57740	Soybean	plastid	25.72	14.04
KRH04666	Soybean	plastid	25.72	13.97
KRH61238	Soybean	cytosol, plastid	24.57	12.98
KRH15298	Soybean	cytosol	26.3	12.96
KRH51939	Soybean	mitochondrion, plastid	24.57	12.67
KRH35266	Soybean	nucleus	29.48	11.5
KRG91565	Soybean	cytosol	29.48	11.49
KRH38416	Soybean	cytosol, plastid	29.48	11.37
KRH08892	Soybean	cytosol	29.48	11.36
KRH27916	Soybean	cytosol, plastid	27.17	11.14
KRH77558	Soybean	cytosol, plastid	27.17	10.82
KRH41200	Soybean	cytosol	27.17	9.06
KRH24194	Soybean	cytosol	25.14	6.3
KRH29165	Soybean	cytosol	25.14	6.25

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.2	UniProt:A0A0R0KHR8	EMBL:ACUP02001961	EnsemblPlantsGene:GLYMA_03G106200	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0006950	GO:GO:0007049	GO:GO:0007154	GO:GO:0007165	GO:GO:0007346	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014
GO:GO:0031098	GO:GO:0032147	InterPro:IPR000719	EnsemblPlants:KRH66433	ProteinID:KRH66433	ProteinID:KRH66433.1
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF334	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0006ED55F2

Description

hypothetical protein

Coordinates

chr3:+:30416907..30419374

Molecular Weight (calculated)

38509.9 Da

IEP (calculated)

9.273

GRAVY (calculated)

-0.403

Length

346 amino acids

Sequence
(BLAST)

001: MKKNWVRGES LGSGSAATVN IVIPTNPSTH NFPSPTAVKS SLFLTSYSLK TEKDVLDILG PSPNIIKCYG NDCTVENGKR YYNVFLEYAA GGSLADQLKK
101: YGGRFPEACV RQCTKSILEG LKHIHSKGYV HCDVKPQNIL VFDNGVVKIA DLGLAKRRGE INREYVCRGT PMYMSPESLT DNVYESPVDI WALGCTIVEM
201: ITGEHAWYVG SCENTWTLMN RIGIGEELPK IPQELSQQGK DFLGKCLVKD PNKRWTAHML LNHPFIKNPL PQPLPRKTDR PACMPKGIPC THQAKMGEGK
301: DFLDKCPGKS ATPACMPKGI PCTHQDKMRR HCIKVVVMKR KSTLSR

Best Arabidopsis Sequence Match ( AT3G50310.1 )
(BLAST)

001: MEWVRGETIG FGTFSTVSTA TKSRNSGDFP ALIAVKSTDA YGAASLSNEK SVLDSLGDCP EIIRCYGEDS TVENGEEMHN LLLEYASRGS LASYMKKLGG
101: EGLPESTVRR HTGSVLRGLR HIHAKGFAHC DIKLANILLF NDGSVKIADF GLAMRVDGDL TALRKSVEIR GTPLYMAPEC VNDNEYGSAA DVWALGCAVV
201: EMFSGKTAWS VKEGSHFMSL LIRIGVGDEL PKIPEMLSEE GKDFLSKCFV KDPAKRWTAE MLLNHSFVTI DLEDDHRENF VVKVKDEDKV LMSPKCPFEF
301: DDWDSFTLDS NPSFDSPVER LGSLVSGSIP DWSVGGSWLT VR

Arabidopsis Description

MAPKKK20MKKK20 [Source:UniProtKB/TrEMBL;Acc:A0A178VGW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.